prot_M-pyrifera_M_contig7080.16901.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig7080.16901.1
Unique Name	prot_M-pyrifera_M_contig7080.16901.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	38

Homology

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BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot
Match: A0A6H5L6L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L5_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 7.370e-8
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0

Query:    1 FLRNSSVARASFLGYLLLLHLWAFAVLGFHHSNME 35
            FLRNSSVARA+FL YLLLLHLW FAV+G H S + 
Sbjct:  900 FLRNSSVARAAFLAYLLLLHLWTFAVVGLHSSTLN 934

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BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot
Match: D8LSA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA0_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 4.320e-6
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0

Query:    1 FLRNSSVARASFLGYLLLLHLWAFAVLGFHHSNME 35
            FLRNSSVARA+FL YLLLLHL AFA++G H S + 
Sbjct:  861 FLRNSSVARAAFLAYLLLLHLSAFALVGLHSSTLN 895

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BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot
Match: A0A024UK16_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK16_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.890e-5
Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 0

Query:    1 FLRNSSVARASFLGYLLLLHLWAFAVLGFHHSNMEQPI 38
            FLR    AR + LGYL+LLHLWAF +LGFH S++ + +
Sbjct:  546 FLRAYPEARLALLGYLVLLHLWAFVILGFHTSHLNEEV 583

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BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot
Match: A0A397D1J3_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D1J3_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 9.950e-5
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 0

Query:    1 FLRNSSVARASFLGYLLLLHLWAFAVLGFHHSNMEQPI 38
            FLR    AR   LGYL+LLHLWAF +LGFH S++   +
Sbjct:  758 FLRAYPEARLGLLGYLVLLHLWAFVILGFHTSHLSDEV 795

[Close]

BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot
Match: W4H6P5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6P5_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 9.980e-5
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 0

Query:    1 FLRNSSVARASFLGYLLLLHLWAFAVLGFHHSNMEQPI 38
            FLR    AR   LGYL+LLHLWAF +LGFH S++   +
Sbjct:  519 FLRAYPEARLGLLGYLVLLHLWAFVILGFHTSHLSDEV 556

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7080.16901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5L6L5_9PHAE	7.370e-8	74.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LSA0_ECTSI	4.320e-6	71.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A024UK16_9STRA	3.890e-5	55.26	Uncharacterized protein n=4 Tax=Aphanomyces invada...	[more]
A0A397D1J3_9STRA	9.950e-5	55.26	Uncharacterized protein n=3 Tax=Aphanomyces astaci...	[more]
W4H6P5_9STRA	9.980e-5	55.26	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..38
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7080	contig	M-pyrifera_M_contig7080:332..445 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7080.16901.1	mRNA_M-pyrifera_M_contig7080.16901.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig7080 332..445 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig7080.16901.1 ID=prot_M-pyrifera_M_contig7080.16901.1|Name=mRNA_M-pyrifera_M_contig7080.16901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
FLRNSSVARASFLGYLLLLHLWAFAVLGFHHSNMEQPI