prot_M-pyrifera_M_contig65907.16005.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65907.16005.1
Unique Nameprot_M-pyrifera_M_contig65907.16005.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length85
Homology
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: T0PRP4_SAPDV (U-box domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PRP4_SAPDV)

HSP 1 Score: 59.7 bits (143), Expect = 1.740e-8
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    9 CPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            CPITH+V  DPV+T  GHSYERSA+EE +R+  E    G        P T  PLR    ++ N AL+
Sbjct:   10 CPITHDVMVDPVVTADGHSYERSAIEEWIRSSRETAPGGQ----VTSPVTNLPLR-STQLIPNLALK 71          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A067CZ91_SAPPC (U-box domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CZ91_SAPPC)

HSP 1 Score: 58.5 bits (140), Expect = 4.380e-8
Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 0
Query:    9 CPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            CPITH+V  DPV+T  GHSYERSA+ E +RT  E    G        P T  PLR    ++ N AL+
Sbjct:   10 CPITHDVMADPVVTMDGHSYERSAIAEWIRTSRETAPGGQ----VTSPATNLPLR-SLQLIPNLALK 71          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A0D2K5U0_9CHLO (RING-type E3 ubiquitin transferase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2K5U0_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 5.380e-8
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    1 GGVPLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            G VP A  CP+T EVF+DPV+++ GH+YER+AL E       + K G W     DP TR P+    D+  N ++R
Sbjct:  250 GEVPSAFTCPLTMEVFRDPVVSKSGHTYERAALTE------HIAKVGGW-----DPITRIPMTL-ADVRPNISMR 312          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A2V0NKH4_9CHLO (RING-type E3 ubiquitin transferase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NKH4_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 7.170e-8
Identity = 35/75 (46.67%), Postives = 41/75 (54.67%), Query Frame = 0
Query:    1 GGVPLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            G VP    CP+T EVF+DPV+TR G SYER AL E L            K GA DP TR+ +    D+  N ALR
Sbjct:  237 GEVPSCLVCPLTMEVFRDPVVTRCGRSYERQALLEHLA-----------KVGAWDPITRKKVD-AADVTPNVALR 299          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A067CS94_SAPPC (U-box domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CS94_SAPPC)

HSP 1 Score: 57.4 bits (137), Expect = 1.120e-7
Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 0
Query:    9 CPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            CPITH+V  DPV+T  GHSYERSA+EE +RT  E    G        P T  PL     ++ N AL+
Sbjct:   10 CPITHDVMVDPVVTVDGHSYERSAIEEWIRTSHETAPGGQ----VTSPATNLPLG-STQLIPNLALK 71          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: D8SKS5_SELML (RING-type E3 ubiquitin transferase n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SKS5_SELML)

HSP 1 Score: 54.3 bits (129), Expect = 1.130e-6
Identity = 37/85 (43.53%), Postives = 44/85 (51.76%), Query Frame = 0
Query:    3 VPLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALRDVCVAM----GW 83
            +P    C IT +VF+DPVIT  G SYER+ L E LR           K G  DP TR PL  P  IV+N AL++   A     GW
Sbjct:  203 IPEHLCCKITMDVFRDPVITPSGVSYERAVLLEHLR-----------KVGKFDPWTRAPLE-PEQIVSNLALKEAVQAYMLDHGW 275          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A067CNN4_SAPPC (U-box domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CNN4_SAPPC)

HSP 1 Score: 54.3 bits (129), Expect = 1.360e-6
Identity = 30/67 (44.78%), Postives = 37/67 (55.22%), Query Frame = 0
Query:    9 CPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            CPIT +V  DPV+T  GHSYERSA+ E +RT  E    G        P T  PLR    ++ N AL+
Sbjct:   10 CPITQDVMVDPVVTVDGHSYERSAIAEWIRTSRETAPGGQ----VTSPATNLPLR-SLQLIPNLALK 71          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A383VZW3_TETOB (RING-type E3 ubiquitin transferase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VZW3_TETOB)

HSP 1 Score: 53.9 bits (128), Expect = 1.580e-6
Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 0
Query:    3 VPLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALRD 76
            VP A  CP+T EVF++PVIT  G SYERSAL E L            K G  DP +R+P+    DI  N  LR+
Sbjct:  207 VPTAFTCPLTMEVFREPVITPSGCSYERSALLEHLA-----------KVGKFDPISRQPMS-EADITLNVGLRN 268          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: B7G1K5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1K5_PHATC)

HSP 1 Score: 52.8 bits (125), Expect = 1.730e-6
Identity = 28/73 (38.36%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    3 VPLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            VP    CP+T  + +DPVI++YGHS+ER ++ E L   +++            P TR+PLR   D++TN  LR
Sbjct:   21 VPEDFICPLTLSLMQDPVISKYGHSFERESILEYLGRGSDIC-----------PCTRQPLRMR-DVITNHKLR 81          
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Match: A0A835XXB9_9CHLO (RING-type E3 ubiquitin transferase n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XXB9_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 4.000e-6
Identity = 30/72 (41.67%), Postives = 40/72 (55.56%), Query Frame = 0
Query:    4 PLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWKQGARDPTTRRPLRWPGDIVTNRALR 75
            P    CP+T E+F+DPV+T  G SYER+AL E L+           K G  DP TR+P+     +V N +LR
Sbjct:  200 PSTFTCPLTMEIFRDPVVTPSGRSYERTALLEHLK-----------KVGRFDPITRQPMT-EAQVVPNVSLR 259          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65907.16005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
T0PRP4_SAPDV1.740e-846.27U-box domain-containing protein n=1 Tax=Saprolegni... [more]
A0A067CZ91_SAPPC4.380e-846.27U-box domain-containing protein n=1 Tax=Saprolegni... [more]
A0A0D2K5U0_9CHLO5.380e-842.67RING-type E3 ubiquitin transferase n=1 Tax=Monorap... [more]
A0A2V0NKH4_9CHLO7.170e-846.67RING-type E3 ubiquitin transferase n=1 Tax=Raphido... [more]
A0A067CS94_SAPPC1.120e-746.27U-box domain-containing protein n=1 Tax=Saprolegni... [more]
D8SKS5_SELML1.130e-643.53RING-type E3 ubiquitin transferase n=6 Tax=Selagin... [more]
A0A067CNN4_SAPPC1.360e-644.78U-box domain-containing protein n=1 Tax=Saprolegni... [more]
A0A383VZW3_TETOB1.580e-645.95RING-type E3 ubiquitin transferase n=2 Tax=Scenede... [more]
B7G1K5_PHATC1.730e-638.36Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A835XXB9_9CHLO4.000e-641.67RING-type E3 ubiquitin transferase n=2 Tax=Edaphoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 6..81
e-value: 6.5E-4
score: 25.7
IPR003613U box domainPFAMPF04564U-boxcoord: 8..75
e-value: 2.1E-8
score: 34.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..81
e-value: 3.7E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR46573FAMILY NOT NAMEDcoord: 9..75
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 4..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65907contigM-pyrifera_M_contig65907:746..1000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65907.16005.1mRNA_M-pyrifera_M_contig65907.16005.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65907 746..1000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65907.16005.1 ID=prot_M-pyrifera_M_contig65907.16005.1|Name=mRNA_M-pyrifera_M_contig65907.16005.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
GGVPLAAHCPITHEVFKDPVITRYGHSYERSALEEALRTDAEVTKSGDWK
QGARDPTTRRPLRWPGDIVTNRALRDVCVAMGWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD