prot_M-pyrifera_M_contig71937.17133.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig71937.17133.1
Unique Nameprot_M-pyrifera_M_contig71937.17133.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length345
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71937.17133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032689TraD/TraG, TraM recognition sitePFAMPF12696TraG-D_Ccoord: 268..343
e-value: 7.3E-6
score: 26.0
NoneNo IPR availableGENE3D3.40.50.300coord: 196..345
e-value: 4.0E-12
score: 47.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71937contigM-pyrifera_M_contig71937:43..1077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71937.17133.1mRNA_M-pyrifera_M_contig71937.17133.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig71937 43..1077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig71937.17133.1 ID=prot_M-pyrifera_M_contig71937.17133.1|Name=mRNA_M-pyrifera_M_contig71937.17133.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=345bp
VLLAEELRVNGLWLLGAMRSGKTALATSLGVQLARRNHGPLILVDLKGDD
ETMQTYRWEADRLGRPFQLFSTVPEHPTHLFNVLGQRHLDGLTPSEIAQL
IMLSADLDHGSGHGPSFFRGQSWTGLSEGLVAETGRGWRPSQTRERVQSF
VELSRRLPEVAKARKELKHLEALTVVVNQLCQVATLNGIRGLKWFPEEAM
RESIQIRNLFFPNAEGKYPIVYLYLRAESDPIVAPMIARLFLNLTKNGLR
QFTDARKQGRVQAPPVLVDVIIDEAAYVLDRSLRNLIDQGASMGFRMILA
NQDISQIAGDDPNFARTLFENIGNKVLFTCRDATWQDTLMKLSGE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032689TraG-D_C
IPR027417P-loop_NTPase