prot_M-pyrifera_M_contig67172.16251.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67172.16251.1
Unique Nameprot_M-pyrifera_M_contig67172.16251.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length89
Homology
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Match: A0A6H5JPT0_9PHAE (Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT0_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.550e-44
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    8 KVFKEGGVIYLEVVMVDRNKGKMDRTSYWGRRFETLCVLGVEGARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMG-EGDAC 89
            KVFKEGGVIYLEVVM +RN+GK+DRTSYWGRRFETLCVLGVEGARLDELQRGP D PRPSYC LYRSR+G+HN+LMG E DAC
Sbjct:   79 KVFKEGGVIYLEVVMTNRNQGKLDRTSYWGRRFETLCVLGVEGARLDELQRGPGDLPRPSYCGLYRSRLGSHNLLMGAEIDAC 161          
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Match: D8LT56_ECTSI (Decapping nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT56_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 4.250e-43
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    7 LKVFKEGGVIYLEVVMVDRNKGKMDRTSYWGRRFETLCVLGVEGARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMG-EGDAC 89
            ++VFKEGGVIYLEVVM +RN+GK+DRTSYWGRRFETLCVLGVEGARLDELQRGP D PRPSYC LYRSR+G+HN+LMG E DAC
Sbjct:  202 MEVFKEGGVIYLEVVMTNRNQGKLDRTSYWGRRFETLCVLGVEGARLDELQRGPGDLPRPSYCGLYRSRLGSHNLLMGAEIDAC 285          
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Match: UPI001CB947C1 (NAD-capped RNA hydrolase DXO1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB947C1)

HSP 1 Score: 60.1 bits (144), Expect = 1.450e-8
Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    5 PW-LKVFKEGGVIYLEV-VMVDRNKGKMDRT-SYWGRRFETLCVLGVEGARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMG-EGDAC 89
            PW + V K  GV+YL+V  + +R +G  DR  SYWG  FETL     E  R D+ +   D      YCA+ ++++G H +LMG E D C
Sbjct:  310 PWEMGVHKRKGVVYLDVHKLPERPRGDRDRLMSYWGYCFETLAT---EDPRRDDGEGIHDVDANVEYCAVIKTKLGAHRILMGAEMDCC 395          
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Match: UPI00125D723C (decapping nuclease DXO homolog, chloroplastic n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D723C)

HSP 1 Score: 55.1 bits (131), Expect = 8.380e-7
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    5 PW-LKVFKEGGVIYLEV-VMVDRNKGKMDRTS-YWGRRFETLCVLGVEGARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMG-EGDAC 89
            PW + V K  GV+YL+V  + +R K ++DR   YWG  FE+L     E     +  R  D      YCA+ +++IG H +LMG E D C
Sbjct:  301 PWEMGVHKRKGVVYLDVHKLPERPKSELDRRRCYWGYCFESLAT---EDPGRSDGDRIHDIDANVEYCAVIKTKIGAHRILMGAEMDCC 386          
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Match: A0A2U1M745_ARTAN (Decapping nuclease n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M745_ARTAN)

HSP 1 Score: 51.6 bits (122), Expect = 1.390e-5
Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    5 PW-LKVFKEGGVIYLEV-VMVDRNKGKMDRTS-YWGRRFETLCVLGVEGARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMG-EGDAC 89
            PW + V +  GV+YL+V  + +R K + DR   Y+G  FETL     E  R D+ +          YCAL ++++G H +LMG E D C
Sbjct:  275 PWEMGVHRRKGVVYLDVHKLPERPKSERDRRMCYYGYCFETLAT---EDPRRDDGEGIHHVDANVEYCALIKTKLGAHRILMGAEMDCC 360          
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Match: A0A6L2JX42_TANCI (Decapping nuclease n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JX42_TANCI)

HSP 1 Score: 51.6 bits (122), Expect = 1.390e-5
Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    5 PW-LKVFKEGGVIYLEV-VMVDRNKGKMDRTS-YWGRRFETLCVLGVEGARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMG-EGDAC 89
            PW + V +  GV+YL+V  + +R K + DR   Y+G  FETL     E  R D+ +          YCAL ++++G H +LMG E D C
Sbjct:  306 PWEMGVHRRKGVVYLDVHKLPERPKSERDRRMCYYGYCFETLAT---EDPRRDDGEGIHHVDANVEYCALIKTKLGAHRILMGAEMDCC 391          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67172.16251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JPT0_9PHAE1.550e-4485.54Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D8LT56_ECTSI4.250e-4383.33Decapping nuclease n=1 Tax=Ectocarpus siliculosus ... [more]
UPI001CB947C11.450e-840.45NAD-capped RNA hydrolase DXO1 n=1 Tax=Erigeron can... [more]
UPI00125D723C8.380e-738.20decapping nuclease DXO homolog, chloroplastic n=2 ... [more]
A0A2U1M745_ARTAN1.390e-537.08Decapping nuclease n=1 Tax=Artemisia annua TaxID=3... [more]
A0A6L2JX42_TANCI1.390e-537.08Decapping nuclease n=1 Tax=Tanacetum cinerariifoli... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67172contigM-pyrifera_M_contig67172:394..660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67172.16251.1mRNA_M-pyrifera_M_contig67172.16251.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67172 394..660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67172.16251.1 ID=prot_M-pyrifera_M_contig67172.16251.1|Name=mRNA_M-pyrifera_M_contig67172.16251.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
MHALPWLKVFKEGGVIYLEVVMVDRNKGKMDRTSYWGRRFETLCVLGVEG
ARLDELQRGPDDPPRPSYCALYRSRIGNHNVLMGEGDAC
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