prot_M-pyrifera_M_contig72880.17308.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72880.17308.1
Unique Nameprot_M-pyrifera_M_contig72880.17308.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length302
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72880.17308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 192..227
e-value: 1.1E-15
score: 68.0
coord: 264..299
e-value: 3.4E-14
score: 63.2
coord: 228..263
e-value: 1.7E-15
score: 67.5
coord: 12..47
e-value: 4.0E-13
score: 59.6
coord: 84..119
e-value: 3.0E-13
score: 60.0
coord: 120..155
e-value: 1.1E-13
score: 61.5
coord: 156..191
e-value: 8.8E-11
score: 51.8
coord: 48..83
e-value: 5.3E-12
score: 55.9
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 264..299
e-value: 2.2E-11
score: 44.1
coord: 84..119
e-value: 9.3E-10
score: 38.9
coord: 12..47
e-value: 1.6E-9
score: 38.1
coord: 48..83
e-value: 3.0E-9
score: 37.3
coord: 120..155
e-value: 3.5E-11
score: 43.4
coord: 192..227
e-value: 1.3E-13
score: 51.1
coord: 156..191
e-value: 9.1E-10
score: 38.9
coord: 2..11
e-value: 1.2
score: 9.9
coord: 228..263
e-value: 3.7E-13
score: 49.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 170..302
e-value: 2.2E-59
score: 203.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..155
e-value: 4.1E-65
score: 222.0
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 143..300
coord: 1..172
coord: 107..247
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 2..163
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 142..300
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..285
score: 9.516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72880contigM-pyrifera_M_contig72880:205..1110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72880.17308.1mRNA_M-pyrifera_M_contig72880.17308.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72880 184..1110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72880.17308.1 ID=prot_M-pyrifera_M_contig72880.17308.1|Name=mRNA_M-pyrifera_M_contig72880.17308.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=302bp
MWFQKAADQGDARAQTSLGRMYRDGQGVEKNDATAVKWYRKAAEQGHASA
QTSLGFMYSNGQGVEKNDATAAMWYQKAAEQGDAEAQYYLGWIYEFGQGV
EKNDATAVKWYRKAAVQGDADAQTNLGCMYRDGQGVEKNDATAVKWFQKA
AEQGHAEAQFRVGRMFRKGYGETKNDKAAVKWYQKAADQGHAEAQYFLGW
MYHNGQGVEKNDETAVKWFQKAAEQGHAEAQYFLGWMYHNGQGVEKNDET
AVKWYRKAAEQGDAEAQTNLGVMYESGQGVEKNDATAVKWYRRAAEQGHA
RG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf
IPR020683Ankyrin_rpt-contain_dom