mRNA_M-pyrifera_M_contig68584.16500.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A2P4XVZ1_9STRA (Magnesium transporter n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4XVZ1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.900e-11 Identity = 37/109 (33.94%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRN 468
E AE+L+E+YL + + ++ + E + L+L + RN LL ++++ +L + +L++ + G+FGMNLASGVE + WF GVA+S V+A + + +L+ R
Sbjct: 329 EEAEVLIETYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEEAWGWFWGVAISCVVAFVVITIVGILFFRQ 437
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: G4YYG1_PHYSP (Magnesium transporter n=4 Tax=Phytophthora TaxID=4783 RepID=G4YYG1_PHYSP) HSP 1 Score: 69.7 bits (169), Expect = 6.490e-11 Identity = 37/109 (33.94%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRN 468
E AE+L+E+YL + + ++ + E + L+L + RN LL ++++ +L + +L++ + G+FGMNLASGVE + WF GVA++ V+A I + +L+ R
Sbjct: 321 EEAEVLIENYLQDIFSTRTQADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLMTISLSVGTLLAGVFGMNLASGVEEAWGWFWGVAITCVVAFIVITAIGILFFRQ 429
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A3R7K695_9STRA (Magnesium transporter n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K695_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.570e-11 Identity = 37/109 (33.94%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRN 468
E AE+L+E+YL + E ++ + E + L+L + RN LL ++++ +L + +L++ + G+FGMNLASGVE + WF GVA++ V+A I + +L+ +
Sbjct: 331 EEAEVLIENYLQDIFSTRTQAELMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLMTISLSVGTLLAGVFGMNLASGVEEAWGWFWGVAITCVVAFIVITLAGILFFKQ 439
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: D0NXE8_PHYIT (Magnesium transporter n=17 Tax=Phytophthora TaxID=4783 RepID=D0NXE8_PHYIT) HSP 1 Score: 68.9 bits (167), Expect = 1.200e-10 Identity = 36/109 (33.03%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRN 468
E AE+L+E+YL + + ++ + E + L+L + RN LL ++++ +L + +L++ + G+FGMNLASGVE + WF GVA++ V+ I + +L+ R
Sbjct: 315 EEAEVLIENYLQDIFSTRTKADLMQQRITNTESLVMLKLDSMRNYLLRVDLIFSLVTISLSVGTLLAGVFGMNLASGVEEAWGWFWGVAITCVVVFIVITAIGILFFRQ 423
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: H3GFC9_PHYRM (Magnesium transporter n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFC9_PHYRM) HSP 1 Score: 68.2 bits (165), Expect = 2.280e-10 Identity = 34/109 (31.19%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRN 468
E AE+L+E+YL + + ++ + E + L+L + RN LL ++++ +L + +L++ + G+FGMNLASGVE + WF GVA++ V+A + + +++ +
Sbjct: 339 EEAEVLIENYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEDAWGWFWGVAITCVVAFVVITLMGVMFFKQ 447
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A2G5BEV8_COERN (Magnesium transporter n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BEV8_COERN) HSP 1 Score: 67.4 bits (163), Expect = 4.400e-10 Identity = 41/121 (33.88%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 115 AEHEINSAQERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRNSLE 477
A H E E+++E+YL +++ E++ +++ ED +N+ L + RNSLL LE+ LT+ + AL+ + G+FGMNL + ES PN F V+ ++ + IAL L R L
Sbjct: 399 ATHRETDDHEEVELMMETYLKQVEEIVNHIESVSSHVRTTEDVVNIILDSQRNSLLLLEIRLTILTVALSSGTFLSGLFGMNLINSFESHPNAFIAVSAIALFSIIALTVTGLRSMRKVLR 519
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A250XNN5_9CHLO (Magnesium transporter n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XNN5_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 7.670e-10 Identity = 35/112 (31.25%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 127 INSAQERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYS 462
+ S E+LLE+Y + + + L +K ED +N++L RN L+ +++LT + +A+I I G+FGMNL SG++ SPN F V +++ + + L F++++
Sbjct: 313 VESEVAEVEMLLETYFMHYDNTYNRLKTLNEYIKDTEDLVNIKLDQHRNQLITTDLILTALTCGMAIITTISGIFGMNLDSGLQVSPNVFNEVTIATCLGALILFVAFIIFA 424
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A662WV23_9STRA (Magnesium transporter n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV23_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.050e-9 Identity = 34/109 (31.19%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFFFLLYSRN 468
E AE+L+E+YL + ++ + E + L+L + RN LL ++++ +L +L++ I G+FGMNLASG+E + WF GV +++V+A + + +L+ +
Sbjct: 322 EEAEVLIENYLQDIFTTRTKADLMQHRITNTESLVMLKLDSMRNYLLGVDLIFSLIVISLSVGTLIAGVFGMNLASGIEDAGGWFWGVVITTVVAFLVITTIGILFFKQ 430
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A7S2ZZK0_9RHOD (Magnesium transporter n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZK0_9RHOD) HSP 1 Score: 65.5 bits (158), Expect = 1.760e-9 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 142 ERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFF-----FLLYSR 465
E E++ E+YL ++L+ ++ +++ E+ + +RL AARN +L LEV L L + +LA A G+FGMNL SG E P F VSS + G +++FF +L Y R
Sbjct: 259 EDVEMMFETYLKQVDSILNEIRSIAKEVEVTENVIQIRLDAARNKILRLEVYLNLATMSLAAGALFAGLFGMNLTSGYEEHPYAF--YIVSSSLLGSSVLFFKGSMAYLRYKR 369
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Match: A0A2T9YN22_9FUNG (Magnesium transporter n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9YN22_9FUNG) HSP 1 Score: 63.2 bits (152), Expect = 2.460e-9 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 136 AQERAEILLESYLSSFGAVLHLGEALEGNLKMAEDQLNLRLAAARNSLLHLEVLLTLTSTALALIAAIGGMFGMNLASGVESSPNWFTGVAVSSVIAGIALVFF 447
+ E E+LLE+YL + + E++ LK ED +N+ L + RNSL+ LE+ LT+ + AL + I +FGMNL SG E P F + + ++ + L F
Sbjct: 65 SHEEIELLLEAYLKQVEEIANQVESISSQLKTTEDVVNIILDSQRNSLMLLEIRLTVLAVALGVGTFITSLFGMNLFSGFEEHPVAFYSITLVTITLALTLAGF 168 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68584.16500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68584.16500.1 >prot_M-pyrifera_M_contig68584.16500.1 ID=prot_M-pyrifera_M_contig68584.16500.1|Name=mRNA_M-pyrifera_M_contig68584.16500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp MGLLHRSMSMGSAEEERVGLPSGEEVCERLGLPRTPADAEHEINSAQERAback to top mRNA from alignment at M-pyrifera_M_contig68584:713..1201- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68584.16500.1 ID=mRNA_M-pyrifera_M_contig68584.16500.1|Name=mRNA_M-pyrifera_M_contig68584.16500.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig68584:713..1201- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68584:713..1201- >mRNA_M-pyrifera_M_contig68584.16500.1 ID=mRNA_M-pyrifera_M_contig68584.16500.1|Name=mRNA_M-pyrifera_M_contig68584.16500.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig68584:713..1201- (Macrocystis pyrifera P11B4 male)back to top |