prot_M-pyrifera_M_contig100559.126.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100559.126.1
Unique Nameprot_M-pyrifera_M_contig100559.126.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
BLAST of mRNA_M-pyrifera_M_contig100559.126.1 vs. uniprot
Match: A0A067CU98_SAPPC (Trafficking protein particle complex subunit 2-like protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU98_SAPPC)

HSP 1 Score: 64.7 bits (156), Expect = 3.330e-11
Identity = 27/74 (36.49%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   12 KVFGYVPSTGIRLFLITRELPLRESALRALLAEVHRVYADTISNPFCAPDAPITSERFKKRLDDLFTKAVQTLE 85
            +V+GYV +T ++L ++ ++ P++ES +R L AE+H++Y + +SNPF      ITSE+F+ ++ +L  +   T+E
Sbjct:   62 RVYGYVTNTLVKLVVVVQDAPIKESEMRVLFAELHKLYVNAMSNPFAIIGERITSEKFESKVYNLILQHNHTIE 135          
BLAST of mRNA_M-pyrifera_M_contig100559.126.1 vs. uniprot
Match: A0A484EFD6_BRELC (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFD6_BRELC)

HSP 1 Score: 63.2 bits (152), Expect = 1.380e-10
Identity = 28/76 (36.84%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 FVNILLTHELQKVFGYVPSTGIRLFLITRELPLRESALRALLAEVHRVYADTISNPFCAPDAPITSERFKKRLDDL 76
            ++  L T E  +V+GYV +T I+  ++ ++ P+RES LR L  E+HR+Y + +SNPF      +TS+ F K++  +
Sbjct:   57 YLGFLGTIEDYRVYGYVTNTSIKFVVVLQDAPVRESELRPLFLEIHRLYVNAMSNPFAPLGERLTSQTFDKQVSHI 132          
BLAST of mRNA_M-pyrifera_M_contig100559.126.1 vs. uniprot
Match: M4B9A4_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9A4_HYAAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.550e-10
Identity = 27/68 (39.71%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    9 ELQKVFGYVPSTGIRLFLITRELPLRESALRALLAEVHRVYADTISNPFCAPDAPITSERFKKRLDDL 76
            E  +V+GYV ++ ++  ++ ++ P+RE  LR+LLAEVH +Y + +SNPF      +TS+ F KR+ +L
Sbjct:   10 EDYRVYGYVTNSSVKFVVLLQDAPVREVELRSLLAEVHHLYVNAMSNPFTPLGERLTSQMFDKRVSNL 77          
BLAST of mRNA_M-pyrifera_M_contig100559.126.1 vs. uniprot
Match: A0A1V9Y706_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y706_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.770e-9
Identity = 26/77 (33.77%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    9 ELQKVFGYVPSTGIRLFLITRELPLRESALRALLAEVHRVYADTISNPFCAPDAPITSERFKKRLDDLFTKAVQTLE 85
            E  +V+GYV +T +++ ++ ++ P++ES +R L  E+H++Y + +SNPF      I SE+F+K++ +L  +    LE
Sbjct:   74 EDYRVYGYVTNTLVKIIVVVQDAPIKESEMRNLFTELHKLYVNAMSNPFAIIGERIKSEKFEKKVYNLVLQHNHMLE 150          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100559.126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A067CU98_SAPPC3.330e-1136.49Trafficking protein particle complex subunit 2-lik... [more]
A0A484EFD6_BRELC1.380e-1036.84Trafficking protein particle complex subunit 2-lik... [more]
M4B9A4_HYAAE1.550e-1039.71Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A1V9Y706_9STRA2.770e-933.77Trafficking protein particle complex subunit 2-lik... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 11..78
e-value: 3.7E-12
score: 46.5
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403MBP-1 INTERACTING PROTEIN-2Acoord: 2..80
NoneNo IPR availableGENE3D3.30.450.70coord: 1..81
e-value: 4.0E-15
score: 58.0
NoneNo IPR availablePANTHERPTHR12403:SF11TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2-LIKE PROTEINcoord: 2..80
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 6..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100559contigM-pyrifera_M_contig100559:4..282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100559.126.1mRNA_M-pyrifera_M_contig100559.126.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100559 4..282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100559.126.1 ID=prot_M-pyrifera_M_contig100559.126.1|Name=mRNA_M-pyrifera_M_contig100559.126.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
FVNILLTHELQKVFGYVPSTGIRLFLITRELPLRESALRALLAEVHRVYA
DTISNPFCAPDAPITSERFKKRLDDLFTKAVQTLEYVPTPSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR011012Longin-like_dom_sf