prot_M-pyrifera_M_contig100287.66.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100287.66.1
Unique Nameprot_M-pyrifera_M_contig100287.66.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: UPI001CBB0724 (T9SS type A sorting domain-containing protein n=1 Tax=Aestuariivivens sp. NBU2969 TaxID=2873267 RepID=UPI001CBB0724)

HSP 1 Score: 53.9 bits (128), Expect = 4.630e-6
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    1 TVDCRDNCPSDPNKTRPGICGCGEADQDYDGDTVL 35
            T +C D CP DPNKT PG+CGCG A+ D D D VL
Sbjct:   66 TPNCLDGCPDDPNKTDPGVCGCGTAETDTDSDGVL 100          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A7S2V0L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L2_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 4.790e-6
Identity = 19/28 (67.86%), Postives = 24/28 (85.71%), Query Frame = 0
Query:    2 VDCRDNCPSDPNKTRPGICGCGEADQDY 29
            VDC D CP+DP+KT PG+CGCG +D+DY
Sbjct:   40 VDCDDQCPADPSKTEPGLCGCGMSDKDY 67          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A518LHA0_9BACT (Alpha-agarase n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A518LHA0_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 2.420e-5
Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 0
Query:    6 DNCPSDPNKTRPGICGCGEADQDYDGDTVL 35
            D CP+DPNKT PG CGCG AD D DGD VL
Sbjct:  260 DGCPNDPNKTAPGDCGCGVADDDADGDGVL 289          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A7C4JW05_9BACT (HYR domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C4JW05_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 4.980e-5
Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 0
Query:    6 DNCPSDPNKTRPGICGCGEADQDYDGDTVL 35
            DNCP D NKT PGICGCG AD D DGD +L
Sbjct:  724 DNCPFDANKTEPGICGCGVADVDTDGDGLL 753          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A521K1J9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K1J9_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 5.340e-5
Identity = 20/28 (71.43%), Postives = 21/28 (75.00%), Query Frame = 0
Query:    1 TVDCRDNCPSDPNKTRPGICGCGEADQD 28
            T DC D CP+DPNK  PGICGCG AD D
Sbjct:    7 TADCNDGCPTDPNKIAPGICGCGVADTD 34          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A1W9N1M1_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9N1M1_9DELT)

HSP 1 Score: 51.2 bits (121), Expect = 5.950e-5
Identity = 20/28 (71.43%), Postives = 21/28 (75.00%), Query Frame = 0
Query:    1 TVDCRDNCPSDPNKTRPGICGCGEADQD 28
            T DC D CP+DPNKT PGICGCG  D D
Sbjct:    6 TPDCNDKCPNDPNKTEPGICGCGVPDTD 33          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A2N6C3W8_9DELT (Uncharacterized protein n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A2N6C3W8_9DELT)

HSP 1 Score: 51.2 bits (121), Expect = 6.230e-5
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    6 DNCPSDPNKTRPGICGCGEADQDYDGDTV 34
            DNCPSDP+KT+PGICGCG +D D D D +
Sbjct:   23 DNCPSDPSKTQPGICGCGVSDADSDSDGI 51          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A3A0CNR9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0CNR9_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 6.550e-5
Identity = 22/33 (66.67%), Postives = 24/33 (72.73%), Query Frame = 0
Query:    2 VDCRDNCPSDPNKTRPGICGCGEADQDYDGDTV 34
            +D  D CPSDPNKT PG CGCG AD D +GD V
Sbjct:  643 IDDCDGCPSDPNKTSPGACGCGVADTDTEGDGV 675          
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Match: A0A419F2J2_9BACT (HYR domain-containing protein (Fragment) n=1 Tax=Candidatus Abyssubacteria bacterium SURF_17 TaxID=2093361 RepID=A0A419F2J2_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 8.550e-5
Identity = 20/31 (64.52%), Postives = 22/31 (70.97%), Query Frame = 0
Query:    2 VDCRDNCPSDPNKTRPGICGCGEADQDYDGD 32
             DC DNCP+DP KT PG+CGC  AD D D D
Sbjct:    1 ADCNDNCPTDPLKTEPGVCGCDVADTDSDAD 31          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100287.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
UPI001CBB07244.630e-662.86T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7S2V0L2_9STRA4.790e-667.86Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A518LHA0_9BACT2.420e-573.33Alpha-agarase n=3 Tax=Planctomycetes TaxID=203682 ... [more]
A0A7C4JW05_9BACT4.980e-573.33HYR domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A521K1J9_9BACT5.340e-571.43Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A1W9N1M1_9DELT5.950e-571.43Uncharacterized protein (Fragment) n=1 Tax=Desulfo... [more]
A0A2N6C3W8_9DELT6.230e-568.97Uncharacterized protein n=1 Tax=Desulfobulbaceae b... [more]
A0A3A0CNR9_9BACT6.550e-566.67Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A419F2J2_9BACT8.550e-564.52HYR domain-containing protein (Fragment) n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003367Thrombospondin, type 3-like repeatPFAMPF02412TSP_3coord: 22..46
e-value: 6.0E-4
score: 19.4
IPR028974TSP type-3 repeatSUPERFAMILY103647TSP type-3 repeatcoord: 5..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100287contigM-pyrifera_M_contig100287:307..681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100287.66.1mRNA_M-pyrifera_M_contig100287.66.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100287 307..681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100287.66.1 ID=prot_M-pyrifera_M_contig100287.66.1|Name=mRNA_M-pyrifera_M_contig100287.66.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
TVDCRDNCPSDPNKTRPGICGCGEADQDYDGDTVLDCNDNCPNDPNKINP
GACPCGTPNTDSDGDGVADCNDDCPSDPFKTTPGVCGCGAPDTDSDGDGT
PDCNDQCPDDPTKTAPGACPCGADE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003367Thrombospondin_3-like_rpt
IPR028974TSP_type-3_rpt