prot_M-pyrifera_M_contig100671.155.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100671.155.1
Unique Nameprot_M-pyrifera_M_contig100671.155.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length144
Homology
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A7X8ULJ6_9BACT (Peptide chain release factor 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8ULJ6_9BACT)

HSP 1 Score: 172 bits (435), Expect = 2.720e-48
Identity = 84/143 (58.74%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLPFQD 143
            DEIP FAPECF +IEN  P   KRFR GL+QLLQEGV+Q Y L DA R VPLLGA GPLQFEIVQ+RL+SEYGA++RL+ A WT  RW+ PS       +P   RLA DG  RPVLLF   W + YF  +N  + ++ LPF D
Sbjct:  392 DEIPRFAPECFAFIENPTPANYKRFREGLDQLLQEGVVQCYDLADASRRVPLLGAVGPLQFEIVQYRLQSEYGAQSRLEPAQWTVARWLDPSANADSLVMPTSARLALDGQRRPVLLFPDEWNLRYFENRNPGVGISDLPFPD 534          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A7C1EAR3_9BACT (Peptide chain release factor 3 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C1EAR3_9BACT)

HSP 1 Score: 165 bits (417), Expect = 1.180e-45
Identity = 78/142 (54.93%), Postives = 99/142 (69.72%), Query Frame = 0
Query:    2 EIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLPFQD 143
            EIP FAPECF Y+EN     SKRF +GL QLLQEGV+Q Y LP A+R VPLLGA GPLQF+IVQ+RLESEYG  +R+  APW+ +RW++P+ ++    LP G     DG  RPVLL    W + YF  +N D+ ++ +PFQD
Sbjct:  395 EIPRFAPECFAYLENPVSGNSKRFSSGLTQLLQEGVIQCYELPSAMRRVPLLGAVGPLQFDIVQYRLESEYGVTSRIVSAPWSLSRWLSPTADVTTLKLPQGACPVLDGQGRPVLLLSDDWSLRYFQMQNPDVQVSDIPFQD 536          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A7X7SB55_9BACT (Peptide chain release factor 3 n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7SB55_9BACT)

HSP 1 Score: 162 bits (409), Expect = 1.500e-44
Identity = 76/141 (53.90%), Postives = 99/141 (70.21%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVE-IVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLP 140
            D +P FAPECF ++ +  P Q KRFR GL+ LLQEG +Q +++PD+    PLLGA GPLQFE++Q+RLE+EYGA TRL+ APW   RWV P+ E +    LP G RLA D  +RPV LF + W +N+FMEK+  + L KLP
Sbjct:  385 DPLPQFAPECFAWLHHSSPAQFKRFRAGLDHLLQEGAVQAFQIPDSATRAPLLGAVGPLQFEVLQYRLETEYGATTRLEPAPWKLLRWVDPAGEPVTSDALPSGARLAIDALQRPVALFSADWELNFFMEKHPQVLLRKLP 525          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A6N6PFQ2_9BACT (Peptide chain release factor 3 n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6PFQ2_9BACT)

HSP 1 Score: 160 bits (405), Expect = 5.610e-44
Identity = 76/140 (54.29%), Postives = 98/140 (70.00%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLP 140
            DEIP FAPECF Y++N +P + K+FR G++QLLQEGV+Q + L DAV+ VPLL A GPLQFE+VQ+RLE+EYGA +RL++A W   +W+ P  E  G   P G RLAYD   +P +LF S W   YF E+N  + L  LP
Sbjct:  393 DEIPRFAPECFAYLQNPNPGKFKQFRQGVDQLLQEGVVQVFELRDAVQKVPLLAAVGPLQFEVVQYRLEAEYGAPSRLENASWACFKWLPPGTETAGLKFPTGCRLAYDSAGQPGVLFPSAWTQKYFTEQNGGLPLLDLP 532          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A7X7F7E3_9BACT (Peptide chain release factor 3 n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7F7E3_9BACT)

HSP 1 Score: 159 bits (401), Expect = 2.690e-43
Identity = 81/140 (57.86%), Postives = 92/140 (65.71%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLP 140
            DEIP FAPECF  IEN  P   KRFR GL+QLLQEGV+Q+Y LPD  R V LLGA GPLQFEIV+ RLESEY A +R+Q  PWT  RW  P     G  LP G RLA D   R V+LFE+ W + +F E + DI L   P
Sbjct:  393 DEIPRFAPECFAIIENPTPSAFKRFRKGLDQLLQEGVIQRYELPDLARKVTLLGAVGPLQFEIVKFRLESEYDAPSRIQAVPWTLVRWFDPDTRTDGISLPSGARLAEDDQGRTVILFENDWGLRFFKEDHPDIPLGDRP 532          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A7V3ACS4_9BACT (Peptide chain release factor 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3ACS4_9BACT)

HSP 1 Score: 155 bits (393), Expect = 2.930e-42
Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLPFQ 142
            DEI  FAPECF Y+E+  P   +RFRTGL+QLLQEGV+QQ+ +P   R VPLLGA GPLQ ++VQ+RLESEYGA +RL+  PW+ +RW+ P+       +  G  LA D   RPV+LF+  W + YF  +N D+ L+++P++
Sbjct:  390 DEISRFAPECFVYLESPVPAHYRRFRTGLDQLLQEGVVQQFTIPSDERGVPLLGAVGPLQIDVVQYRLESEYGAASRLEATPWSRSRWLDPATPKEKLNIASGACLAADSAGRPVVLFKDDWYLQYFARQNKDVGLSEVPYR 531          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A1V6JD01_9BACT (Peptide chain release factor 3 n=1 Tax=Verrucomicrobia bacterium ADurb.Bin018 TaxID=1852925 RepID=A0A1V6JD01_9BACT)

HSP 1 Score: 150 bits (380), Expect = 3.810e-42
Identity = 74/141 (52.48%), Postives = 94/141 (66.67%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKP-LPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLP 140
            D +P FA ECF ++ +  P Q KRFR GL+ LLQEG +Q + LPD+    PLLGA GPLQFE++Q+RLE+EYGA TR + APWT  RWV P+ E V    LP   RLA+D   RPV LF + W + +F EKN  + L +LP
Sbjct:  170 DPLPQFAAECFAWLHHASPAQFKRFRAGLDHLLQEGAVQTFTLPDSGSRAPLLGAVGPLQFEVLQYRLENEYGAVTRREAAPWTILRWVDPAGEPVSPTMLPSSCRLAFDTANRPVALFSADWELKFFQEKNPRVILQRLP 310          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A3C1C2T6_9BACT (Peptide chain release factor 3 n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3C1C2T6_9BACT)

HSP 1 Score: 155 bits (391), Expect = 5.480e-42
Identity = 74/141 (52.48%), Postives = 96/141 (68.09%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPS-VEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLP 140
            D +P FA ECF Y+ +  P Q KRFR GL+ LLQEG +Q + +PD+    PLLGA GPLQFE++Q+RLESEYGA TRL+ APW+  RW+ P+   I    LP   RLA D ++RPV LF + W + +F+EKN  + L KLP
Sbjct:  385 DPLPQFAAECFAYLHHSSPAQFKRFRAGLDHLLQEGAVQTFTIPDSGSRAPLLGAVGPLQFEVLQYRLESEYGATTRLEPAPWSILRWIDPAGAPITPDMLPSSCRLALDAHDRPVALFSAAWELKFFVEKNPKVVLHKLP 525          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A832H881_9BACT (Peptide chain release factor 3 n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A832H881_9BACT)

HSP 1 Score: 153 bits (387), Expect = 2.100e-41
Identity = 75/143 (52.45%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    1 DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWV--APSVEIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLPF 141
            DEIP FAPECF Y+ N    QSKRFR GLEQLL EGV+Q + LP AV+ + LLGA GPLQFE+VQ+RLESEY A++RL+ APW   RW+      + +   LP G  +A D  ++PV LF   W + +F+E+N    L+ LPF
Sbjct:  385 DEIPRFAPECFAYLHNSSTAQSKRFREGLEQLLAEGVVQSFSLPHAVQRIALLGAVGPLQFEVVQYRLESEYAAQSRLEPAPWRVARWLHHPAGADPMACNLPTGTTIALDAQDQPVALFPEEWPVKFFLERNEGWQLSPLPF 527          
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Match: A0A832K6C5_9BACT (Peptide chain release factor 3 n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832K6C5_9BACT)

HSP 1 Score: 153 bits (386), Expect = 3.560e-41
Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 0
Query:    2 EIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNVPLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSV--EIVGKPLPPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLPFQ 142
            EIP F PECF ++++    Q KRFR GL+QLLQEGV+Q ++LPDA + VPLLGA GPLQFE+VQ+R+++EYGAE+RL+  PW   RW +P+    +    LP G RLAYD    PV+LF   W   +F E+N  I L+ LP Q
Sbjct:  387 EIPRFTPECFAWLQSPSTAQFKRFREGLDQLLQEGVVQAFQLPDAAQRVPLLGAVGPLQFEVVQYRMQTEYGAESRLEPGPWKILRWASPANGDRLDPNQLPTGARLAYDVAGHPVVLFPEQWSCEFFAERNPGIRLSALPPQ 529          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100671.155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8ULJ6_9BACT2.720e-4858.74Peptide chain release factor 3 n=1 Tax=Planctomyce... [more]
A0A7C1EAR3_9BACT1.180e-4554.93Peptide chain release factor 3 n=1 Tax=Phycisphaer... [more]
A0A7X7SB55_9BACT1.500e-4453.90Peptide chain release factor 3 n=1 Tax=Lentisphaer... [more]
A0A6N6PFQ2_9BACT5.610e-4454.29Peptide chain release factor 3 n=1 Tax=Verrucomicr... [more]
A0A7X7F7E3_9BACT2.690e-4357.86Peptide chain release factor 3 n=1 Tax=Lentisphaer... [more]
A0A7V3ACS4_9BACT2.930e-4250.70Peptide chain release factor 3 n=1 Tax=Planctomyce... [more]
A0A1V6JD01_9BACT3.810e-4252.48Peptide chain release factor 3 n=1 Tax=Verrucomicr... [more]
A0A3C1C2T6_9BACT5.480e-4252.48Peptide chain release factor 3 n=1 Tax=Verrucomicr... [more]
A0A832H881_9BACT2.100e-4152.45Peptide chain release factor 3 n=1 Tax=Verrucomicr... [more]
A0A832K6C5_9BACT3.560e-4152.45Peptide chain release factor 3 n=1 Tax=Verrucomicr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038467Peptide chain release factor 3, C-terminal domain superfamilyGENE3D3.30.70.3280coord: 3..140
e-value: 6.4E-40
score: 138.0
IPR032090Peptide chain release factor 3, C-terminalPFAMPF16658RF3_Ccoord: 2..127
e-value: 2.3E-34
score: 118.0
IPR004548Peptide chain release factor 3PANTHERPTHR43556FAMILY NOT NAMEDcoord: 2..139
IPR035647EF-G domain III/V-likeSUPERFAMILY54980EF-G C-terminal domain-likecoord: 5..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100671contigM-pyrifera_M_contig100671:246..677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100671.155.1mRNA_M-pyrifera_M_contig100671.155.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100671 246..677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100671.155.1 ID=prot_M-pyrifera_M_contig100671.155.1|Name=mRNA_M-pyrifera_M_contig100671.155.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
DEIPFFAPECFTYIENVHPVQSKRFRTGLEQLLQEGVMQQYRLPDAVRNV
PLLGAAGPLQFEIVQHRLESEYGAETRLQHAPWTETRWVAPSVEIVGKPL
PPGVRLAYDGNERPVLLFESTWVMNYFMEKNLDISLAKLPFQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038467RF3_C_sf
IPR032090RF3_C
IPR004548PrfC
IPR035647EFG_III/V