mRNA_M-pyrifera_M_contig100296.69.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A7S0RM90_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RM90_9CHLO) HSP 1 Score: 128 bits (321), Expect = 8.250e-33 Identity = 67/108 (62.04%), Postives = 80/108 (74.07%), Query Frame = 1 Query: 13 IVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 IVIKVGTSSL+ + + + L +A + ETV TL GHHVIIVSSGAVG GC +LGL +KP ++A QALAA+GQ HLMR Y D AA+ LRCAQVLLT NLANR + Sbjct: 45 IVIKVGTSSLVRAEQQTLNLGIIARLCETVKTLRSQGHHVIIVSSGAVGVGCQRLGLATKPGELAKKQALAAVGQLHLMRYYEDFMAALNLRCAQVLLTLDNLANRAQ 152
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A250WWP4_9CHLO (AA_kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWP4_9CHLO) HSP 1 Score: 122 bits (307), Expect = 1.360e-32 Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 1 VMRQIVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 V + IVIKVGTSSL++ + +R+ + LA ++ETV L GHHV+IV+SGAVG GC +L L SKP +A QALAA+GQ HLM+ Y D A+GL CAQVL+T NLA+R + Sbjct: 11 VPQVIVIKVGTSSLVNPEKQRLNISNLARIIETVKALRNMGHHVVIVTSGAVGVGCHRLRLASKPTQLAKKQALAAVGQVHLMKFYEDFLNAVGLTCAQVLVTLDNLADRGQ 122
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A150GMC3_GONPE (PUA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GMC3_GONPE) HSP 1 Score: 126 bits (316), Expect = 4.020e-32 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 16 VIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 VIKVGTSSL+ + + + L LA + ETV L GHHVIIV+SGAVG GC +LGL +KP +A QALAA+GQ HLM+ Y D FAA+GL CAQVLLT NLANR + Sbjct: 31 VIKVGTSSLVRPEQQTLNLTNLARICETVKLLKHEGHHVIIVTSGAVGVGCQRLGLTTKPSVLAKKQALAAVGQVHLMKFYEDFFAALGLTCAQVLLTLDNLANRSQ 137
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A0D2K4C0_9CHLO (Glutamate 5-kinase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2K4C0_9CHLO) HSP 1 Score: 119 bits (299), Expect = 4.390e-32 Identity = 62/107 (57.94%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 16 VIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 VIK+GTSSLI++ + L LA V E + LH GH VI+VSSGAVG GC +LGL +P +A QALAA+GQ HLMR Y D F A+GL CAQVLLT NLA+R + Sbjct: 7 VIKIGTSSLINEGFHSLNLSNLARVCEVIKQLHNEGHFVILVSSGAVGVGCQRLGLTVRPTKLAQKQALAAVGQVHLMRYYQDFFQALGLTCAQVLLTLENLADRSQ 113
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A7S0RLR4_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RLR4_9CHLO) HSP 1 Score: 125 bits (315), Expect = 5.120e-32 Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 13 IVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 IVIKVGTSSL+ + + + L LA + ETV +LH GHHVI+VSSGAVG GC +LGL +P A QALAA+GQ HLMR Y D+ A++ +RCAQVLLT NLANR + Sbjct: 32 IVIKVGTSSLLRPELESLNLGNLARLCETVKSLHALGHHVIVVSSGAVGVGCQRLGLAHRPSCSAKKQALAAIGQVHLMRHYEDLLASLNVRCAQVLLTLDNLANRAQ 139
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: C1MP26_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MP26_MICPC) HSP 1 Score: 124 bits (310), Expect = 5.160e-32 Identity = 61/108 (56.48%), Postives = 83/108 (76.85%), Query Frame = 1 Query: 13 IVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 +V+KVGTSSL+ D + L Q+ ++ ETV LH+ G +V+IVSSGAVG G ++G + KPK+VA QALAA+GQ HLMR Y D+F+ IGL+CAQVLLT GNL++R++ Sbjct: 2 VVVKVGTSSLLRDGV--LHLSQICAMCETVSRLHKRGLNVVIVSSGAVGAGMFKMGFDEKPKEVAKKQALAAVGQVHLMRHYEDIFSTIGLKCAQVLLTLGNLSDRKQ 107
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: D8TY74_VOLCA (PUA domain-containing protein (Fragment) n=3 Tax=Volvox TaxID=3066 RepID=D8TY74_VOLCA) HSP 1 Score: 124 bits (310), Expect = 7.880e-32 Identity = 63/107 (58.88%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 16 VIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 VIKVGTSSL+ + + + L LA + ETV L GHHVI+V+SGAVG GC +LGL +KP +A QALAA+GQ HLM+ Y D AA+GL CAQVLLT NLANR + Sbjct: 1 VIKVGTSSLVRPEQQTLNLTNLARICETVKLLKSEGHHVIVVTSGAVGVGCQRLGLTTKPSVLAKKQALAAVGQVHLMKYYEDFLAALGLTCAQVLLTLDNLANRSQ 107
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A2K3CPA9_CHLRE (PUA domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CPA9_CHLRE) HSP 1 Score: 125 bits (314), Expect = 1.010e-31 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 16 VIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 VIKVGTSSL+ + + + L LA + ET+ L + GHHV+IV+SGAVG GC +LGL +KP +A QALAA+GQ HLM+ Y D AA+GL CAQVLLT NLANR + Sbjct: 29 VIKVGTSSLVRPEQQTLNLTNLARICETIKALKKMGHHVVIVTSGAVGVGCQRLGLATKPSQLAKKQALAAVGQVHLMKFYEDFLAALGLTCAQVLLTLDNLANRSQ 135
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A2V0PI91_9CHLO (Glutamate 5-kinase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PI91_9CHLO) HSP 1 Score: 125 bits (313), Expect = 1.050e-31 Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 13 IVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 IVIK+GTSSLIH + + L LA + E + LH GH+VI+VSSGA+G GC +LGL KP +A QALAA+GQ HLMR Y D F A+GL CAQVLLT NLA+R + Sbjct: 31 IVIKIGTSSLIHSEYHSLHLANLARLCEVIKQLHVMGHYVILVSSGAIGVGCQRLGLSVKPTRIAQKQALAAVGQVHLMRYYEDFFQALGLTCAQVLLTLDNLADRSQ 138
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Match: A0A7S0SJY7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJY7_9CHLO) HSP 1 Score: 120 bits (301), Expect = 1.570e-31 Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 13 IVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAVGFGCLQLGLESKPKDVASLQALAALGQAHLMRQYSDMFAAIGLRCAQVLLTYGNLANRRE 336 +VIKVGTSSL+ + + L Q+ ++ ETV LH G V++VSSGAVG G ++GL KPK+VA QALAA+GQ HLMR Y D+F +G++CAQVLLT NL+NR++ Sbjct: 17 VVIKVGTSSLLRANAGTLHLSQICTLCETVSRLHARGIRVVLVSSGAVGAGMFRMGLTEKPKEVAKKQALAAVGQVHLMRYYEDIFNTLGVKCAQVLLTLENLSNRKQ 124 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100296.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100296.69.1 >prot_M-pyrifera_M_contig100296.69.1 ID=prot_M-pyrifera_M_contig100296.69.1|Name=mRNA_M-pyrifera_M_contig100296.69.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp MRQIVIKVGTSSLIHDDGKRIALRQLASVVETVGTLHRAGHHVIIVSSGAback to top mRNA from alignment at M-pyrifera_M_contig100296:285..629+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100296.69.1 ID=mRNA_M-pyrifera_M_contig100296.69.1|Name=mRNA_M-pyrifera_M_contig100296.69.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=345bp|location=Sequence derived from alignment at M-pyrifera_M_contig100296:285..629+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100296:285..629+ >mRNA_M-pyrifera_M_contig100296.69.1 ID=mRNA_M-pyrifera_M_contig100296.69.1|Name=mRNA_M-pyrifera_M_contig100296.69.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig100296:285..629+ (Macrocystis pyrifera P11B4 male)back to top |