mRNA_M-pyrifera_M_contig103640.779.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Match: UPI001593D013 (toll/interleukin-1 receptor domain-containing protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593D013) HSP 1 Score: 352 bits (903), Expect = 7.420e-118 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1 Query: 1 LAHYNESLKLVQAIDKGSVDAAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWLKSLSKMQH 543 LAHYNESLKLVQAIDKGS DAAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWLKSLSKMQH Sbjct: 332 LAHYNESLKLVQAIDKGSADAAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWLKSLSKMQH 512
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Match: A0A0F9I7B9_9ZZZZ (Tyr recombinase domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9I7B9_9ZZZZ) HSP 1 Score: 273 bits (699), Expect = 7.790e-88 Identity = 137/179 (76.54%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 1 LAHYNESLKLVQAIDKGSVDAAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWLKSLSKM 537 LAHY +SL+L Q D GS +A+K LQE SY+NANLCSSYLLQG +V+RAKMHC+KAL QAE+LTK+RPESHTARLDLAIRYAWLAD DIAL N+E+GL ML +HI+IIDEIVA EPANRHWQEQQMRSYAGYAMRLAEHEE SG+YV+LA TLAE LEAHDPTNEEWS+WL+ K+ Sbjct: 23 LAHYRQSLELAQRTDHGSANASKWLQELSYTNANLCSSYLLQGSNVRRAKMHCRKALIQAERLTKIRPESHTARLDLAIRYAWLADTDIALGNIEDGLNMLKTHIKIIDEIVALEPANRHWQEQQMRSYAGYAMRLAEHEEREISGKYVKLAMTLAEALEAHDPTNEEWSRWLEVEEKL 201
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Match: UPI001BA5CC37 (Uncharacterized protein n=1 Tax=Leptolyngbya sp. 15MV TaxID=2819933 RepID=UPI001BA5CC37) HSP 1 Score: 87.0 bits (214), Expect = 4.940e-17 Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 1 LAHYNESLKLVQAIDKGSVDAAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWLKSLS 531 LA + E+ L+ I + LQ+S+Y + NL SS+L G + RA+ A+ + + L L P+ R D A + WLAD + L EG + A + ++ ++A+EP NR W+EQ+M+ L + + A T+AE L HDP N EW ++ + LS Sbjct: 164 LARHGEARALLDRIAPWGRTRPEWLQQSAYVHGNLASSHLATGGEPARAERDFAAAVAENDTLLALTPDDSMVRYDQAFQLQWLADVNYRLGKRTEGDRNAARSLALVAGLIAAEPENRVWREQEMQILIRQVELLEREGRGGEAAPFRRRAATVAERLVRHDPANAEWKRYAERLS 340
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Match: UPI001FBB75AC (toll/interleukin-1 receptor domain-containing protein n=1 Tax=Novosphingobium sp. 2638 TaxID=2930389 RepID=UPI001FBB75AC) HSP 1 Score: 61.2 bits (147), Expect = 9.650e-8 Identity = 40/148 (27.03%), Postives = 63/148 (42.57%), Query Frame = 1 Query: 94 NANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWLKSLSKM 537 N N+C+ + +G C++A+ L PE+ A DL WLADA A + + +VA +P N W+EQQM + +A L E + ++ A LA++L DP N WS + + +M Sbjct: 365 NGNICAVEVRRGLPGADTLADCERAVTLTRDLATELPENGGAAYDLVFHLIWLADAQSANGQADASYATRMQSLAASSALVARDPRNMLWREQQMEVFVRHAAWLGEVGHLKEEQAFLVRAGQLADDLVRRDPANATWSGYRDRIRRM 512
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Match: UPI0014123CE7 (toll/interleukin-1 receptor domain-containing protein n=1 Tax=Caulobacter sp. SLTY TaxID=2683262 RepID=UPI0014123CE7) HSP 1 Score: 59.7 bits (143), Expect = 3.280e-7 Identity = 40/153 (26.14%), Postives = 71/153 (46.41%), Query Frame = 1 Query: 61 AAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPANRHWQEQQMRSYAGYAMRLAEHEEMVASGEYVELATTLAEELEAHDPTNEEWSKWL 519 AA+ ++E +Y++ NLC+ L Q R+ RA CQ A+ ++PE +LDLA R+AWLA+ +A + +I+ ++ P + ++ + G + + + A+ +Y+ A L A DP+N W L Sbjct: 350 AARSMRELAYADGNLCTLALQQEREFVRANRLCQAAITGIRAALAIQPEDRGLKLDLATRWAWLAETQVAEGDFHAAGDSRLEQKKILAALIGRTPEDATLRDNWGVCHRGLSFIAYQQGNLGAARKYLLEARVTFRSLAALDPSNTRWRDQL 502
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Match: A0A437LYZ5_9SPHN (Toll/interleukin-1 receptor domain-containing protein n=2 Tax=Sphingomonas crocodyli TaxID=1979270 RepID=A0A437LYZ5_9SPHN) HSP 1 Score: 59.3 bits (142), Expect = 4.490e-7 Identity = 35/116 (30.17%), Postives = 55/116 (47.41%), Query Frame = 1 Query: 7 HYNESLKLVQAIDKGSVDAAKLLQESSYSNANLCSSYLLQGRDVQRAKMHCQKALDQAEQLTKLRPESHTARLDLAIRYAWLADADIALDNVEEGLKMLASHIRIIDEIVASEPAN 354 H+ + L+L + + +E Y+ NLCS L++ D C+ AL+ + P +LDLA RYAWLADA A ++ L I+D++VA++P N Sbjct: 357 HFEQYLQLALQLTTIDPNNVAYQREVGYAEGNLCSLNLVRSADATATLRSCRAALETMRDVAAASPRDLGVQLDLANRYAWLADALKAGGRDDQALDQRRRQAAILDKLVAADPKN 472 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103640.779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103640.779.1 >prot_M-pyrifera_M_contig103640.779.1 ID=prot_M-pyrifera_M_contig103640.779.1|Name=mRNA_M-pyrifera_M_contig103640.779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp LAHYNESLKLVQAIDKGSVDAAKLLQESSYSNANLCSSYLLQGRDVQRAKback to top mRNA from alignment at M-pyrifera_M_contig103640:105..650- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103640.779.1 ID=mRNA_M-pyrifera_M_contig103640.779.1|Name=mRNA_M-pyrifera_M_contig103640.779.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig103640:105..650- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103640:105..650- >mRNA_M-pyrifera_M_contig103640.779.1 ID=mRNA_M-pyrifera_M_contig103640.779.1|Name=mRNA_M-pyrifera_M_contig103640.779.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig103640:105..650- (Macrocystis pyrifera P11B4 male)back to top |