prot_M-pyrifera_M_contig102809.598.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102809.598.1
Unique Nameprot_M-pyrifera_M_contig102809.598.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig102809.598.1 vs. uniprot
Match: A0A151ZGN6_9MYCE (CPSF domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZGN6_9MYCE)

HSP 1 Score: 55.1 bits (131), Expect = 1.910e-7
Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0
Query:    1 GIFLAGVQPLWMFCERDYLRVFPMKTRTPICAVADFHNEIWPNSFVFTTSGS 52
            G+F+ G  PLW+FCE++YLRV  M     I     FHNE   N F++ T  S
Sbjct:  953 GLFITGKSPLWLFCEKNYLRVHCMNNEGAINIFTPFHNENCSNGFIYFTESS 1004          
BLAST of mRNA_M-pyrifera_M_contig102809.598.1 vs. uniprot
Match: L8GPK4_ACACA (CPSF A subunit region protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPK4_ACACA)

HSP 1 Score: 53.9 bits (128), Expect = 4.890e-7
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 GIFLAGVQPLWMFCERDYLRVFPMKTRTPICAVADFHNEIWPNSFVF 47
            G+F++G  P W+F +R Y R++PMK  T + A A+FHN   P+ F++
Sbjct:  980 GVFISGSAPAWVFAQRGYARLYPMKLDTFVRAFAEFHNANCPHGFIY 1026          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102809.598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A151ZGN6_9MYCE1.910e-744.23CPSF domain-containing protein n=1 Tax=Tieghemoste... [more]
L8GPK4_ACACA4.890e-742.55CPSF A subunit region protein n=1 Tax=Acanthamoeba... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102809contigM-pyrifera_M_contig102809:19..174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102809.598.1mRNA_M-pyrifera_M_contig102809.598.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102809 19..174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102809.598.1 ID=prot_M-pyrifera_M_contig102809.598.1|Name=mRNA_M-pyrifera_M_contig102809.598.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
GIFLAGVQPLWMFCERDYLRVFPMKTRTPICAVADFHNEIWPNSFVFTTS
GS
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