mRNA_M-pyrifera_M_contig67100.16237.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67100.16237.1
Unique NamemRNA_M-pyrifera_M_contig67100.16237.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A2E3MJ62_9GAMM (Uncharacterized protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MJ62_9GAMM)

HSP 1 Score: 137 bits (345), Expect = 1.100e-31
Identity = 119/384 (30.99%), Postives = 198/384 (51.56%), Query Frame = 1
Query:   76 GWVMAGASFLALAQISDDQATAT----IGAPDATADISSAGSYVPDQAGFSAEMNMATTASSPSSMQM----ANPNDVNEFLHDQLGSIQQLFFDTLTAWTNMISGQGGGD----GGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAY----GLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKW--SIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVE-LDQMKQGSQEMGRGVTDTGSTGAS 1170
            GW+ AG+ FL + Q  D    A     +  P+    I+  G        ++A     T+   PS  Q+     +P+ VN  L+        +F    +AW   +  Q         G +   NP+  L   G  M+  +   +  F  I+V AG  A+     +  S+   TG        L++ +  V+    V+F     +A    +Y+PL+PFI+FT+G +GW +LVIEAM AAP++ALG+LHPEG+H V+G+A+ G+ +++ VFLRPPLMIIGL AA ++ +  V +++V FL +         +  SI+G+  ++  Y+++++  + + F LI+++PDR+MRWIGQ  + +     +Q  QG ++  +G  +  S G S
Sbjct:  337 GWIFAGSYFLQITQSIDQSREAAYAFPVNGPNTGKLINIFGQDNDIITVYNAAEKFQTSNVDPSHTQIDIDITSPSGVNSILYS-------IFNPAFSAWKKYLKAQAKDMDNLLAGNFEF-NPIAELHALGTQMISGIEIAWLAFGGIVVGAGALAFIDSCMMPFSYMAQTG--------LMIFMPLVTMSAAVIFPSAGMLA----YYVPLMPFIIFTVGAVGWFILVIEAMAAAPILALGILHPEGQHEVYGKAEPGIYLLINVFLRPPLMIIGLFAAYLLMFAAVSLVNVAFLMLTGGFENKGAFDISIVGMSMLLGVYALVLLTVIQKCFGLIHMVPDRVMRWIGQHDQYAGAYGAEQDMQGFKQAAQGAGEQASKGTS 700          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A5E4PDR9_9COXI (Uncharacterized protein n=1 Tax=Aquicella siphonis TaxID=254247 RepID=A0A5E4PDR9_9COXI)

HSP 1 Score: 135 bits (341), Expect = 3.810e-31
Identity = 119/383 (31.07%), Postives = 198/383 (51.70%), Query Frame = 1
Query:   13 VAAASSDTNQLNSLIDKMKGSGWVMAGASFLALAQISDDQATATIGAPDAT---ADISSAGSYVPD-QAGFSAEMNMATTASSPSSMQMANPND--VNEFLHDQLGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAAS---FAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQGSQEMG 1134
            +AA  ++++  + L+      GW+  G  +  +A+++ D   ++I  PD T    D+SS  S + D +  F+A   + + A+   S   ++       E  +D +GS+ + F  T+TA            GGT    NP+I++   G+ ML   +    +FV ++VV    A G++ +   FA  TGV         ++  FV   +   F +L  +    G Y PLIP++ FT G +GW++  +E MVA PL+ALGV+ P G H + G+A+  LM++  VFLRP LMI GL++A+++  VVV +I+  F  V            + L+ ++  Y  LI+  LN+ F++I ++P ++MRWIG  GE     L ++K G Q  G
Sbjct:  379 IAAQGNNSSDFSGLLSNASNKGWIYGGGFYYEIARMNSDNLKSSI--PDLTWNAPDMSS--SAMKDYRNNFTAAKTLESVAAGNYSQSASSSGQSAAGEVANDVMGSVTEAFTATVTA------------GGT----NPLILIQVFGVLML---IIAEIMFVVVLVVL--FAIGISGNIDVFALGTGVIDPLGPMASLVAMFVIPGIYAAFAVLITLGGLLGIYTPLIPYVYFTFGAIGWMISTVETMVAGPLVALGVISPSGHHEILGKAEPALMLLFNVFLRPSLMIFGLISAMLLAVVVVTMINETFAYVVLAFVETGAVDPLSLILILSAYVGLILAALNKCFAVINVIPQQVMRWIGGQGEGVEAPLQEIKGGIQATG 736          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A849HRG6_9GAMM (DotA/TraY family protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A849HRG6_9GAMM)

HSP 1 Score: 134 bits (336), Expect = 1.870e-30
Identity = 96/287 (33.45%), Postives = 155/287 (54.01%), Query Frame = 1
Query:  307 LGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAA-YGLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGIL-----TGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQGSQEMGRGVTD 1149
            LG +   F D L  +   ++G GG         NPV+ L   G  M+    T + +  A + +A  AA YG    F    G+AAA       +  F +   M   G++     TG  +  G+Y+PL+PFI+FT G L W +LVIEAM+AAP++ALG++HPEG+H ++G  + G+M++V +FLRP LM++G +A  ++ Y+   I++ GFL     +          + S + + S+ I + +++ F +I+ +PD IMRWIG+  E +  E DQ      + G G+ +
Sbjct:  534 LGIVNNFFDDALNWFVQALTGVGG---------NPVVSLSVFGQLMVVSTATGFALITAALTLASIAAGYG----FIFTKGIAAA-------ITTFTTWFTMTATGLMILCMSTGAML--GYYMPLVPFILFTAGSLAWFILVIEAMIAAPIVALGIVHPEGQHDIWGRGEKGIMLIVSIFLRPALMVVGFIAGSILIYIAFQILNSGFLVAVAFIGTAGMGPFTFIFSFVAYTSLAIYL-MHQCFKMIHKIPDNIMRWIGEAAESTGQEADQEVSSGAQKGSGLAE 797          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A1G0ID41_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_28 TaxID=1798287 RepID=A0A1G0ID41_9GAMM)

HSP 1 Score: 131 bits (330), Expect = 1.120e-29
Identity = 119/374 (31.82%), Postives = 197/374 (52.67%), Query Frame = 1
Query:    1 MTQAVAAASSDTNQLNSLIDKMKGSGWVMAGASFLALAQISDDQATATIGAPDATADISSAGSYVPDQAGFSAEMNMATTASSPSSMQMANPNDVNEFLHDQLGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLF-GILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVA-LGDKWSIIGLVSM----------MVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQ 1086
            +T+ +A+   DT  L   +   + +GWV+AGA + ++AQ++++     I A      +  A  +  +Q  F    N  + A    S Q A  + V   + +  G +   F +   A+ +  +       GT    NP++ +  TG  +L   + ++ +F  I + A G    +A +  G TG      G+ L+L   V  P+M  F  +L G+    G Y+PLIP+++FT G LGW +  IEAMVA PL+ALG+L P G+H + G+++  LM++  +FLRP LMI GL+ AL++  V +I+++  F  V T +A LG +    G  ++           V Y  LIV  L+++F+LI+I+P+ +MRWIG  GE+
Sbjct:  384 VTEFIASQGQDTQALQGRLRDAQRTGWVLAGAYYYSIAQMNNNNFKNAIPAL-----VLQAPRFPNNQLAF--YRNNISAAGDIISQQAAADSAVAS-MPELAGPMGAAFQNVSHAFVSATASGNAKTRGT----NPLVAVQATGYALLFVALILFRIFFNITI-ALGIVSNIAVTVLG-TGPTLNPVGAGLVLGYMVLVPMMYGFLALLIGMGGMLGVYVPLIPYVLFTFGALGWFISTIEAMVAGPLVALGILVPGGQHDILGKSEPALMLLFNIFLRPSLMIFGLIGALLLSSVAIIMLNAAFGVVITSIADLGGQGKAAGAAALAANPLQTLLFFVAYIFLIVTLLHKSFALIHIIPENVMRWIGGQGER 743          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A1G0GI72_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_14 TaxID=1798279 RepID=A0A1G0GI72_9GAMM)

HSP 1 Score: 131 bits (329), Expect = 1.450e-29
Identity = 89/222 (40.09%), Postives = 127/222 (57.21%), Query Frame = 1
Query:  514 GLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGD--KWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVE--LDQMKQGSQEMGRGVTDTGSTGA 1167
            G  + FA  TG      G  + L   +   +M+  G+L       G Y+PLIP+ +FT GV+GW +  IEAMVA PL+ALG+L P G+H V G+A+  LM++  VFLRP LM+ GL+AA+++  V+V  ++  F       A G+  K SI      +  Y  LIV  +N+AFSLIY++P++++RWIG  GE    E  L +MK G+ E G      G  GA
Sbjct:  542 GYTSPFAIGTGAILPTSGGFISLYMVIGPALMLFLGLLITYGALLGVYVPLIPYTIFTFGVIGWFISTIEAMVAGPLVALGILSPSGQHEVLGKAEPALMLLFNVFLRPTLMVFGLIAAMILASVLVSFVNTTFWS-----ATGEWTKASITSFCIYLTIYVFLIVSVVNKAFSLIYVIPEKVVRWIGGQGEAHGEEHALGEMK-GASEKGAAGAKAGQKGA 757          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A177QPC7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SCGC AG-212-F23 TaxID=1799661 RepID=A0A177QPC7_9GAMM)

HSP 1 Score: 130 bits (327), Expect = 2.740e-29
Identity = 90/241 (37.34%), Postives = 141/241 (58.51%), Query Frame = 1
Query:  406 NPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWGSLLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVF---YSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQG 1119
            NP+I +   G  +L     ++     I +VA G  + +  S  G T     A G L  LV+  ++ +  L  I   +   +  YIPL+P+++FT GVLGW + VIEAMVAAP+MA+G+L P G+H + G A+  +MI++ +FLRP LMI G++AA+++  V+V II+  F  V   +  G K    G++   +F   Y+ +I+  +N+ FSLI+ILPDR++R++G  G       +QM QG
Sbjct:  529 NPIIQMQEFGHDLLGGAEAVFWTTFGINLVAAG--FSMPYSIFGTTWNPVVA-GVLSYLVSMFNSGMFFLMAIFISLGGLFAVYIPLLPYMLFTFGVLGWFIAVIEAMVAAPIMAIGILSPGGQHEILGRAEPAVMILLNIFLRPTLMIFGMIAAMLLSSVIVFIINQAFSHVIASILNGSKGQFSGIIEGFLFIFAYASIIITVVNKCFSLIHILPDRVLRYVG--GHPEGFGEEQMAQG 764          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A370GDB5_9COXI (Conjugal transfer/type IV secretion protein DotA/TraY n=1 Tax=Aquicella lusitana TaxID=254246 RepID=A0A370GDB5_9COXI)

HSP 1 Score: 129 bits (325), Expect = 5.030e-29
Identity = 96/294 (32.65%), Postives = 163/294 (55.44%), Query Frame = 1
Query:  313 SIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLRWVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWG------SLLMLVNFVSAPVMVLF-GILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQSNVELDQMKQGSQEMGRGVTDTGSTGASG 1173
            S+     D +T +  M++G G G+     +SNP++ L N G     W++ I  + +A++++          +  GY  V A   G        +  ++ +  P+  LF G       +   Y+PLIP+++FT G  GW + VIEAMVAAPL+ALG+L P G+H + G+A+  LM++  +FLRP LMI GL+AA ++  V V++++ GFL VA+  A+      + ++  +  Y  +I++ +N+++SLI+++PDR++RWIG   E + +E         E G G  + G  G +G
Sbjct:  500 SMSSFGSDIMTFFMQMLTGGGPGE----KVSNPLVTLQNLGF----WLLIIAQIVLALVIIVIPTL-----TLLGYLSVYALGTGFDNPIGPTVTTLSIIFTPIFSLFLGAFFMFGASLAIYVPLIPYVIFTFGAFGWFIAVIEAMVAAPLVALGLLIPGGQHELLGKAEHALMLIFNIFLRPSLMIFGLIAATLLAMVGVMMVNAGFLGVAS--AIYQNPGPVEVILFLAAYVSIILLIINKSYSLIHLIPDRVLRWIGGHAEGTGME---------EAGLGAAEKGVAGGAG 769          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: K2BI66_9BACT (Defect in organelle trafficking protein DotA n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2BI66_9BACT)

HSP 1 Score: 127 bits (320), Expect = 2.230e-28
Identity = 76/171 (44.44%), Postives = 111/171 (64.91%), Query Frame = 1
Query:  583 VNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVF---YSMLIVIGLNRAFSLIYILPDRIMRWIGQPGEQ 1086
            V  V+  + V+ G L  +    G Y+PLIPF++FT+GV+GW + VIE MVAAP++ALG+L P G+H + G A+  LM+V  +FLRP LMI GL+AA+++  VVV +I+ GFL V   +         GL   ++F   Y  L+V  LN+ FSLIY++P+R++ +IG P  Q
Sbjct:  584 VGLVTPFIFVMIGSLYSLGALLGIYVPLIPFVIFTVGVIGWFIAVIEVMVAAPIVALGILSPGGQHDILGRAEPALMLVFNLFLRPVLMIFGLMAAMLLSVVVVNLINAGFLAVMEQIISHP-----GLFEQILFIAAYVSLLVTALNKTFSLIYMIPERVLTYIGGPAVQ 749          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: UPI00036EFB65 (DotA/TraY family protein n=1 Tax=Fangia hongkongensis TaxID=270495 RepID=UPI00036EFB65)

HSP 1 Score: 126 bits (316), Expect = 8.050e-28
Identity = 80/208 (38.46%), Postives = 136/208 (65.38%), Query Frame = 1
Query:  559 AWGSLLMLVNFVSAPVMVLFGILT--GVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVAL---GDKWSIIGLVSMM--VFYSMLIVIGLNRAFSLIYILPDRIMRWIGQ-PGEQSNVE-LDQMKQGSQEMGRGVTDTG 1155
            AW  L ++ +F+  P+ + F ++T  G+ + +   IPL PFI+F  G + W++LVIEA++AAP++ALG+++P+G H VFG+A+ G+ I++ V LRP LM++GL+A +V+ YV++   + GF  + T ++    G    + G  S++  + Y+  I I  N+ FSLIY+LPD++M+W+G   GE+S VE L ++K  S +   G+  +G
Sbjct:  684 AW-MLSIMSSFIWLPI-IFFVLITLFGIGVLFALIIPLTPFILFWAGKIAWLLLVIEALIAAPIVALGIVYPQG-HEVFGKAETGIQIMLNVVLRPVLMVVGLLAGIVLTYVIISFSADGFHNIITQISAIFSGSSVYVNGTFSLLCVLLYASFISIAFNKCFSLIYLLPDKVMQWVGHNAGERSGVEDLQELKSSSSQNASGLAQSG 888          
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Match: A0A1G0HDP9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_20 TaxID=1798283 RepID=A0A1G0HDP9_9GAMM)

HSP 1 Score: 125 bits (315), Expect = 1.030e-27
Identity = 80/170 (47.06%), Postives = 111/170 (65.29%), Query Frame = 1
Query:  571 LLMLVNFVSAPVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMALGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVIIISVGFLPVATMVALGDKWSIIGLVSMMVF---YSMLIVIGLNRAFSLIYILPDRIMRWIG 1071
            L ML+N +   V  L GIL G+  T   Y+PLIP++VFT+GVLGW +  IEAMVA PL+ALG+L P G+H + G+A+  LM++  +FLRP LM+ GL+AAL M    V +I+ G   V + +         GL+ +++F   Y  LIV  LN+ FSL++ILPDRI+ WIG
Sbjct:  612 LFMLLNPI---VFFLLGILFGIGSTLAIYVPLIPYVVFTVGVLGWFIQSIEAMVAGPLIALGILAPSGQHELLGKAEPALMMLFNLFLRPSLMVFGLMAALFMSVAAVTMINAGIGSVISSIMSP------GLLEILLFMGAYVSLIVTALNKCFSLVWILPDRILTWIG 772          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67100.16237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MJ62_9GAMM1.100e-3130.99Uncharacterized protein n=1 Tax=Legionellales bact... [more]
A0A5E4PDR9_9COXI3.810e-3131.07Uncharacterized protein n=1 Tax=Aquicella siphonis... [more]
A0A849HRG6_9GAMM1.870e-3033.45DotA/TraY family protein n=1 Tax=Legionellales bac... [more]
A0A1G0ID41_9GAMM1.120e-2931.82Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A1G0GI72_9GAMM1.450e-2940.09Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A177QPC7_9GAMM2.740e-2937.34Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A370GDB5_9COXI5.030e-2932.65Conjugal transfer/type IV secretion protein DotA/T... [more]
K2BI66_9BACT2.230e-2844.44Defect in organelle trafficking protein DotA n=1 T... [more]
UPI00036EFB658.050e-2838.46DotA/TraY family protein n=1 Tax=Fangia hongkongen... [more]
A0A1G0HDP9_9GAMM1.030e-2747.06Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67100contigM-pyrifera_M_contig67100:23..1198 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score128.6
Seed ortholog evalue6.2e-27
Seed eggNOG ortholog1089439.KB902253_gene1418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.spore germination
EggNOG OGs1RE9G@1224,1S8GF@1236,COG0697@1,COG0697@2
COG Functional cat.EG
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size1176
Cds size1176
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816561.339896-CDS-M-pyrifera_M_contig67100:22..11981622816561.339896-CDS-M-pyrifera_M_contig67100:22..1198Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67100 23..1198 -
1692278047.5794964-CDS-M-pyrifera_M_contig67100:22..11981692278047.5794964-CDS-M-pyrifera_M_contig67100:22..1198Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67100 23..1198 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67100.16237.1prot_M-pyrifera_M_contig67100.16237.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67100 23..1198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67100.16237.1

>prot_M-pyrifera_M_contig67100.16237.1 ID=prot_M-pyrifera_M_contig67100.16237.1|Name=mRNA_M-pyrifera_M_contig67100.16237.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=392bp
MTQAVAAASSDTNQLNSLIDKMKGSGWVMAGASFLALAQISDDQATATIG
APDATADISSAGSYVPDQAGFSAEMNMATTASSPSSMQMANPNDVNEFLH
DQLGSIQQLFFDTLTAWTNMISGQGGGDGGTYTMSNPVIVLMNTGITMLR
WVVTIYGVFVAIMVVAGGAAYGLAASFAGYTGVAAAAWGSLLMLVNFVSA
PVMVLFGILTGVAITWGFYIPLIPFIVFTMGVLGWIMLVIEAMVAAPLMA
LGVLHPEGKHTVFGEAQAGLMIVVGVFLRPPLMIIGLVAALVMCYVVVII
ISVGFLPVATMVALGDKWSIIGLVSMMVFYSMLIVIGLNRAFSLIYILPD
RIMRWIGQPGEQSNVELDQMKQGSQEMGRGVTDTGSTGASGA
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mRNA from alignment at M-pyrifera_M_contig67100:23..1198-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67100.16237.1 ID=mRNA_M-pyrifera_M_contig67100.16237.1|Name=mRNA_M-pyrifera_M_contig67100.16237.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig67100:23..1198- (Macrocystis pyrifera P11B4 male)
ATGACCCAAGCCGTTGCTGCAGCAAGTAGTGATACTAATCAATTAAACAG TTTGATTGATAAAATGAAAGGATCGGGCTGGGTAATGGCAGGCGCAAGCT TTTTAGCATTAGCACAGATTTCAGATGATCAGGCAACGGCGACAATTGGC GCTCCCGATGCGACAGCTGATATTTCTAGCGCGGGTAGCTATGTTCCGGA TCAAGCAGGATTTAGTGCAGAAATGAATATGGCGACCACTGCATCGTCTC CTAGCAGTATGCAGATGGCGAACCCTAATGATGTGAATGAATTTTTGCAT GATCAGTTAGGCAGTATTCAACAGTTATTTTTTGATACCTTAACCGCATG GACGAATATGATTTCAGGTCAAGGTGGCGGTGATGGTGGAACATATACCA TGAGTAATCCTGTCATTGTGTTGATGAACACAGGTATTACCATGCTGCGC TGGGTTGTGACGATTTATGGCGTATTTGTAGCTATCATGGTTGTAGCCGG TGGAGCAGCTTATGGGCTTGCAGCGAGTTTTGCGGGGTATACAGGTGTTG CAGCTGCCGCATGGGGTAGTCTCCTCATGCTTGTGAACTTTGTCAGTGCG CCTGTTATGGTGCTATTTGGGATATTAACAGGTGTTGCGATTACGTGGGG TTTTTATATTCCACTGATTCCGTTTATTGTGTTTACTATGGGTGTTTTAG GCTGGATTATGTTGGTTATTGAGGCCATGGTTGCCGCACCGCTTATGGCA CTCGGTGTCTTACATCCTGAAGGCAAGCATACGGTTTTTGGTGAAGCACA AGCCGGTCTTATGATTGTTGTCGGGGTATTCCTGCGGCCGCCTTTAATGA TTATTGGTTTGGTTGCAGCCTTGGTTATGTGTTATGTTGTTGTGATTATT ATTAGTGTTGGCTTTTTGCCCGTCGCTACAATGGTCGCGCTAGGTGATAA ATGGAGTATTATTGGTTTAGTGTCGATGATGGTATTCTATTCAATGCTGA TTGTAATTGGGCTAAATAGAGCATTTTCACTTATTTATATCTTACCGGAT CGAATCATGCGTTGGATTGGTCAACCAGGCGAACAATCGAATGTTGAATT GGATCAAATGAAACAAGGATCACAAGAAATGGGTCGTGGTGTGACTGATA CCGGTAGTACAGGTGCAAGTGGTGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig67100:23..1198-

>mRNA_M-pyrifera_M_contig67100.16237.1 ID=mRNA_M-pyrifera_M_contig67100.16237.1|Name=mRNA_M-pyrifera_M_contig67100.16237.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2352bp|location=Sequence derived from alignment at M-pyrifera_M_contig67100:23..1198- (Macrocystis pyrifera P11B4 male)
ATGACCCAAGCCGTTGCTGCAGCAAGTAGTGATACTAATCAATTAAACAG
TTTGATTGATAAAATGAAAGGATCGGGCTGGGTAATGGCAGGCGCAAGCT
TTTTAGCATTAGCACAGATTTCAGATGATCAGGCAACGGCGACAATTGGC
GCTCCCGATGCGACAGCTGATATTTCTAGCGCGGGTAGCTATGTTCCGGA
TCAAGCAGGATTTAGTGCAGAAATGAATATGGCGACCACTGCATCGTCTC
CTAGCAGTATGCAGATGGCGAACCCTAATGATGTGAATGAATTTTTGCAT
GATCAGTTAGGCAGTATTCAACAGTTATTTTTTGATACCTTAACCGCATG
GACGAATATGATTTCAGGTCAAGGTGGCGGTGATGGTGGAACATATACCA
TGAGTAATCCTGTCATTGTGTTGATGAACACAGGTATTACCATGCTGCGC
TGGGTTGTGACGATTTATGGCGTATTTGTAGCTATCATGGTTGTAGCCGG
TGGAGCAGCTTATGGGCTTGCAGCGAGTTTTGCGGGGTATACAGGTGTTG
CAGCTGCCGCATGGGGTAGTCTCCTCATGCTTGTGAACTTTGTCAGTGCG
CCTGTTATGGTGCTATTTGGGATATTAACAGGTGTTGCGATTACGTGGGG
TTTTTATATTCCACTGATTCCGTTTATTGTGTTTACTATGGGTGTTTTAG
GCTGGATTATGTTGGTTATTGAGGCCATGGTTGCCGCACCGCTTATGGCA
CTCGGTGTCTTACATCCTGAAGGCAAGCATACGGTTTTTGGTGAAGCACA
AGCCGGTCTTATGATTGTTGTCGGGGTATTCCTGCGGCCGCCTTTAATGA
TTATTGGTTTGGTTGCAGCCTTGGTTATGTGTTATGTTGTTGTGATTATT
ATTAGTGTTGGCTTTTTGCCCGTCGCTACAATGGTCGCGCTAGGTGATAA
ATGGAGTATTATTGGTTTAGTGTCGATGATGGTATTCTATTCAATGCTGA
TTGTAATTGGGCTAAATAGAGCATTTTCACTTATTTATATCTTACCGGAT
CGAATCATGCGTTGGATTGGTCAACCAGGCGAACAATCGAATGTTGAATT
GGATCAAATGAAACAAGGATCACAAGAAATGGGTCGTGGTGTGACTGATA
CCGGTAGTACAGGTGCAAGTGGTGCGATGACCCAAGCCGTTGCTGCAGCA
AGTAGTGATACTAATCAATTAAACAGTTTGATTGATAAAATGAAAGGATC
GGGCTGGGTAATGGCAGGCGCAAGCTTTTTAGCATTAGCACAGATTTCAG
ATGATCAGGCAACGGCGACAATTGGCGCTCCCGATGCGACAGCTGATATT
TCTAGCGCGGGTAGCTATGTTCCGGATCAAGCAGGATTTAGTGCAGAAAT
GAATATGGCGACCACTGCATCGTCTCCTAGCAGTATGCAGATGGCGAACC
CTAATGATGTGAATGAATTTTTGCATGATCAGTTAGGCAGTATTCAACAG
TTATTTTTTGATACCTTAACCGCATGGACGAATATGATTTCAGGTCAAGG
TGGCGGTGATGGTGGAACATATACCATGAGTAATCCTGTCATTGTGTTGA
TGAACACAGGTATTACCATGCTGCGCTGGGTTGTGACGATTTATGGCGTA
TTTGTAGCTATCATGGTTGTAGCCGGTGGAGCAGCTTATGGGCTTGCAGC
GAGTTTTGCGGGGTATACAGGTGTTGCAGCTGCCGCATGGGGTAGTCTCC
TCATGCTTGTGAACTTTGTCAGTGCGCCTGTTATGGTGCTATTTGGGATA
TTAACAGGTGTTGCGATTACGTGGGGTTTTTATATTCCACTGATTCCGTT
TATTGTGTTTACTATGGGTGTTTTAGGCTGGATTATGTTGGTTATTGAGG
CCATGGTTGCCGCACCGCTTATGGCACTCGGTGTCTTACATCCTGAAGGC
AAGCATACGGTTTTTGGTGAAGCACAAGCCGGTCTTATGATTGTTGTCGG
GGTATTCCTGCGGCCGCCTTTAATGATTATTGGTTTGGTTGCAGCCTTGG
TTATGTGTTATGTTGTTGTGATTATTATTAGTGTTGGCTTTTTGCCCGTC
GCTACAATGGTCGCGCTAGGTGATAAATGGAGTATTATTGGTTTAGTGTC
GATGATGGTATTCTATTCAATGCTGATTGTAATTGGGCTAAATAGAGCAT
TTTCACTTATTTATATCTTACCGGATCGAATCATGCGTTGGATTGGTCAA
CCAGGCGAACAATCGAATGTTGAATTGGATCAAATGAAACAAGGATCACA
AGAAATGGGTCGTGGTGTGACTGATACCGGTAGTACAGGTGCAAGTGGTG
CG
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