prot_M-pyrifera_M_contig100504.105.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100504.105.1
Unique Nameprot_M-pyrifera_M_contig100504.105.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig100504.105.1 vs. uniprot
Match: A0A7S4HU27_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HU27_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 1.810e-11
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0 
Query:    1 ETKRSAERGEIVLQKQMMIRGLDLNLVHPNRYFVNMGHLVRMTKD-GAPENRTFFLFNDMLLATKPDPHSKLFNYDGYVLIRGA 83
            E KR +E    V   Q  IRG+ +N+VHP R  +  G L R+  + GA E R F+L +DM+L+T P    KL  YDGY+LIRGA
Sbjct:  135 ERKRESENMGKVATIQQTIRGIGMNIVHPQRRLLKRGQLTRVNAETGAHETRYFYLLSDMMLSTIPT-EDKLRIYDGYILIRGA 217
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100504.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4HU27_9EUKA1.810e-1146.43Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 33..130
e-value: 1.7E-5
score: 34.2
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 36..127
e-value: 4.3E-6
score: 27.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 32..128
score: 9.42
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 10..131
e-value: 2.3E-20
score: 74.8
NoneNo IPR availablePANTHERPTHR12673FACIOGENITAL DYSPLASIA PROTEINcoord: 3..129
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 11..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100504contigM-pyrifera_M_contig100504:9..404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100504.105.1mRNA_M-pyrifera_M_contig100504.105.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100504 9..404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100504.105.1 ID=prot_M-pyrifera_M_contig100504.105.1|Name=mRNA_M-pyrifera_M_contig100504.105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
ETKRSAERGEIVLQKQMMIRGLDLNLVHPNRYFVNMGHLVRMTKDGAPEN
RTFFLFNDMLLATKPDPHSKLFNYDGYVLIRGAVVHTFPDKKKTIVIEFP
RINRKITYKADSQETKEKWVTWLKEALTDIDG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf