prot_M-pyrifera_M_contig125704.5194.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125704.5194.1
Unique Nameprot_M-pyrifera_M_contig125704.5194.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length63
Homology
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A0K8RE24_IXORI (Putative flap structure-specific endonuclease 1 n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A0K8RE24_IXORI)

HSP 1 Score: 80.1 bits (196), Expect = 5.250e-18
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL ++IADNAP AI E  + +YFGR IAIDASM LY FL+A+RQ+N   MLT++ GETT
Sbjct:    1 MGITGLSKVIADNAPSAIKEGDIKSYFGRKIAIDASMCLYQFLIAVRQENN--MLTNSDGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A7S4DYF1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DYF1_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 8.880e-17
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGIKGL + I+DNAP+AI E  + TYFGR +AIDASM LY FL+A+R    A MLT+ +GE T
Sbjct:    1 MGIKGLMKFISDNAPDAIKEGEIKTYFGRKVAIDASMSLYQFLIAVRSGPDAQMLTNEAGEVT 63          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A6B0V9Z3_IXORI (Flap endonuclease 1 n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0V9Z3_IXORI)

HSP 1 Score: 80.1 bits (196), Expect = 3.250e-16
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL ++IADNAP AI E  + +YFGR IAIDASM LY FL+A+RQ+N   MLT++ GETT
Sbjct:    1 MGITGLSKVIADNAPSAIKEGDIKSYFGRKIAIDASMCLYQFLIAVRQENN--MLTNSDGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A6P7VFA4_IXOSC (Flap endonuclease 1 n=8 Tax=Ixodidae TaxID=6939 RepID=A0A6P7VFA4_IXOSC)

HSP 1 Score: 80.1 bits (196), Expect = 3.400e-16
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL ++IADNAP AI E  + +YFGR IAIDASM LY FL+A+RQ+N   MLT++ GETT
Sbjct:    1 MGITGLSKVIADNAPSAIKEGDIKSYFGRKIAIDASMCLYQFLIAVRQENN--MLTNSDGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: B7Q1M0_IXOSC (Flap endonuclease 1 n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7Q1M0_IXOSC)

HSP 1 Score: 79.0 bits (193), Expect = 9.050e-16
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL ++IADNAP AI E  + +YFG+ IAIDASM LY FL+A+RQ+N   MLT++ GETT
Sbjct:    1 MGITGLSKVIADNAPSAIKEGDIKSYFGKKIAIDASMCLYQFLIAVRQENN--MLTNSDGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A177VS01_9BASI (Flap endonuclease 1 n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VS01_9BASI)

HSP 1 Score: 78.6 bits (192), Expect = 1.330e-15
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGIKGL  LI D AP+AI EA + TYFGR +AIDASM LY FL+A+RQ +   +++D SGETT
Sbjct:    1 MGIKGLTSLIQDEAPDAIKEADIKTYFGRKVAIDASMSLYQFLIAVRQQDGQQLMSD-SGETT 62          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A1Z5LFA5_ORNMO (Flap endonuclease (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LFA5_ORNMO)

HSP 1 Score: 78.2 bits (191), Expect = 1.700e-15
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL ++IAD+AP AI E  + +YFGR IAIDASM LY FL+A+RQ+N   MLT++ GETT
Sbjct:    1 MGITGLSKVIADHAPSAIKEGDIKSYFGRKIAIDASMCLYQFLIAVRQENN--MLTNSDGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: W2TRF6_NECAM (XPG protein n=1 Tax=Necator americanus TaxID=51031 RepID=W2TRF6_NECAM)

HSP 1 Score: 71.6 bits (174), Expect = 3.420e-15
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGIK L ++IADNAP AI    +  YFGR +AIDASM LY FL+A+RQD +   L   SGETT
Sbjct:    1 MGIKDLSKVIADNAPNAIKSGEMKGYFGRKVAIDASMCLYQFLIAVRQDGS--QLQSESGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: A0A8B9H2M9_ASTMX (XPGN domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9H2M9_ASTMX)

HSP 1 Score: 71.2 bits (173), Expect = 4.400e-15
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL +LIAD AP AI E  +  YFGR IA+DASM +Y FL+A+RQD    +L +  GETT
Sbjct:    1 MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAVDASMCIYQFLIAVRQDGN--VLQNEDGETT 61          
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Match: B5XAA5_SALSA (Flap endonuclease 1-B n=2 Tax=Salmo salar TaxID=8030 RepID=B5XAA5_SALSA)

HSP 1 Score: 72.4 bits (176), Expect = 6.110e-15
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDNAAYMLTDASGETT 63
            MGI GL +LIAD AP AI E  +  YFGR IAIDASM +Y FLVA+RQD    +L + +GETT
Sbjct:    1 MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGN--VLQNENGETT 61          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125704.5194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K8RE24_IXORI5.250e-1863.49Putative flap structure-specific endonuclease 1 n=... [more]
A0A7S4DYF1_9EUKA8.880e-1760.32Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A6B0V9Z3_IXORI3.250e-1663.49Flap endonuclease 1 n=1 Tax=Ixodes ricinus TaxID=3... [more]
A0A6P7VFA4_IXOSC3.400e-1663.49Flap endonuclease 1 n=8 Tax=Ixodidae TaxID=6939 Re... [more]
B7Q1M0_IXOSC9.050e-1661.90Flap endonuclease 1 n=1 Tax=Ixodes scapularis TaxI... [more]
A0A177VS01_9BASI1.330e-1561.90Flap endonuclease 1 n=2 Tax=Tilletia TaxID=13289 R... [more]
A0A1Z5LFA5_ORNMO1.700e-1561.90Flap endonuclease (Fragment) n=1 Tax=Ornithodoros ... [more]
W2TRF6_NECAM3.420e-1558.73XPG protein n=1 Tax=Necator americanus TaxID=51031... [more]
A0A8B9H2M9_ASTMX4.400e-1557.14XPGN domain-containing protein n=1 Tax=Astyanax me... [more]
B5XAA5_SALSA6.110e-1560.32Flap endonuclease 1-B n=2 Tax=Salmo salar TaxID=80... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..63
e-value: 1.5E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR11081:SF51FLAP ENDONUCLEASE 1coord: 1..63
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 1..52
e-value: 1.9E-10
score: 41.1
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 1..63
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125704contigM-pyrifera_M_contig125704:148..336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125704.5194.1mRNA_M-pyrifera_M_contig125704.5194.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125704 148..336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125704.5194.1 ID=prot_M-pyrifera_M_contig125704.5194.1|Name=mRNA_M-pyrifera_M_contig125704.5194.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
MGIKGLKRLIADNAPEAIHEAGVPTYFGRSIAIDASMFLYSFLVAIRQDN
AAYMLTDASGETT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006085XPG_DNA_repair_N
IPR006084XPG/Rad2
IPR029060PIN-like_dom_sf