mRNA_M-pyrifera_M_contig103424.731.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: W7TBU8_9STRA (Stress-induced protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBU8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.400e-16 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 31 EELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSAAEAMEDWGL 297 E K NA F +G Y AL +YT+G+ + PD HVLYSNR+ FL KE + KAL DAE + + P WP+ Y R +A A+ + + Sbjct: 46 ERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFL---KESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRYAI 131
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A4D9CT36_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT36_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.490e-15 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 31 EELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSAAEAMEDWGL 297 E K NA F +G Y AL +YT+G+ + PD HVLYSNR+ FL KE + KAL DAE + + P WP+ Y R +A A+ + L Sbjct: 46 ERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFL---KESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRYAL 131
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A3S5AXP7_9PLAT (Stress-induced-phosphoprotein 1 n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5AXP7_9PLAT) HSP 1 Score: 75.1 bits (183), Expect = 1.100e-13 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 37 LKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSAAEAMEDW 291 LK N +G+Y SA+ Y++GI P+ HVLYSNR++ + K GD +KALSDA+E VRL +W +G+ R SA EA+ + Sbjct: 5 LKDKGNLALKEGDYKSAVGFYSQGINADPENHVLYSNRSVAYF---KSGDYSKALSDADECVRLNVNWSKGHSRRASALEALSRY 86
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A388KX01_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KX01_CHABU) HSP 1 Score: 70.1 bits (170), Expect = 4.750e-12 Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 37 LKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSAAEAMEDW 291 LK NALF G + A +YT+ I P+ H LYSNR+ FL+ K +AL DAE+ +RLAP+W +GY R A EAM+ + Sbjct: 38 LKEQGNALFKAGSFLRAAVVYTQAIKEDPNNHTLYSNRSAAFLQLSK---VTQALKDAEQTIRLAPTWEKGYFRKGCALEAMKKF 119
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A8C8R7W6_9SAUR (RING-type E3 ubiquitin transferase n=2 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8R7W6_9SAUR) HSP 1 Score: 70.5 bits (171), Expect = 4.970e-12 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 16 CLLGMEELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSAAEAME--DWGL 297 C+ E +K N FS+ +D A++ Y+K I P+ H+LYSNRAL FLR G+ +AL D + A L P+WP+G+ C A M +W L Sbjct: 229 CIKKSEFMKDRGNCEFSQKNFDFAINSYSKAIEFCPENHLLYSNRALCFLRTGQY---ERALVDGKRATILKPNWPKGHHHFCEALSLMGKLEWAL 321
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A2S5BHQ6_9BASI (Thioredoxin n=1 Tax=Rhodotorula taiwanensis TaxID=741276 RepID=A0A2S5BHQ6_9BASI) HSP 1 Score: 69.7 bits (169), Expect = 5.200e-12 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 31 EELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLR 258 E LK N F GE++SA D Y++ I L P++ VL NRA LR D AL+DA+EAVR+AP+W +G++R Sbjct: 183 EALKEEGNTFFKGGEFESARDKYSEAISLAPESFVLLGNRAFAILRSASP-DFEAALADADEAVRIAPTWAKGHVR 257
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A6P7JPA1_9TELE (RING-type E3 ubiquitin transferase n=3 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7JPA1_9TELE) HSP 1 Score: 69.7 bits (169), Expect = 9.230e-12 Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 10 SWCLLGMEELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSA 270 S+ + EE+K N F K +Y+ A+ Y+K I YPD H++YSNRAL ++R K KA+ D + AV + P W +G+ R C A Sbjct: 201 SYSIEKCEEMKKKGNENFQKQQYEDAVIFYSKAITFYPDNHIIYSNRALCYIRCKKY---LKAVCDGKRAVLIKPHWAKGHYRYCEA 284
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A7S1M609_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1M609_ALECA) HSP 1 Score: 68.9 bits (167), Expect = 1.590e-11 Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 37 LKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRG-KEGDAA--------KALSDAEEAVRLAPSWPRGYLRACSAAEAMEDW 291 LK NA F G+YD+A+D YT+ + L H+ +SNR+ +L+ G K G A KAL+DA + V ++P+W +GY R S + ++ W Sbjct: 46 LKNDGNAAFKAGDYDNAIDAYTRALELDQTQHLCFSNRSAAYLKLGCKAGTAEASKSDFLDKALADANKCVEISPNWAKGYSRQASVLQELKRW 139
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: A0A7S0ENX4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ENX4_9CRYP) HSP 1 Score: 67.8 bits (164), Expect = 3.110e-11 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 31 EELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSA 270 E+ K N F KGE+D AL+ Y++ + + HV+ SNR+ F + G+ KAL DAEEA+RLAPSWP+GY R +A Sbjct: 7 EDDKTKGNEAFKKGEFDRALEHYSRALET-AENHVIRSNRSACFSQLGQH---EKALVDAEEAIRLAPSWPKGYSRKAAA 82
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Match: UPI0010A8E086 (E3 ubiquitin-protein ligase TTC3 isoform X1 n=3 Tax=Monotremata TaxID=9255 RepID=UPI0010A8E086) HSP 1 Score: 68.2 bits (165), Expect = 3.220e-11 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 16 CLLGMEELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKEGDAAKALSDAEEAVRLAPSWPRGYLRACSAAEAMED 288 C E +K N FS+ +YD A+ YT+ I P+ H+LYSNRAL FLR G+ +AL+D + A L +WP+G+ R C A M + Sbjct: 200 CTRKGEMMKERGNEEFSQKKYDLAILFYTRAINFCPENHLLYSNRALCFLRIGQY---KRALADGKRATILKHNWPKGHYRFCDALSMMGE 287 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103424.731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103424.731.1 >prot_M-pyrifera_M_contig103424.731.1 ID=prot_M-pyrifera_M_contig103424.731.1|Name=mRNA_M-pyrifera_M_contig103424.731.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp MEELKGAANALFSKGEYDSALDMYTKGIGLYPDAHVLYSNRALVFLRRGKback to top mRNA from alignment at M-pyrifera_M_contig103424:16..312+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103424.731.1 ID=mRNA_M-pyrifera_M_contig103424.731.1|Name=mRNA_M-pyrifera_M_contig103424.731.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig103424:16..312+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103424:16..312+ >mRNA_M-pyrifera_M_contig103424.731.1 ID=mRNA_M-pyrifera_M_contig103424.731.1|Name=mRNA_M-pyrifera_M_contig103424.731.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig103424:16..312+ (Macrocystis pyrifera P11B4 male)back to top |