prot_M-pyrifera_M_contig100543.122.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100543.122.1
Unique Nameprot_M-pyrifera_M_contig100543.122.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A3D5D9J2_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5D9J2_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 4.140e-90
Identity = 132/219 (60.27%), Postives = 165/219 (75.34%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            M+ A G+EYDG+ F GWQRQ +GRTVQA +E+ALS +A+  + T CAGRTDAGVHA  QV+H D   +R  R+WVLG N+ LP DIS+QWAR VD EFHARF+AE R YRY+ICNR  RPGL   KV+ ++  LDA  M  AAR L+G  DF+SFRA+GCQ+ H++R+V  I +RR G+ + + I ANAFLQHMVRN+VGTLL VG GR+ P+WV QVL
Sbjct:    1 MKFAFGVEYDGSNFVGWQRQTSGRTVQACMEKALSTVADESIRTYCAGRTDAGVHATGQVIHIDTTVKRTSRSWVLGANSNLPNDISVQWAREVDTEFHARFSAEGRTYRYIICNRMARPGLWKNKVSFVYKPLDAGLMLQAARCLVGYHDFTSFRASGCQSLHSMRKVNRIDIRRSGDLLTIVIEANAFLQHMVRNVVGTLLCVGDGRKPPEWVQQVL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A7C1U1H6_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1U1H6_9GAMM)

HSP 1 Score: 273 bits (699), Expect = 9.070e-90
Identity = 137/219 (62.56%), Postives = 161/219 (73.52%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            MRIALG+EYDG+ F GWQ Q +  +VQ A++ ALSK+A+ PV   CAGRTD+GVHA AQVVHFD  AERP  AWVLG NA LP  +S+ WA+ VD +FHARF A AR+YRYVI NR  RP +L  +V  +H  LD  AM  AA+ LLGE DFSSFRA  CQARHAVR V  + V R GEF+ + I ANAFL HMVRNI GTL+ VG+G REP WVA+VL
Sbjct:    1 MRIALGIEYDGSAFCGWQTQSHAPSVQDALQAALSKVADHPVKVVCAGRTDSGVHATAQVVHFDTRAERPLHAWVLGGNANLPDSVSVTWAQAVDQDFHARFKATARSYRYVILNRKVRPAVLRKRVCWMHHALDEAAMQTAAQALLGEHDFSSFRALACQARHAVRRVHRLDVSRSGEFIYIDIEANAFLHHMVRNIAGTLMAVGRGDREPGWVAEVL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: H1G5Z6_9GAMM (tRNA pseudouridine synthase A n=5 Tax=Ectothiorhodospira TaxID=1051 RepID=H1G5Z6_9GAMM)

HSP 1 Score: 272 bits (696), Expect = 3.260e-89
Identity = 133/219 (60.73%), Postives = 163/219 (74.43%), Query Frame = 0
Query:    2 RIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVLE 220
            R+A+GLEYDG+GF GWQ+Q +GRT+Q  VERAL+K+A+ PV   CAGRTDAGVHA  Q+VHFD  A+RP  AW+LG N+ L  +IS+QW R V  +FHARF+A  R YRYV  NR  RP +L G+VT  H  L A  M  AA+ LLGE DFSSFRA GCQARH +REVQS++V RDG+F+ L I ANAFL HMVRNI G L+ VG+G R  DW+A++ E
Sbjct:    7 RLAIGLEYDGSGFRGWQQQKDGRTIQPLVERALAKVADHPVQVTCAGRTDAGVHATCQIVHFDTTADRPPHAWLLGGNSNLTPEISLQWVRPVAPDFHARFSARWRRYRYVFLNRLARPAVLRGRVTWYHRPLAAEPMHEAAQHLLGEHDFSSFRALGCQARHPIREVQSVSVTRDGDFIYLDIRANAFLHHMVRNIAGALMCVGRGERPSDWLAELRE 225          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A3N1Y1Z6_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1Y1Z6_9GAMM)

HSP 1 Score: 270 bits (691), Expect = 1.590e-88
Identity = 133/220 (60.45%), Postives = 157/220 (71.36%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVLE 220
            MR+ALG+EYDG+ F GWQ QD  RTVQA +ERALS +A+ PV   CAGRTDAGVHA AQVVHFD  A R  R+WVLG N  LP D+ ++WAR V   FHARF+A AR YRYVI NR  RP L  G+V  +H  LDA  M  AA  L+GE DFS+FRA  CQARH VRE++ + VRR G+ VIL   ANAFL HMVRNI G L+ +G+G+R P W  +VLE
Sbjct:    1 MRVALGVEYDGSAFRGWQAQDGERTVQAELERALSVVADAPVRVVCAGRTDAGVHATAQVVHFDTEARRSPRSWVLGANVNLPPDVGVRWAREVPEAFHARFSATARRYRYVILNRMDRPALARGRVAWVHRPLDAARMAEAAAHLVGEHDFSAFRAVACQARHPVRELRELTVRRAGDLVILEAEANAFLHHMVRNIAGVLIDIGRGKRPPSWAREVLE 220          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: UPI001BBD53F5 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Sulfuritalea sp. TaxID=2480090 RepID=UPI001BBD53F5)

HSP 1 Score: 264 bits (675), Expect = 4.710e-86
Identity = 131/219 (59.82%), Postives = 159/219 (72.60%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            MR+ALGLEYDG GF GWQ Q  G TVQ A+ERAL+ IA  PV T CAGRTDAGVHA AQVVHFD AAERP  AWV G NA LP  ++++WA  V  EFHARF A AR+YRY++ NR  RPGLL GKV   H  LD  AM AAA+ L+GERDFS+FR++ CQA+  V+ +  + + R G+ ++L   ANAFL HMVRN+VG L+ VG GR  P W+A++L
Sbjct:    1 MRVALGLEYDGAGFFGWQSQPGGNTVQDALERALAVIAGAPVATVCAGRTDAGVHATAQVVHFDVAAERPMSAWVRGVNAHLPASVAVRWAMPVASEFHARFAARARSYRYLLLNRRERPGLLNGKVGWCHRPLDVEAMQAAAQSLIGERDFSAFRSSECQAKSPVKILHRLDIARQGDLIVLDCCANAFLHHMVRNLVGALVYVGTGRESPAWLARLL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A7C5XSG8_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XSG8_9GAMM)

HSP 1 Score: 263 bits (673), Expect = 1.080e-85
Identity = 134/220 (60.91%), Postives = 162/220 (73.64%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIH-TLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            MRIA+G+EYDG+GFAGWQRQ + R+VQA VE AL+++A  PV T+CAGRTDAGVHAC QVVHFD  A RP+RAWVLGTNA LP D++++WAR V+  F ARF+A AR YRY+I     RP LL  +    H   LD   M  AAR LLGE DFS+FRAAGCQARHAVR V  + V R G+ V L I ANAFL HMVR +VG+LL VG+G R  +W+ ++L
Sbjct:    1 MRIAIGIEYDGSGFAGWQRQAHARSVQACVEAALARVAGHPVATRCAGRTDAGVHACGQVVHFDTEAVRPDRAWVLGTNAHLPGDVAVRWARAVEEGFDARFSATARVYRYLIAEGPARPALLRHRAAWHHGPRLDEARMAEAARALLGEHDFSAFRAAGCQARHAVRAVSRLEVGRAGDVVWLEIEANAFLHHMVRIVVGSLLLVGRGERPVEWIGELL 220          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: UPI0004113801 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Aestuariibacter salexigens TaxID=226010 RepID=UPI0004113801)

HSP 1 Score: 263 bits (672), Expect = 1.220e-85
Identity = 130/219 (59.36%), Postives = 160/219 (73.06%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            MRIALG+EYDG  F GWQRQ    ++Q  +E ALSK+AN P+  QCAGRTDAGVHA  QVVHFDC  ERPERAW LG NA LP  I+I+WAR VD EFHARF+A AR YRY+I N   R G+LT  VTH+H  LDA  M  AA+ LLGE+DF+SFRAA CQ++   R V +++V R  ++V++ I ANAFL HMVRNI G+L+ +G G R   W+A++L
Sbjct:    1 MRIALGVEYDGAAFYGWQRQREVSSIQQHIESALSKVANTPIEVQCAGRTDAGVHATYQVVHFDCPVERPERAWTLGMNANLPDSIAIKWARQVDDEFHARFSATARRYRYLIYNNKMRSGILTRGVTHVHRHLDADKMHRAAQCLLGEQDFTSFRAALCQSKTPFRNVMAVSVFRQAQYVVIDIQANAFLHHMVRNITGSLIEIGCGHRPESWLAELL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A7Y1TFB9_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1TFB9_9GAMM)

HSP 1 Score: 262 bits (670), Expect = 2.530e-85
Identity = 131/220 (59.55%), Postives = 162/220 (73.64%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVLE 220
            MRIALG+EYDGTG+ GWQRQ  G  VQ  +E ALS IAN  V   CAGRTD GVHA  QVVHFD ++ER  R W+LG N++LP DIS+ W + VD +FHARF+A AR+YRY I NR  R  L   +   ++  LDA AM AAAR+LLG  DFS+FRAAGCQA  A RE+  IAV+R+G+++ LT+TANAFLQHMVRNI GTL+ +G G R+ +WV +VL+
Sbjct:    1 MRIALGIEYDGTGYNGWQRQKTGLGVQQRLEEALSLIANETVEVVCAGRTDTGVHATGQVVHFDTSSERSRRGWLLGANSSLPNDISVTWVKPVDDDFHARFSATARSYRYRIINRLERSALYRERAWWVYEPLDANAMHAAARQLLGRHDFSAFRAAGCQASTAEREISRIAVQREGDWITLTVTANAFLQHMVRNIAGTLVAIGLGERDFEWVGEVLQ 220          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A3M1UM16_9GAMM (tRNA pseudouridine synthase A n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3M1UM16_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 3.250e-85
Identity = 133/219 (60.73%), Postives = 156/219 (71.23%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            MRIALG+EYDGT F GWQ QD+ R+VQ  VE ALSK+A+ PV T CAGRTD GVHA AQVVHFD  A RPE AWV+G N  LPR +SI+WAR V  +FHAR++A AR YRY+I NR  RP LL  +V      LDA  M  A   LLGE DFS+FRAAGCQA+H VR ++ + V R GE + + +TANAFL HMVRNI GTL+ VG+G    DWV  VL
Sbjct:    1 MRIALGIEYDGTVFCGWQYQDHCRSVQQVVEAALSKVADHPVRTVCAGRTDTGVHATAQVVHFDTPAVRPEHAWVMGGNVHLPRAVSIRWARVVPEDFHARYSATARTYRYLILNRGQRPALLRRRVCWEFRPLDAERMQEAGALLLGEHDFSAFRAAGCQAKHPVRRIERLEVARHGELIRIDVTANAFLHHMVRNIAGTLMKVGRGEAPVDWVGAVL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: B8GQE2_THISH (tRNA pseudouridine synthase A n=3 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GQE2_THISH)

HSP 1 Score: 261 bits (666), Expect = 9.280e-85
Identity = 132/219 (60.27%), Postives = 162/219 (73.97%), Query Frame = 0
Query:    1 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 219
            MRIALG+EYDG+GF GWQ Q  GR VQA VE+ALS++AN PV   CAGRTDAGVHA AQV+HFD  + R  R+WVLG N  LP +IS+ WA+ VD +F ARF+A +R YRYVI NR  RPG+L  KV+  H  LDA  M AA +RLLGE DF+SFRA GCQA+  VR + S++V R G+F+ L + ANAFL HMVRNI G L+ VG+G R  +WV++VL
Sbjct:    2 MRIALGVEYDGSGFCGWQTQLQGRAVQACVEQALSRVANHPVSVVCAGRTDAGVHATAQVIHFDTESVRTARSWVLGGNTHLPPEISLLWAKEVDADFSARFSARSRRYRYVILNRWVRPGVLHRKVSWHHPPLDAERMHAAGQRLLGEWDFTSFRAVGCQAKSPVRTLLSLSVTRRGDFIYLDVHANAFLHHMVRNIAGVLMAVGEGERPVEWVSEVL 220          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5D9J2_9GAMM4.140e-9060.27tRNA pseudouridine synthase A n=1 Tax=Gammaproteob... [more]
A0A7C1U1H6_9GAMM9.070e-9062.56tRNA pseudouridine synthase A n=1 Tax=Thiotrichale... [more]
H1G5Z6_9GAMM3.260e-8960.73tRNA pseudouridine synthase A n=5 Tax=Ectothiorhod... [more]
A0A3N1Y1Z6_9GAMM1.590e-8860.45tRNA pseudouridine synthase A n=1 Tax=Inmirania th... [more]
UPI001BBD53F54.710e-8659.82tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Su... [more]
A0A7C5XSG8_9GAMM1.080e-8560.91tRNA pseudouridine synthase A n=1 Tax=Chromatiales... [more]
UPI00041138011.220e-8559.36tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Ae... [more]
A0A7Y1TFB9_9GAMM2.530e-8559.55tRNA pseudouridine synthase A n=1 Tax=Woeseiaceae ... [more]
A0A3M1UM16_9GAMM3.250e-8560.73tRNA pseudouridine synthase A n=2 Tax=Gammaproteob... [more]
B8GQE2_THISH9.280e-8560.27tRNA pseudouridine synthase A n=3 Tax=Thioalkalivi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 8..102
e-value: 1.8E-6
score: 28.3
coord: 142..220
e-value: 1.7E-22
score: 79.9
NoneNo IPR availableGENE3D3.30.70.580coord: 1..104
e-value: 4.6E-38
score: 131.8
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASEcoord: 2..220
IPR001406Pseudouridine synthase I, TruAPIRSFPIRSF001430PSU-Acoord: 1..220
e-value: 8.0E-66
score: 220.0
IPR001406Pseudouridine synthase I, TruATIGRFAMTIGR00071TIGR00071coord: 2..219
e-value: 2.4E-65
score: 218.4
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 2..220
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 1..220
score: 28.237
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 105..220
e-value: 3.9E-38
score: 132.2
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 1..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100543contigM-pyrifera_M_contig100543:18..677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100543.122.1mRNA_M-pyrifera_M_contig100543.122.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100543 9..677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100543.122.1 ID=prot_M-pyrifera_M_contig100543.122.1|Name=mRNA_M-pyrifera_M_contig100543.122.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRT
DAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHA
RFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGER
DFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVG
TLLPVGQGRREPDWVAQVLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR001406PsdUridine_synth_TruA
IPR020095PsdUridine_synth_TruA_C
IPR020103PsdUridine_synth_cat_dom_sf