mRNA_M-pyrifera_M_contig100543.122.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100543.122.1
Unique NamemRNA_M-pyrifera_M_contig100543.122.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A3D5D9J2_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5D9J2_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 4.650e-90
Identity = 132/219 (60.27%), Postives = 165/219 (75.34%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            M+ A G+EYDG+ F GWQRQ +GRTVQA +E+ALS +A+  + T CAGRTDAGVHA  QV+H D   +R  R+WVLG N+ LP DIS+QWAR VD EFHARF+AE R YRY+ICNR  RPGL   KV+ ++  LDA  M  AAR L+G  DF+SFRA+GCQ+ H++R+V  I +RR G+ + + I ANAFLQHMVRN+VGTLL VG GR+ P+WV QVL
Sbjct:    1 MKFAFGVEYDGSNFVGWQRQTSGRTVQACMEKALSTVADESIRTYCAGRTDAGVHATGQVIHIDTTVKRTSRSWVLGANSNLPNDISVQWAREVDTEFHARFSAEGRTYRYIICNRMARPGLWKNKVSFVYKPLDAGLMLQAARCLVGYHDFTSFRASGCQSLHSMRKVNRIDIRRSGDLLTIVIEANAFLQHMVRNVVGTLLCVGDGRKPPEWVQQVL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: H1G5Z6_9GAMM (tRNA pseudouridine synthase A n=5 Tax=Ectothiorhodospira TaxID=1051 RepID=H1G5Z6_9GAMM)

HSP 1 Score: 274 bits (701), Expect = 6.380e-90
Identity = 134/223 (60.09%), Postives = 164/223 (73.54%), Query Frame = 1
Query:    1 DVAMRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVLE 669
            D   R+A+GLEYDG+GF GWQ+Q +GRT+Q  VERAL+K+A+ PV   CAGRTDAGVHA  Q+VHFD  A+RP  AW+LG N+ L  +IS+QW R V  +FHARF+A  R YRYV  NR  RP +L G+VT  H  L A  M  AA+ LLGE DFSSFRA GCQARH +REVQS++V RDG+F+ L I ANAFL HMVRNI G L+ VG+G R  DW+A++ E
Sbjct:    3 DTPRRLAIGLEYDGSGFRGWQQQKDGRTIQPLVERALAKVADHPVQVTCAGRTDAGVHATCQIVHFDTTADRPPHAWLLGGNSNLTPEISLQWVRPVAPDFHARFSARWRRYRYVFLNRLARPAVLRGRVTWYHRPLAAEPMHEAAQHLLGEHDFSSFRALGCQARHPIREVQSVSVTRDGDFIYLDIRANAFLHHMVRNIAGALMCVGRGERPSDWLAELRE 225          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A7C1U1H6_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1U1H6_9GAMM)

HSP 1 Score: 273 bits (699), Expect = 1.020e-89
Identity = 137/219 (62.56%), Postives = 161/219 (73.52%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            MRIALG+EYDG+ F GWQ Q +  +VQ A++ ALSK+A+ PV   CAGRTD+GVHA AQVVHFD  AERP  AWVLG NA LP  +S+ WA+ VD +FHARF A AR+YRYVI NR  RP +L  +V  +H  LD  AM  AA+ LLGE DFSSFRA  CQARHAVR V  + V R GEF+ + I ANAFL HMVRNI GTL+ VG+G REP WVA+VL
Sbjct:    1 MRIALGIEYDGSAFCGWQTQSHAPSVQDALQAALSKVADHPVKVVCAGRTDSGVHATAQVVHFDTRAERPLHAWVLGGNANLPDSVSVTWAQAVDQDFHARFKATARSYRYVILNRKVRPAVLRKRVCWMHHALDEAAMQTAAQALLGEHDFSSFRALACQARHAVRRVHRLDVSRSGEFIYIDIEANAFLHHMVRNIAGTLMAVGRGDREPGWVAEVL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A3N1Y1Z6_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1Y1Z6_9GAMM)

HSP 1 Score: 270 bits (691), Expect = 1.780e-88
Identity = 133/220 (60.45%), Postives = 157/220 (71.36%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVLE 669
            MR+ALG+EYDG+ F GWQ QD  RTVQA +ERALS +A+ PV   CAGRTDAGVHA AQVVHFD  A R  R+WVLG N  LP D+ ++WAR V   FHARF+A AR YRYVI NR  RP L  G+V  +H  LDA  M  AA  L+GE DFS+FRA  CQARH VRE++ + VRR G+ VIL   ANAFL HMVRNI G L+ +G+G+R P W  +VLE
Sbjct:    1 MRVALGVEYDGSAFRGWQAQDGERTVQAELERALSVVADAPVRVVCAGRTDAGVHATAQVVHFDTEARRSPRSWVLGANVNLPPDVGVRWAREVPEAFHARFSATARRYRYVILNRMDRPALARGRVAWVHRPLDAARMAEAAAHLVGEHDFSAFRAVACQARHPVRELRELTVRRAGDLVILEAEANAFLHHMVRNIAGVLIDIGRGKRPPSWAREVLE 220          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: UPI001BBD53F5 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Sulfuritalea sp. TaxID=2480090 RepID=UPI001BBD53F5)

HSP 1 Score: 264 bits (675), Expect = 5.280e-86
Identity = 131/219 (59.82%), Postives = 159/219 (72.60%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            MR+ALGLEYDG GF GWQ Q  G TVQ A+ERAL+ IA  PV T CAGRTDAGVHA AQVVHFD AAERP  AWV G NA LP  ++++WA  V  EFHARF A AR+YRY++ NR  RPGLL GKV   H  LD  AM AAA+ L+GERDFS+FR++ CQA+  V+ +  + + R G+ ++L   ANAFL HMVRN+VG L+ VG GR  P W+A++L
Sbjct:    1 MRVALGLEYDGAGFFGWQSQPGGNTVQDALERALAVIAGAPVATVCAGRTDAGVHATAQVVHFDVAAERPMSAWVRGVNAHLPASVAVRWAMPVASEFHARFAARARSYRYLLLNRRERPGLLNGKVGWCHRPLDVEAMQAAAQSLIGERDFSAFRSSECQAKSPVKILHRLDIARQGDLIVLDCCANAFLHHMVRNLVGALVYVGTGRESPAWLARLL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A7C5XSG8_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XSG8_9GAMM)

HSP 1 Score: 263 bits (673), Expect = 1.210e-85
Identity = 134/220 (60.91%), Postives = 162/220 (73.64%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIH-TLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            MRIA+G+EYDG+GFAGWQRQ + R+VQA VE AL+++A  PV T+CAGRTDAGVHAC QVVHFD  A RP+RAWVLGTNA LP D++++WAR V+  F ARF+A AR YRY+I     RP LL  +    H   LD   M  AAR LLGE DFS+FRAAGCQARHAVR V  + V R G+ V L I ANAFL HMVR +VG+LL VG+G R  +W+ ++L
Sbjct:    1 MRIAIGIEYDGSGFAGWQRQAHARSVQACVEAALARVAGHPVATRCAGRTDAGVHACGQVVHFDTEAVRPDRAWVLGTNAHLPGDVAVRWARAVEEGFDARFSATARVYRYLIAEGPARPALLRHRAAWHHGPRLDEARMAEAARALLGEHDFSAFRAAGCQARHAVRAVSRLEVGRAGDVVWLEIEANAFLHHMVRIVVGSLLLVGRGERPVEWIGELL 220          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: UPI0004113801 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Aestuariibacter salexigens TaxID=226010 RepID=UPI0004113801)

HSP 1 Score: 263 bits (672), Expect = 1.370e-85
Identity = 130/219 (59.36%), Postives = 160/219 (73.06%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            MRIALG+EYDG  F GWQRQ    ++Q  +E ALSK+AN P+  QCAGRTDAGVHA  QVVHFDC  ERPERAW LG NA LP  I+I+WAR VD EFHARF+A AR YRY+I N   R G+LT  VTH+H  LDA  M  AA+ LLGE+DF+SFRAA CQ++   R V +++V R  ++V++ I ANAFL HMVRNI G+L+ +G G R   W+A++L
Sbjct:    1 MRIALGVEYDGAAFYGWQRQREVSSIQQHIESALSKVANTPIEVQCAGRTDAGVHATYQVVHFDCPVERPERAWTLGMNANLPDSIAIKWARQVDDEFHARFSATARRYRYLIYNNKMRSGILTRGVTHVHRHLDADKMHRAAQCLLGEQDFTSFRAALCQSKTPFRNVMAVSVFRQAQYVVIDIQANAFLHHMVRNITGSLIEIGCGHRPESWLAELL 219          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A1R3W4Z9_9GAMM (tRNA pseudouridine synthase A n=2 Tax=Ectothiorhodosinus mongolicus TaxID=233100 RepID=A0A1R3W4Z9_9GAMM)

HSP 1 Score: 263 bits (673), Expect = 1.380e-85
Identity = 132/222 (59.46%), Postives = 164/222 (73.87%), Query Frame = 1
Query:    1 DVAMRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            DV  R A+GLEYDG+GF GWQ+Q   RT+Q  VE ALS++A+ P+   CAGRTDAGVHA AQV+HFD  A R  RAW+LGTN+ L  ++S+QW R +  +FHARF+A  RAYRY+I NR TRP +L  +VT IH  LDA AM  AA+ LLGE DF+SFRA GCQARH  REVQ+++V R GE + L I ANAFL HMVRNI G+L+ VG+G +   W++QVL
Sbjct:    3 DVVQRYAIGLEYDGSGFRGWQKQREARTLQPLVEEALSRVADEPIEVVCAGRTDAGVHAMAQVIHFDTRAVRDPRAWLLGTNSHLGSELSVQWVRPMPADFHARFSARWRAYRYLILNRLTRPAVLRRRVTWIHRPLDAEAMHLAAQCLLGEHDFTSFRALGCQARHPRREVQAVSVYRRGESIYLDIRANAFLHHMVRNIAGSLMCVGRGEQPAHWLSQVL 224          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A7Y1TFB9_9GAMM (tRNA pseudouridine synthase A n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1TFB9_9GAMM)

HSP 1 Score: 262 bits (670), Expect = 2.840e-85
Identity = 131/220 (59.55%), Postives = 162/220 (73.64%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVLE 669
            MRIALG+EYDGTG+ GWQRQ  G  VQ  +E ALS IAN  V   CAGRTD GVHA  QVVHFD ++ER  R W+LG N++LP DIS+ W + VD +FHARF+A AR+YRY I NR  R  L   +   ++  LDA AM AAAR+LLG  DFS+FRAAGCQA  A RE+  IAV+R+G+++ LT+TANAFLQHMVRNI GTL+ +G G R+ +WV +VL+
Sbjct:    1 MRIALGIEYDGTGYNGWQRQKTGLGVQQRLEEALSLIANETVEVVCAGRTDTGVHATGQVVHFDTSSERSRRGWLLGANSSLPNDISVTWVKPVDDDFHARFSATARSYRYRIINRLERSALYRERAWWVYEPLDANAMHAAARQLLGRHDFSAFRAAGCQASTAEREISRIAVQREGDWITLTVTANAFLQHMVRNIAGTLVAIGLGERDFEWVGEVLQ 220          
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Match: A0A3M1UM16_9GAMM (tRNA pseudouridine synthase A n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3M1UM16_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 3.650e-85
Identity = 133/219 (60.73%), Postives = 156/219 (71.23%), Query Frame = 1
Query:   10 MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRTDAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHARFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGERDFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVGTLLPVGQGRREPDWVAQVL 666
            MRIALG+EYDGT F GWQ QD+ R+VQ  VE ALSK+A+ PV T CAGRTD GVHA AQVVHFD  A RPE AWV+G N  LPR +SI+WAR V  +FHAR++A AR YRY+I NR  RP LL  +V      LDA  M  A   LLGE DFS+FRAAGCQA+H VR ++ + V R GE + + +TANAFL HMVRNI GTL+ VG+G    DWV  VL
Sbjct:    1 MRIALGIEYDGTVFCGWQYQDHCRSVQQVVEAALSKVADHPVRTVCAGRTDTGVHATAQVVHFDTPAVRPEHAWVMGGNVHLPRAVSIRWARVVPEDFHARYSATARTYRYLILNRGQRPALLRRRVCWEFRPLDAERMQEAGALLLGEHDFSAFRAAGCQAKHPVRRIERLEVARHGELIRIDVTANAFLHHMVRNIAGTLMKVGRGEAPVDWVGAVL 219          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100543.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5D9J2_9GAMM4.650e-9060.27tRNA pseudouridine synthase A n=1 Tax=Gammaproteob... [more]
H1G5Z6_9GAMM6.380e-9060.09tRNA pseudouridine synthase A n=5 Tax=Ectothiorhod... [more]
A0A7C1U1H6_9GAMM1.020e-8962.56tRNA pseudouridine synthase A n=1 Tax=Thiotrichale... [more]
A0A3N1Y1Z6_9GAMM1.780e-8860.45tRNA pseudouridine synthase A n=1 Tax=Inmirania th... [more]
UPI001BBD53F55.280e-8659.82tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Su... [more]
A0A7C5XSG8_9GAMM1.210e-8560.91tRNA pseudouridine synthase A n=1 Tax=Chromatiales... [more]
UPI00041138011.370e-8559.36tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Ae... [more]
A0A1R3W4Z9_9GAMM1.380e-8559.46tRNA pseudouridine synthase A n=2 Tax=Ectothiorhod... [more]
A0A7Y1TFB9_9GAMM2.840e-8559.55tRNA pseudouridine synthase A n=1 Tax=Woeseiaceae ... [more]
A0A3M1UM16_9GAMM3.650e-8560.73tRNA pseudouridine synthase A n=2 Tax=Gammaproteob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100543contigM-pyrifera_M_contig100543:9..677 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score271.6
Seed ortholog evalue3.3e-70
Seed eggNOG ortholog519989.ECTPHS_11125
Preferred nametruA
KEGG koko:K06173
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
EggNOG OGs1MUYI@1224,1RMK2@1236,1WX2M@135613,COG0101@1,COG0101@2
EC5.4.99.12
COG Functional cat.J
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons1
Model size669
Cds size660
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815502.171328-UTR-M-pyrifera_M_contig100543:8..171622815502.171328-UTR-M-pyrifera_M_contig100543:8..17Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig100543 9..17 +
1692277440.3899145-UTR-M-pyrifera_M_contig100543:8..171692277440.3899145-UTR-M-pyrifera_M_contig100543:8..17Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig100543 9..17 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815502.1899574-CDS-M-pyrifera_M_contig100543:17..6771622815502.1899574-CDS-M-pyrifera_M_contig100543:17..677Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100543 18..677 +
1692277440.4032059-CDS-M-pyrifera_M_contig100543:17..6771692277440.4032059-CDS-M-pyrifera_M_contig100543:17..677Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100543 18..677 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100543.122.1prot_M-pyrifera_M_contig100543.122.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100543 18..677 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100543.122.1

>prot_M-pyrifera_M_contig100543.122.1 ID=prot_M-pyrifera_M_contig100543.122.1|Name=mRNA_M-pyrifera_M_contig100543.122.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MRIALGLEYDGTGFAGWQRQDNGRTVQAAVERALSKIANCPVFTQCAGRT
DAGVHACAQVVHFDCAAERPERAWVLGTNAALPRDISIQWARTVDHEFHA
RFTAEARAYRYVICNRATRPGLLTGKVTHIHTLLDAVAMDAAARRLLGER
DFSSFRAAGCQARHAVREVQSIAVRRDGEFVILTITANAFLQHMVRNIVG
TLLPVGQGRREPDWVAQVLE
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mRNA from alignment at M-pyrifera_M_contig100543:9..677+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100543.122.1 ID=mRNA_M-pyrifera_M_contig100543.122.1|Name=mRNA_M-pyrifera_M_contig100543.122.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=669bp|location=Sequence derived from alignment at M-pyrifera_M_contig100543:9..677+ (Macrocystis pyrifera P11B4 male)
GATGTTGCGATGAGAATCGCGCTCGGACTCGAGTACGACGGTACGGGTTT CGCAGGTTGGCAGCGGCAGGATAACGGACGCACGGTACAAGCGGCGGTTG AACGGGCGCTGTCGAAAATCGCCAACTGCCCGGTGTTTACGCAATGCGCC GGGCGCACGGATGCCGGGGTGCATGCGTGCGCCCAGGTCGTCCATTTTGA CTGCGCTGCCGAACGTCCCGAACGGGCCTGGGTGCTCGGCACGAACGCCG CATTACCGCGCGATATCAGCATTCAGTGGGCGCGGACTGTTGACCACGAG TTTCATGCGCGATTCACTGCCGAAGCGCGTGCCTATCGATATGTGATCTG CAACCGCGCGACCCGGCCCGGGCTGTTAACTGGCAAGGTTACGCATATTC ACACTCTGCTCGATGCCGTCGCGATGGATGCAGCGGCGCGTCGTCTTTTG GGTGAACGGGATTTTTCGTCGTTTCGCGCAGCGGGCTGTCAGGCACGTCA CGCAGTGCGGGAAGTTCAGTCTATTGCGGTGCGGCGCGACGGCGAGTTTG TCATTTTGACGATTACCGCGAACGCGTTTTTGCAGCACATGGTGCGTAAT ATCGTCGGTACGCTACTGCCGGTAGGGCAGGGCAGGCGCGAACCGGACTG GGTTGCGCAGGTCCTCGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100543:9..677+

>mRNA_M-pyrifera_M_contig100543.122.1 ID=mRNA_M-pyrifera_M_contig100543.122.1|Name=mRNA_M-pyrifera_M_contig100543.122.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig100543:9..677+ (Macrocystis pyrifera P11B4 male)
ATGAGAATCGCGCTCGGACTCGAGTACGACGGTACGGGTTTCGCAGGTTG
GCAGCGGCAGGATAACGGACGCACGGTACAAGCGGCGGTTGAACGGGCGC
TGTCGAAAATCGCCAACTGCCCGGTGTTTACGCAATGCGCCGGGCGCACG
GATGCCGGGGTGCATGCGTGCGCCCAGGTCGTCCATTTTGACTGCGCTGC
CGAACGTCCCGAACGGGCCTGGGTGCTCGGCACGAACGCCGCATTACCGC
GCGATATCAGCATTCAGTGGGCGCGGACTGTTGACCACGAGTTTCATGCG
CGATTCACTGCCGAAGCGCGTGCCTATCGATATGTGATCTGCAACCGCGC
GACCCGGCCCGGGCTGTTAACTGGCAAGGTTACGCATATTCACACTCTGC
TCGATGCCGTCGCGATGGATGCAGCGGCGCGTCGTCTTTTGGGTGAACGG
GATTTTTCGTCGTTTCGCGCAGCGGGCTGTCAGGCACGTCACGCAGTGCG
GGAAGTTCAGTCTATTGCGGTGCGGCGCGACGGCGAGTTTGTCATTTTGA
CGATTACCGCGAACGCGTTTTTGCAGCACATGGTGCGTAATATCGTCGGT
ACGCTACTGCCGGTAGGGCAGGGCAGGCGCGAACCGGACTGGGTTGCGCA
GGTCCTCGAAATGAGAATCGCGCTCGGACTCGAGTACGACGGTACGGGTT
TCGCAGGTTGGCAGCGGCAGGATAACGGACGCACGGTACAAGCGGCGGTT
GAACGGGCGCTGTCGAAAATCGCCAACTGCCCGGTGTTTACGCAATGCGC
CGGGCGCACGGATGCCGGGGTGCATGCGTGCGCCCAGGTCGTCCATTTTG
ACTGCGCTGCCGAACGTCCCGAACGGGCCTGGGTGCTCGGCACGAACGCC
GCATTACCGCGCGATATCAGCATTCAGTGGGCGCGGACTGTTGACCACGA
GTTTCATGCGCGATTCACTGCCGAAGCGCGTGCCTATCGATATGTGATCT
GCAACCGCGCGACCCGGCCCGGGCTGTTAACTGGCAAGGTTACGCATATT
CACACTCTGCTCGATGCCGTCGCGATGGATGCAGCGGCGCGTCGTCTTTT
GGGTGAACGGGATTTTTCGTCGTTTCGCGCAGCGGGCTGTCAGGCACGTC
ACGCAGTGCGGGAAGTTCAGTCTATTGCGGTGCGGCGCGACGGCGAGTTT
GTCATTTTGACGATTACCGCGAACGCGTTTTTGCAGCACATGGTGCGTAA
TATCGTCGGTACGCTACTGCCGGTAGGGCAGGGCAGGCGCGAACCGGACT
GGGTTGCGCAGGTCCTCGAA
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