mRNA_M-pyrifera_M_contig126066.5266.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A2D8GI33_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GI33_9ACTN) HSP 1 Score: 312 bits (800), Expect = 1.550e-100 Identity = 158/170 (92.94%), Postives = 166/170 (97.65%), Query Frame = 1
Query: 1 TVNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
TVN YARD+G LKEKDDNLTGEDIREGLTAIISARIG+PQFEGQTKSKLGNVSMRSLVE+VTNE+MAEWLEEHP EGK IVTKATNAARAR+AA+DARKAIRSKSLLDGAGMPDKLKDCSAK+PERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERAR+DKM
Sbjct: 343 TVNNYARDKGLLKEKDDNLTGEDIREGLTAIISARIGEPQFEGQTKSKLGNVSMRSLVEKVTNEKMAEWLEEHPAEGKAIVTKATNAARARVAAADARKAIRSKSLLDGAGMPDKLKDCSAKEPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARVDKM 512
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A7X5WVW5_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WVW5_9ACTN) HSP 1 Score: 307 bits (787), Expect = 8.980e-99 Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 1
Query: 1 TVNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
TVNAYAR++G LKEKD+NL GEDIREGLTAI+S RIG+PQFEGQTKSKLGNVSMRSLVERVTNER+AEWLEEHPGE K +VTKATNAARAR+AA+DARKAIRSKSLLDGAGMPDKLKDCSAK+PERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM
Sbjct: 326 TVNAYAREKGTLKEKDENLQGEDIREGLTAIVSVRIGEPQFEGQTKSKLGNVSMRSLVERVTNERLAEWLEEHPGEAKALVTKATNAARARVAAADARKAIRSKSLLDGAGMPDKLKDCSAKEPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 495
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A7K1ZBL8_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBL8_9ACTN) HSP 1 Score: 305 bits (780), Expect = 9.960e-98 Identity = 154/170 (90.59%), Postives = 162/170 (95.29%), Query Frame = 1
Query: 1 TVNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
TVN YAR++G LKEKDDNLTGEDIREGLTAIISARIG+PQFEGQTKSKLGNVSMRSLVERVTNERMA+WLEEHPGE K +TKATNAARAR+AA+DARKAIRSKSLLDGAGMPDKLKDCS+KDP RELFIVEGDSAGGSAVRARDP TQAILPIRGKILNVERARIDKM
Sbjct: 326 TVNTYARNKGLLKEKDDNLTGEDIREGLTAIISARIGEPQFEGQTKSKLGNVSMRSLVERVTNERMADWLEEHPGEAKATITKATNAARARVAAADARKAIRSKSLLDGAGMPDKLKDCSSKDPAERELFIVEGDSAGGSAVRARDPRTQAILPIRGKILNVERARIDKM 495
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A3M2GUA3_ACTSX (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GUA3_ACTSX) HSP 1 Score: 300 bits (769), Expect = 3.520e-96 Identity = 151/170 (88.82%), Postives = 164/170 (96.47%), Query Frame = 1
Query: 1 TVNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
TVNAYARD+G LKE+DDNLTG+DIREGLTAIISAR+ +PQFEGQTKSKLGNVSMRSLVE+VTNER+AEWLEEHPGE + IVTKA NAARAR+AA+DARKAIR+KSLLDGAGMPDKLKDCSA++PERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERAR DKM
Sbjct: 318 TVNAYARDKGLLKERDDNLTGDDIREGLTAIISARLAEPQFEGQTKSKLGNVSMRSLVEKVTNERLAEWLEEHPGEARKIVTKALNAARARVAAADARKAIRAKSLLDGAGMPDKLKDCSAREPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARPDKM 487
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A351IV20_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=5 Tax=root TaxID=1 RepID=A0A351IV20_9ACTN) HSP 1 Score: 263 bits (671), Expect = 9.180e-82 Identity = 132/169 (78.11%), Postives = 144/169 (85.21%), Query Frame = 1
Query: 4 VNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
VN YAR RG LKE DDNL GEDIREGLTAIIS R+ DPQFEGQTKSKLGNV RSLV+R TNE++AEWLEEHP EGK I+ KA NA RAR+AA DARK+ R KS LDGAGMPDKLKDC+++DP ELFIVEGDSAGGSAV+ARDP T AILPIRGKILNVERAR D+M
Sbjct: 302 VNRYARKRGLLKENDDNLQGEDIREGLTAIISVRLEDPQFEGQTKSKLGNVETRSLVQRTTNEKLAEWLEEHPSEGKRILQKAVNAQRARVAAQDARKSARRKSALDGAGMPDKLKDCASRDPRESELFIVEGDSAGGSAVQARDPRTMAILPIRGKILNVERARADRM 470
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A800LRE1_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LRE1_9ACTN) HSP 1 Score: 261 bits (668), Expect = 2.500e-81 Identity = 131/169 (77.51%), Postives = 145/169 (85.80%), Query Frame = 1
Query: 4 VNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
+N YAR +G LKEKDDNL GEDIREG+T IIS R+GDPQFEGQTKSKLGNV +RSLV++ TNER+AEWLEEHP E K ++ KA NA RARIAA DARK+ R KS LDGAGMPDKLKDCS++DP ELFIVEGDSAGGSAV+ARDP T AILPIRGKILNVERAR DKM
Sbjct: 301 MNRYARVKGLLKEKDDNLQGEDIREGMTTIISVRLGDPQFEGQTKSKLGNVEIRSLVQKATNERLAEWLEEHPSEAKRVLQKAINAQRARIAAHDARKSARRKSALDGAGMPDKLKDCSSRDPRESELFIVEGDSAGGSAVQARDPRTMAILPIRGKILNVERARPDKM 469
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A382KS51_9ZZZZ (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382KS51_9ZZZZ) HSP 1 Score: 254 bits (648), Expect = 8.490e-81 Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 1
Query: 4 VNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
+N +A+ RG +K+KDDNL GEDIREGLTAIIS R+G+PQFEGQTKSKLGNV +RSLV++ TNE++++WLEEHP E K+I+ KA NA RAR+AA DAR++ R KS LDGAGMP+KLKDCS++DP ELFIVEGDSAGGSA++ARDP T AILP+RGKILNVERAR D+M
Sbjct: 121 MNKHAKKRGLIKDKDDNLQGEDIREGLTAIISVRLGEPQFEGQTKSKLGNVDIRSLVQKTTNEKLSDWLEEHPAEAKIILQKAINAQRARLAAQDARRSARRKSALDGAGMPEKLKDCSSRDPRESELFIVEGDSAGGSAIQARDPRTMAILPLRGKILNVERARADRM 289
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A382FPE9_9ZZZZ (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382FPE9_9ZZZZ) HSP 1 Score: 253 bits (645), Expect = 1.920e-80 Identity = 123/169 (72.78%), Postives = 147/169 (86.98%), Query Frame = 1
Query: 4 VNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
VN YAR RG +K+KDDNL GEDIREGLTAI+S R+ DPQFEGQTKSKLGNV +RSLV++VTN+++A+WLEE+P E K +V KA NA RAR+AA +AR++ R KS LDGAGMPDKLKDC++KDP+ EL IVEGDSAGGSAV+ARDP T A+LPIRGKILNVERAR+D+M
Sbjct: 67 VNKYARRRGAIKDKDDNLQGEDIREGLTAIVSVRLVDPQFEGQTKSKLGNVEIRSLVQKVTNDKLADWLEENPSEAKRVVEKAVNAQRARLAAQEARRSARRKSALDGAGMPDKLKDCTSKDPKESELLIVEGDSAGGSAVQARDPRTMAVLPIRGKILNVERARVDRM 235
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A3D5K493_9ACTN (DNA gyrase subunit B n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K493_9ACTN) HSP 1 Score: 259 bits (661), Expect = 2.790e-80 Identity = 129/169 (76.33%), Postives = 143/169 (84.62%), Query Frame = 1
Query: 4 VNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
+N YA+ R LK+ DDNL GEDIREGLTAIIS R+ DPQFEGQTKSKLGNV MRSLV+R TN+R+A+WLEEHP E K IV KA NA RAR+AA DARK+ R KS LDGAGMPDKLKDC++KDP ELFIVEGDSAGGSAV+ARDP T AILPIRGKILNVERAR D+M
Sbjct: 302 MNRYAKKRNLLKDNDDNLQGEDIREGLTAIISVRLSDPQFEGQTKSKLGNVEMRSLVQRTTNDRLADWLEEHPPEAKAIVQKAINAQRARVAAQDARKSARRKSALDGAGMPDKLKDCASKDPRESELFIVEGDSAGGSAVQARDPRTMAILPIRGKILNVERARADRM 470
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Match: A0A6I3A784_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=root TaxID=1 RepID=A0A6I3A784_9ACTN) HSP 1 Score: 258 bits (658), Expect = 2.020e-79 Identity = 125/169 (73.96%), Postives = 146/169 (86.39%), Query Frame = 1
Query: 4 VNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGNVSMRSLVERVTNERMAEWLEEHPGEGKVIVTKATNAARARIAASDARKAIRSKSLLDGAGMPDKLKDCSAKDPERRELFIVEGDSAGGSAVRARDPETQAILPIRGKILNVERARIDKM 510
+N YAR +G LKEKD+NL GEDIREGLTAII+ ++ +PQFEGQTK KLGNVS+RSLVER TN+++AEWLEEHP E + V KAT +ARAR+AA +AR +R K+LLDGAGMPDKL+DCS+ DP RELFIVEGDSAGGSA +ARDP TQAILPIRGKILNVERAR+DKM
Sbjct: 348 INKYARAKGLLKEKDENLQGEDIREGLTAIIAVKLREPQFEGQTKGKLGNVSVRSLVERATNDKLAEWLEEHPSEARAAVAKATQSARARVAAQNARNTMRRKTLLDGAGMPDKLRDCSSSDPRERELFIVEGDSAGGSATQARDPRTQAILPIRGKILNVERARVDKM 516 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126066.5266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126066.5266.1 >prot_M-pyrifera_M_contig126066.5266.1 ID=prot_M-pyrifera_M_contig126066.5266.1|Name=mRNA_M-pyrifera_M_contig126066.5266.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp TVNAYARDRGFLKEKDDNLTGEDIREGLTAIISARIGDPQFEGQTKSKLGback to top mRNA from alignment at M-pyrifera_M_contig126066:3..512+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126066.5266.1 ID=mRNA_M-pyrifera_M_contig126066.5266.1|Name=mRNA_M-pyrifera_M_contig126066.5266.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig126066:3..512+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126066:3..512+ >mRNA_M-pyrifera_M_contig126066.5266.1 ID=mRNA_M-pyrifera_M_contig126066.5266.1|Name=mRNA_M-pyrifera_M_contig126066.5266.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig126066:3..512+ (Macrocystis pyrifera P11B4 male)back to top |