prot_M-pyrifera_M_contig127736.5587.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127736.5587.1
Unique Nameprot_M-pyrifera_M_contig127736.5587.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
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BLAST of mRNA_M-pyrifera_M_contig127736.5587.1 vs. uniprot
Match: A0A2E7KJV7_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KJV7_9PLAN)

HSP 1 Score: 206 bits (524), Expect = 4.120e-66
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0 
Query:    1 AYRDRDESSAAADLPLLSTQCRRHPLAMTALLLPVAGLLLVFTPLAPRGESFTYAWFAIIGFLSIVCAGLAVRDIRLTPERYSGMGIAIAGALFLPVVILATLFVLQIT 109
            AYRDRDESSAAADLPLLSTQCRRHPLAMTALLLPVAGLLL+FTPLAPRGESFTYAWFAIIGFLSIVCAGLA RDIRLTPERYSGMGIAIAGALFLPVVILATLFVLQIT
Sbjct:   77 AYRDRDESSAAADLPLLSTQCRRHPLAMTALLLPVAGLLLIFTPLAPRGESFTYAWFAIIGFLSIVCAGLAARDIRLTPERYSGMGIAIAGALFLPVVILATLFVLQIT 185
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BLAST of mRNA_M-pyrifera_M_contig127736.5587.1 vs. uniprot
Match: A0A5A8BS57_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BS57_9PLAN)

HSP 1 Score: 179 bits (455), Expect = 1.300e-55
Identity = 97/109 (88.99%), Postives = 99/109 (90.83%), Query Frame = 0 
Query:    1 AYRDRDESSAAADLPLLSTQCRRHPLAMTALLLPVAGLLLVFTPLAPRGESFTYAWFAIIGFLSIVCAGLAVRDIRLTPERYSGMGIAIAGALFLPVVILATLFVLQIT 109
            AYRDRDE +AAAD PL  TQ RRHPLAMTALLLPVAGLLLVFTPLAPRGE FTYAWFAIIGFLSIV AGLA RDIRLTPERYSG GIAI+GALFLPVVIL TLFVLQIT
Sbjct:   77 AYRDRDEMTAAADSPLKITQRRRHPLAMTALLLPVAGLLLVFTPLAPRGELFTYAWFAIIGFLSIVFAGLASRDIRLTPERYSGTGIAISGALFLPVVILVTLFVLQIT 185
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127736.5587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E7KJV7_9PLAN4.120e-6698.17Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
A0A5A8BS57_9PLAN1.300e-5588.99Uncharacterized protein n=1 Tax=Gimesia chilikensi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..72
NoneNo IPR availableTMHMMTMhelixcoord: 24..46
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127736contigM-pyrifera_M_contig127736:1..330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127736.5587.1mRNA_M-pyrifera_M_contig127736.5587.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127736 1..330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127736.5587.1 ID=prot_M-pyrifera_M_contig127736.5587.1|Name=mRNA_M-pyrifera_M_contig127736.5587.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
AYRDRDESSAAADLPLLSTQCRRHPLAMTALLLPVAGLLLVFTPLAPRGE
SFTYAWFAIIGFLSIVCAGLAVRDIRLTPERYSGMGIAIAGALFLPVVIL
ATLFVLQIT*
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