mRNA_M-pyrifera_M_contig106924.1484.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A0M0K731_9EUKA (Wd40 repeat-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K731_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 1.120e-18 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDVAAAAP 237
VRDVQ+ P RFAAAL+NGA+Q +D+R ++P+ AH + L WHP +LATGGRD+ VRVWD++AA P
Sbjct: 142 VRDVQFCPH--APTRFAAALENGAVQFFDVRSNKQPLLQLQAHQGPVYCLEWHPEERNVLATGGRDKAVRVWDLSAALP 218
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: UPI000D72C5EE (GATOR complex protein WDR24-like isoform X4 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72C5EE) HSP 1 Score: 88.2 bits (217), Expect = 1.720e-18 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDVA 225
VRD+Q+ P G FAAA +NG +Q+WD+R+P R F+AHN+ + +L WHP LAT GRD++++VWDV+
Sbjct: 220 VRDIQFSPPNLGYFTFAAAYENGIVQIWDMRRPDRCEKQFTAHNEPVFSLDWHPEDKSWLATAGRDKMIKVWDVS 294
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A2T7PAR7_POMCA (GATOR complex protein WDR24 n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PAR7_POMCA) HSP 1 Score: 88.2 bits (217), Expect = 1.740e-18 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDVA 225
VRD+Q+ P G FAAA +NG +Q+WD+R+P R F+AHN+ + +L WHP LAT GRD++++VWDV+
Sbjct: 210 VRDIQFSPPNLGYFTFAAAYENGIVQIWDMRRPDRCEKQFTAHNEPVFSLDWHPEDKSWLATAGRDKMIKVWDVS 284
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A5D6XR99_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR99_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.550e-17 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDV 222
VRDV+ P RFAAA +NG +QVWD+R+ +P F+AH +++AL WHP P +LA+GGRDR V++WD+
Sbjct: 152 VRDVRMSPF--DPHRFAAAFENGIVQVWDIRKNAQPQLKFTAHKGLVLALDWHPTRPHVLASGGRDRYVKIWDL 223
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A067BHR4_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BHR4_SAPPC) HSP 1 Score: 83.6 bits (205), Expect = 2.140e-17 Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDV 222
VRDV++ P G+ +FAAA +NG ++VW+L ++P F+AH I++L WHP P ++ATG RDR V++WD+
Sbjct: 157 VRDVKFSPY--GDTKFAAAFENGTVEVWELGNNKKPEITFTAHQGHILSLDWHPTQPSVIATGSRDRSVKIWDL 228
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A0L8HFI6_OCTBM (GATOR complex protein WDR24 n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8HFI6_OCTBM) HSP 1 Score: 84.7 bits (208), Expect = 2.860e-17 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDV 222
VRDVQ+ P G RFAA L+NG +Q WD+R+P RP +AH + L W+P LATGGRDR ++VWD+
Sbjct: 169 VRDVQFCPQSSGYFRFAAGLENGIVQEWDIRRPDRPDREITAHTGPVFTLDWNPMDKNWLATGGRDRAIKVWDM 242
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A7E6FFZ1_OCTVU (GATOR complex protein WDR24 n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6FFZ1_OCTVU) HSP 1 Score: 84.3 bits (207), Expect = 3.800e-17 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDV 222
VRDVQ+ P G RFAA L+NG +Q WD+R+P RP AH + L W+P LATGGRDR +RVWD+
Sbjct: 49 VRDVQFCPHSSGYFRFAAGLENGIVQEWDIRRPDRPDREIIAHTGPVFTLDWNPMDKNWLATGGRDRAIRVWDM 122
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A812D905_SEPPH (GATOR complex protein WDR24 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812D905_SEPPH) HSP 1 Score: 84.3 bits (207), Expect = 3.920e-17 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHP---NWPGILATGGRDRVVRVWDV 222
VRDVQ+ P G RFAA L+NG +Q WD+R+P RP +AH + L W+P NW LATGGRDR ++VWD+
Sbjct: 179 VRDVQFCPQTDGYFRFAAGLENGIVQEWDIRRPDRPEREITAHTGPVFTLDWNPIDKNW---LATGGRDRAIKVWDL 252
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: UPI001401DF19 (GATOR complex protein WDR24 isoform X1 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001401DF19) HSP 1 Score: 84.0 bits (206), Expect = 5.340e-17 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 VRDVQWDPSRGGEC-RFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDVAAA 231
VRDVQ+ P +C FAA +NG +Q+WD+R+ R F+AHN + WHP+ G LATGGRD++V+VWDVA+A
Sbjct: 212 VRDVQFSPR---DCFSFAATFENGNVQLWDIRRSDRAERMFTAHNGPVFTCDWHPDERGWLATGGRDKLVKVWDVASA 286
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Match: A0A8C4R702_EPTBU (GATOR complex protein WDR24 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R702_EPTBU) HSP 1 Score: 83.6 bits (205), Expect = 7.210e-17 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 1 VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALAWHPNWPGILATGGRDRVVRVWDVAAAAP 237
VRDVQ+ P FAA+ +NG +Q+WDLR+ R F+AHN + + WHP G LATGGRD++V+VWD+A+A P
Sbjct: 160 VRDVQFSPR--DYFAFAASFENGNVQLWDLRRSDRCERMFTAHNGPVFSCDWHPEDRGWLATGGRDKMVKVWDMASARP 236 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106924.1484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106924.1484.1 >prot_M-pyrifera_M_contig106924.1484.1 ID=prot_M-pyrifera_M_contig106924.1484.1|Name=mRNA_M-pyrifera_M_contig106924.1484.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp VRDVQWDPSRGGECRFAAALDNGAIQVWDLRQPRRPVGYFSAHNDMIVALback to top mRNA from alignment at M-pyrifera_M_contig106924:171..428+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106924.1484.1 ID=mRNA_M-pyrifera_M_contig106924.1484.1|Name=mRNA_M-pyrifera_M_contig106924.1484.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig106924:171..428+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106924:171..428+ >mRNA_M-pyrifera_M_contig106924.1484.1 ID=mRNA_M-pyrifera_M_contig106924.1484.1|Name=mRNA_M-pyrifera_M_contig106924.1484.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig106924:171..428+ (Macrocystis pyrifera P11B4 male)back to top |