mRNA_M-pyrifera_M_contig67100.16237.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A2E3MJ62_9GAMM (Uncharacterized protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MJ62_9GAMM) HSP 1 Score: 137 bits (345), Expect = 1.100e-31 Identity = 119/384 (30.99%), Postives = 198/384 (51.56%), Query Frame = 1
Query: 76 GWVMAGASFLALAQISDDQATAT----IGAPDATADISSAGSYVPDQAGFSAEMNMATTASSPSSMQM----ANPNDVNEFLHDQLGSIQQLFFDTLTAWTNMISGQGGGD----GGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAY----GLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKW--SIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVE-LDQMKQGSQEMGRGVTDTGSTGAS 1170
GW+ AG+ FL + Q D A + P+ I+ G ++A T+ PS Q+ +P+ VN L+ +F +AW + Q G + NP+ L G M+ + + F I+V AG A+ + S+ TG L++ + V+ V+F +A +Y+PL+PFI+FT+G +GW +LVIEAM AAP++ALG+LHPEG+H V+G+A+ G+ +++ VFLRPPLMIIGL AA ++ + V +++V FL + + SI+G+ ++ Y+++++ + + F LI+++PDR+MRWIGQ + + +Q QG ++ +G + S G S
Sbjct: 337 GWIFAGSYFLQITQSIDQSREAAYAFPVNGPNTGKLINIFGQDNDIITVYNAAEKFQTSNVDPSHTQIDIDITSPSGVNSILYS-------IFNPAFSAWKKYLKAQAKDMDNLLAGNFEF-NPIAELHALGTQMISGIEIAWLAFGGIVVGAGALAFIDSCMMPFSYMAQTG--------LMIFMPLVTMSAAVIFPSAGMLA----YYVPLMPFIIFTVGAVGWFILVIEAMAAAPILALGILHPEGQHEVYGKAEPGIYLLINVFLRPPLMIIGLFAAYLLMFAAVSLVNVAFLMLTGGFENKGAFDISIVGMSMLLGVYALVLLTVIQKCFGLIHMVPDRVMRWIGQHDQYAGAYGAEQDMQGFKQAAQGAGEQASKGTS 700
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A5E4PDR9_9COXI (Uncharacterized protein n=1 Tax=Aquicella siphonis TaxID=254247 RepID=A0A5E4PDR9_9COXI) HSP 1 Score: 135 bits (341), Expect = 3.810e-31 Identity = 119/383 (31.07%), Postives = 198/383 (51.70%), Query Frame = 1
Query: 13 VAAASSDTNQLNSLIDKMKGSGWVMAGASFLALAQISDDQATATIGAPDAT---ADISSAGSYVPD-QAGFSAEMNMATTASSPSSMQMANPND--VNEFLHDQLGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAAS---FAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQGSQEMG 1134
+AA ++++ + L+ GW+ G + +A+++ D ++I PD T D+SS S + D + F+A + + A+ S ++ E +D +GS+ + F T+TA GGT NP+I++ G+ ML + +FV ++VV A G++ + FA TGV ++ FV + F +L + G Y PLIP++ FT G +GW++ +E MVA PL+ALGV+ P G H + G+A+ LM++ VFLRP LMI GL++A+++ VVV +I+ F V + L+ ++ Y LI+ LN+ F++I ++P ++MRWIG GE L ++K G Q G
Sbjct: 379 IAAQGNNSSDFSGLLSNASNKGWIYGGGFYYEIARMNSDNLKSSI--PDLTWNAPDMSS--SAMKDYRNNFTAAKTLESVAAGNYSQSASSSGQSAAGEVANDVMGSVTEAFTATVTA------------GGT----NPLILIQVFGVLML---IIAEIMFVVVLVVL--FAIGISGNIDVFALGTGVIDPLGPMASLVAMFVIPGIYAAFAVLITLGGLLGIYTPLIPYVYFTFGAIGWMISTVETMVAGPLVALGVISPSGHHEILGKAEPALMLLFNVFLRPSLMIFGLISAMLLAVVVVTMINETFAYVVLAFVETGAVDPLSLILILSAYVGLILAALNKCFAVINVIPQQVMRWIGGQGEGVEAPLQEIKGGIQATG 736
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A849HRG6_9GAMM (DotA/TraY family protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A849HRG6_9GAMM) HSP 1 Score: 134 bits (336), Expect = 1.870e-30 Identity = 96/287 (33.45%), Postives = 155/287 (54.01%), Query Frame = 1
Query: 307 LGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAA-YGLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGIL-----TGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQGSQEMGRGVTD 1149
LG + F D L + ++G GG NPV+ L G M+ T + + A + +A AA YG F G+AAA + F + M G++ TG + G+Y+PL+PFI+FT G L W +LVIEAM+AAP++ALG++HPEG+H ++G + G+M++V +FLRP LM++G +A ++ Y+ I++ GFL + + S + + S+ I + +++ F +I+ +PD IMRWIG+ E + E DQ + G G+ +
Sbjct: 534 LGIVNNFFDDALNWFVQALTGVGG---------NPVVSLSVFGQLMVVSTATGFALITAALTLASIAAGYG----FIFTKGIAAA-------ITTFTTWFTMTATGLMILCMSTGAML--GYYMPLVPFILFTAGSLAWFILVIEAMIAAPIVALGIVHPEGQHDIWGRGEKGIMLIVSIFLRPALMVVGFIAGSILIYIAFQILNSGFLVAVAFIGTAGMGPFTFIFSFVAYTSLAIYL-MHQCFKMIHKIPDNIMRWIGEAAESTGQEADQEVSSGAQKGSGLAE 797
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A1G0ID41_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_28 TaxID=1798287 RepID=A0A1G0ID41_9GAMM) HSP 1 Score: 131 bits (330), Expect = 1.120e-29 Identity = 119/374 (31.82%), Postives = 197/374 (52.67%), Query Frame = 1
Query: 1 MTQAVAAASSDTNQLNSLIDKMKGSGWVMAGASFLALAQISDDQATATIGAPDATADISSAGSYVPDQAGFSAEMNMATTASSPSSMQMANPNDVNEFLHDQLGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLF-GILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVA-LGDKWSIIGLVSM----------MVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQ 1086
+T+ +A+ DT L + + +GWV+AGA + ++AQ++++ I A + A + +Q F N + A S Q A + V + + G + F + A+ + + GT NP++ + TG +L + ++ +F I + A G +A + G TG G+ L+L V P+M F +L G+ G Y+PLIP+++FT G LGW + IEAMVA PL+ALG+L P G+H + G+++ LM++ +FLRP LMI GL+ AL++ V +I+++ F V T +A LG + G ++ V Y LIV L+++F+LI+I+P+ +MRWIG GE+
Sbjct: 384 VTEFIASQGQDTQALQGRLRDAQRTGWVLAGAYYYSIAQMNNNNFKNAIPAL-----VLQAPRFPNNQLAF--YRNNISAAGDIISQQAAADSAVAS-MPELAGPMGAAFQNVSHAFVSATASGNAKTRGT----NPLVAVQATGYALLFVALILFRIFFNITI-ALGIVSNIAVTVLG-TGPTLNPVGAGLVLGYMVLVPMMYGFLALLIGMGGMLGVYVPLIPYVLFTFGALGWFISTIEAMVAGPLVALGILVPGGQHDILGKSEPALMLLFNIFLRPSLMIFGLIGALLLSSVAIIMLNAAFGVVITSIADLGGQGKAAGAAALAANPLQTLLFFVAYIFLIVTLLHKSFALIHIIPENVMRWIGGQGER 743
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A1G0GI72_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_14 TaxID=1798279 RepID=A0A1G0GI72_9GAMM) HSP 1 Score: 131 bits (329), Expect = 1.450e-29 Identity = 89/222 (40.09%), Postives = 127/222 (57.21%), Query Frame = 1
Query: 514 GLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGD--KWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVE--LDQMKQGSQEMGRGVTDTGSTGA 1167
G + FA TG G + L + +M+ G+L G Y+PLIP+ +FT GV+GW + IEAMVA PL+ALG+L P G+H V G+A+ LM++ VFLRP LM+ GL+AA+++ V+V ++ F A G+ K SI + Y LIV +N+AFSLIY++P++++RWIG GE E L +MK G+ E G G GA
Sbjct: 542 GYTSPFAIGTGAILPTSGGFISLYMVIGPALMLFLGLLITYGALLGVYVPLIPYTIFTFGVIGWFISTIEAMVAGPLVALGILSPSGQHEVLGKAEPALMLLFNVFLRPTLMVFGLIAAMILASVLVSFVNTTFWS-----ATGEWTKASITSFCIYLTIYVFLIVSVVNKAFSLIYVIPEKVVRWIGGQGEAHGEEHALGEMK-GASEKGAAGAKAGQKGA 757
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A177QPC7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SCGC AG-212-F23 TaxID=1799661 RepID=A0A177QPC7_9GAMM) HSP 1 Score: 130 bits (327), Expect = 2.740e-29 Identity = 90/241 (37.34%), Postives = 141/241 (58.51%), Query Frame = 1
Query: 406 NPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVF---YSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQG 1119
NP+I + G +L ++ I +VA G + + S G T A G L LV+ ++ + L I + + YIPL+P+++FT GVLGW + VIEAMVAAP+MA+G+L P G+H + G A+ +MI++ +FLRP LMI G++AA+++ V+V II+ F V + G K G++ +F Y+ +I+ +N+ FSLI+ILPDR++R++G G +QM QG
Sbjct: 529 NPIIQMQEFGHDLLGGAEAVFWTTFGINLVAAG--FSMPYSIFGTTWNPVVA-GVLSYLVSMFNSGMFFLMAIFISLGGLFAVYIPLLPYMLFTFGVLGWFIAVIEAMVAAPIMAIGILSPGGQHEILGRAEPAVMILLNIFLRPTLMIFGMIAAMLLSSVIVFIINQAFSHVIASILNGSKGQFSGIIEGFLFIFAYASIIITVVNKCFSLIHILPDRVLRYVG--GHPEGFGEEQMAQG 764
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A370GDB5_9COXI (Conjugal transfer/type IV secretion protein DotA/TraY n=1 Tax=Aquicella lusitana TaxID=254246 RepID=A0A370GDB5_9COXI) HSP 1 Score: 129 bits (325), Expect = 5.030e-29 Identity = 96/294 (32.65%), Postives = 163/294 (55.44%), Query Frame = 1
Query: 313 SIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWG------SLLMLVNFVSAPVMVLF-GILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQGSQEMGRGVTDTGSTGASG 1173
S+ D +T + M++G G G+ +SNP++ L N G W++ I + +A++++ + GY V A G + ++ + P+ LF G + Y+PLIP+++FT G GW + VIEAMVAAPL+ALG+L P G+H + G+A+ LM++ +FLRP LMI GL+AA ++ V V++++ GFL VA+ A+ + ++ + Y +I++ +N+++SLI+++PDR++RWIG E + +E E G G + G G +G
Sbjct: 500 SMSSFGSDIMTFFMQMLTGGGPGE----KVSNPLVTLQNLGF----WLLIIAQIVLALVIIVIPTL-----TLLGYLSVYALGTGFDNPIGPTVTTLSIIFTPIFSLFLGAFFMFGASLAIYVPLIPYVIFTFGAFGWFIAVIEAMVAAPLVALGLLIPGGQHELLGKAEHALMLIFNIFLRPSLMIFGLIAATLLAMVGVMMVNAGFLGVAS--AIYQNPGPVEVILFLAAYVSIILLIINKSYSLIHLIPDRVLRWIGGHAEGTGME---------EAGLGAAEKGVAGGAG 769
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: K2BI66_9BACT (Defect in organelle trafficking protein DotA n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2BI66_9BACT) HSP 1 Score: 127 bits (320), Expect = 2.230e-28 Identity = 76/171 (44.44%), Postives = 111/171 (64.91%), Query Frame = 1
Query: 583 VNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVF---YSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQ 1086
V V+ + V+ G L + G Y+PLIPF++FT+GV+GW + VIE MVAAP++ALG+L P G+H + G A+ LM+V +FLRP LMI GL+AA+++ VVV +I+ GFL V + GL ++F Y L+V LN+ FSLIY++P+R++ +IG P Q
Sbjct: 584 VGLVTPFIFVMIGSLYSLGALLGIYVPLIPFVIFTVGVIGWFIAVIEVMVAAPIVALGILSPGGQHDILGRAEPALMLVFNLFLRPVLMIFGLMAAMLLSVVVVNLINAGFLAVMEQIISHP-----GLFEQILFIAAYVSLLVTALNKTFSLIYMIPERVLTYIGGPAVQ 749
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: UPI00036EFB65 (DotA/TraY family protein n=1 Tax=Fangia hongkongensis TaxID=270495 RepID=UPI00036EFB65) HSP 1 Score: 126 bits (316), Expect = 8.050e-28 Identity = 80/208 (38.46%), Postives = 136/208 (65.38%), Query Frame = 1
Query: 559 AWGSLLMLVNFVSAPVMVLFGILT--GVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVAL---GDKWSIIGLVSMM--VFYSMLIVIGLNRAFSLIYILPDRIMRWIGQ-PGEQSNVE-LDQMKQGSQEMGRGVTDTG 1155
AW L ++ +F+ P+ + F ++T G+ + + IPL PFI+F G + W++LVIEA++AAP++ALG+++P+G H VFG+A+ G+ I++ V LRP LM++GL+A +V+ YV++ + GF + T ++ G + G S++ + Y+ I I N+ FSLIY+LPD++M+W+G GE+S VE L ++K S + G+ +G
Sbjct: 684 AW-MLSIMSSFIWLPI-IFFVLITLFGIGVLFALIIPLTPFILFWAGKIAWLLLVIEALIAAPIVALGIVYPQG-HEVFGKAETGIQIMLNVVLRPVLMVVGLLAGIVLTYVIISFSADGFHNIITQISAIFSGSSVYVNGTFSLLCVLLYASFISIAFNKCFSLIYLLPDKVMQWVGHNAGERSGVEDLQELKSSSSQNASGLAQSG 888
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A1G0HDP9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_20 TaxID=1798283 RepID=A0A1G0HDP9_9GAMM) HSP 1 Score: 125 bits (315), Expect = 1.030e-27 Identity = 80/170 (47.06%), Postives = 111/170 (65.29%), Query Frame = 1
Query: 571 LLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVF---YSMLIVIGLNRAFSLIYILPDRIMRWIG 1071
L ML+N + V L GIL G+ T Y+PLIP++VFT+GVLGW + IEAMVA PL+ALG+L P G+H + G+A+ LM++ +FLRP LM+ GL+AAL M V +I+ G V + + GL+ +++F Y LIV LN+ FSL++ILPDRI+ WIG
Sbjct: 612 LFMLLNPI---VFFLLGILFGIGSTLAIYVPLIPYVVFTVGVLGWFIQSIEAMVAGPLIALGILAPSGQHELLGKAEPALMMLFNLFLRPSLMVFGLMAALFMSVAAVTMINAGIGSVISSIMSP------GLLEILLFMGAYVSLIVTALNKCFSLVWILPDRILTWIG 772 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67100.16237.1 >prot_M-pyrifera_M_contig67100.16237.1 ID=prot_M-pyrifera_M_contig67100.16237.1|Name=mRNA_M-pyrifera_M_contig67100.16237.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=392bp MTQAVAAASSDTNQLNSLIDKMKGSGWVMAGASFLALAQISDDQATATIGback to top mRNA from alignment at M-pyrifera_M_contig67100:23..1198- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67100.16237.1 ID=mRNA_M-pyrifera_M_contig67100.16237.1|Name=mRNA_M-pyrifera_M_contig67100.16237.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig67100:23..1198- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67100:23..1198- >mRNA_M-pyrifera_M_contig67100.16237.1 ID=mRNA_M-pyrifera_M_contig67100.16237.1|Name=mRNA_M-pyrifera_M_contig67100.16237.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2352bp|location=Sequence derived from alignment at M-pyrifera_M_contig67100:23..1198- (Macrocystis pyrifera P11B4 male)back to top |