mRNA_M-pyrifera_M_contig103619.772.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A7S4PDB0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PDB0_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 2.850e-14 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 46 LWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDANGAFYIRIIYNGEVLSGDFP-TGTCDTATGLCPYDDF-RSFAEARFPVD 300 L+SGHD+SV P+L+ LG++ G W P A+Q+V+E+WE NG YI +IYNG L+ P G D LC +DDF S E R +D Sbjct: 335 LFSGHDSSVWPLLDTLGIYDGHWPPLASQVVYEMWEAKNGTNYIEVIYNGRDLTQYIPHCGGGD----LCLWDDFLHSTREIRVGLD 417
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A0G4H6F4_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H6F4_VITBC) HSP 1 Score: 76.3 bits (186), Expect = 6.010e-14 Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 40 LTLWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWE---DANGAFYIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRSFAEARFPVDGA-CGPVE 321 + LWSGHDT+++P+L A+G W G W YA+ ++ E++ D+ A Y R+IYNGEV++ CD LC YD F A F DG C P E Sbjct: 431 IALWSGHDTTLMPVLAAMGAWDGKWPSYASIIILELYTVGADSREA-YFRLIYNGEVITSMIKG--CDPQQDLCSYDHFD--AVTSFAKDGPDCDPTE 523
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A087SS54_AUXPR (Lysophosphatidic acid phosphatase type 6 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SS54_AUXPR) HSP 1 Score: 73.9 bits (180), Expect = 3.610e-13 Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 1 Query: 1 RMDNVVTSNATDTLTLWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDANGAFYIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRSFAEARFPVDGA 306 RM+ V A + L+SGHD++++P+L ALG W Y + LVFE W +G Y++++YNGE L GT + CP DFR A +D A Sbjct: 320 RMEETVAGTARHRMLLYSGHDSTLMPLLVALGKEVETWPAYMSNLVFENWRRGDGQRYVKVLYNGEALGLQELCGTPE-----CPLQDFRRAVIAPLQLDSA 416
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: H3AKM0_LATCH (Uncharacterized protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AKM0_LATCH) HSP 1 Score: 72.0 bits (175), Expect = 1.750e-12 Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 1 RMDNVVTSNATDTLTLWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDA-NGAFYIRIIYNGEVLSGDFPTGTC-----DTATGLCPYDDFRSFAE 282 RM +V+ + L+S HD +V P+LNALGL + +AA+L+FE+W+ N ++IRI+YNG+ ++ F T C + LCP+++F SF + Sbjct: 361 RMHHVLRGKKEEVFALYSAHDVTVSPVLNALGLLEARFPRFAARLIFELWQGPKNKNYFIRILYNGDDVT--FQTSFCRKHNRHSKWPLCPFENFASFVQ 458
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A1Y1XT32_9FUNG (Phosphoglycerate mutase-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XT32_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 3.180e-12 Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 46 LWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDAN-GAFYIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRSFAEARFPVD 300 ++SGHDT+V P+L L W PYA+ L+FE+W+D + GA ++R++YNG+VL CD LCP + F S + P+D Sbjct: 352 IFSGHDTTVQPILGVLRADDFRWPPYASSLIFELWQDKHTGAAFLRVLYNGDVLRSP----VCDF--NLCPLETFLSQIDHYIPLD 431
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A7R9V1D7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V1D7_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 1.330e-11 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 46 LWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDANGAFYIRIIYN 192 L+SGHD++V+P+L ALGL W PY + LVFE+WEDA+G +R++YN Sbjct: 36 LYSGHDSTVMPLLLALGLDLTHWPPYLSNLVFELWEDASGQHVVRVMYN 84
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A1Y2GLM2_9FUNG (Histidine phosphatase superfamily n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GLM2_9FUNG) HSP 1 Score: 69.3 bits (168), Expect = 1.540e-11 Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 40 LTLWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDANGAFYIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRSFAE 282 L+ +SGHDT++ P+L W PYA+ ++ E+W+ + G ++R++YNGEVL D + CD CP+D F + + Sbjct: 374 LSFYSGHDTTIQPLLGMFDAEDQQWPPYASNIILELWKSSPGEHFVRVLYNGEVL--DVKSNWCDLE--WCPFDTFIKYLD 450
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A1S3J9P8_LINUN (2-phosphoxylose phosphatase 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J9P8_LINUN) HSP 1 Score: 67.8 bits (164), Expect = 5.450e-11 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 46 LWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWED-ANGAFYIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRSFAE 282 L+SGHDT++ P+L ALGL G W P+A++L FE++ AN Y+R++Y G+ ++ G+CP +F FA+ Sbjct: 406 LFSGHDTTISPLLTALGLHDGIWPPFASRLTFELYRSVANERLYMRVVYLGKDVTRKLRFCGGSLIDGMCPLKNFLKFAK 485
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A8J5X3I0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3I0_DIALT) HSP 1 Score: 67.4 bits (163), Expect = 7.490e-11 Identity = 39/115 (33.91%), Postives = 55/115 (47.83%), Query Frame = 1 Query: 46 LWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWED-------ANGAF------------YIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRS-FAEARFPVD---GACGPVE 321 LWS HDT+V+P++ ALG+ G WAPYAA VFE+W A+GA +R++Y G ++ P C A LC Y+ + A P+D C P + Sbjct: 339 LWSAHDTTVMPLMAALGVHDGRWAPYAAHFVFEVWRQSGAPPARAHGATPAPGVAPATKGARVRLLYMGRAITARLPG--CADAGALCAYEQLEAALAPWSLPLDEWLAKCEPTQ 451
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Match: A0A1X7TVT7_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TVT7_AMPQE) HSP 1 Score: 67.0 bits (162), Expect = 9.760e-11 Identity = 29/85 (34.12%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 46 LWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEDANGAFYIRIIYNGEVLSGDFPTGTCDTATGLCPYDDFRSFAEARFPVD 300 L+SGHDT++I +L ALG+ G W PY++ ++FE++ + +R++YNG++ + F G LC Y+ F ++ P D Sbjct: 335 LYSGHDTTLIQLLVALGIDEGIWPPYSSMMLFELYSTSTAPAAVRVLYNGKIKTLPFCNGQ-----ELCSYETFSNYLSTVTPPD 414 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103619.772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103619.772.1 >prot_M-pyrifera_M_contig103619.772.1 ID=prot_M-pyrifera_M_contig103619.772.1|Name=mRNA_M-pyrifera_M_contig103619.772.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp MDNVVTSNATDTLTLWSGHDTSVIPMLNALGLWRGAWAPYAAQLVFEIWEback to top mRNA from alignment at M-pyrifera_M_contig103619:331..651- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103619.772.1 ID=mRNA_M-pyrifera_M_contig103619.772.1|Name=mRNA_M-pyrifera_M_contig103619.772.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig103619:331..651- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103619:331..651- >mRNA_M-pyrifera_M_contig103619.772.1 ID=mRNA_M-pyrifera_M_contig103619.772.1|Name=mRNA_M-pyrifera_M_contig103619.772.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig103619:331..651- (Macrocystis pyrifera P11B4 male)back to top |