prot_M-pyrifera_M_contig102443.518.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102443.518.1
Unique Nameprot_M-pyrifera_M_contig102443.518.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: W7TVA4_9STRA (Platelet-activating factor acetylhydrolase ib subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVA4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.930e-22
Identity = 46/104 (44.23%), Postives = 71/104 (68.27%), Query Frame = 0 
Query:    1 HILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVWGFR 104
            ++++ SRD T+ ++   TG CL  ++ HE+WVR   FHPS    LSV++DR+L V+D+   R  +++ DAHE FV+A+A HP LPY+AT SV+ E  +++W  R
Sbjct:  336 YLVSGSRDKTIMLWNARTGQCLLRLADHENWVRSVRFHPSGQFLLSVSDDRSLRVFDIAKARCIRSLPDAHEQFVSALAQHPTLPYLATGSVNRE--IKLWECR 437
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A5D6Y4C8_9STRA (Lissencephaly-1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4C8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.360e-19
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            +++ SRD TVR++   +GA L   + HE+WVR   FHP     +SVAEDRTL V+D+ TGR  +T+ +AH HF+T+   HP LP + T  +  ++ + VW
Sbjct:  356 LVSGSRDRTVRLWEAFSGALLMNFASHENWVRCVRFHPCGKYVISVAEDRTLRVYDIETGRCVRTLDEAHAHFLTSADVHPSLPLIVTGGI--DKVINVW 453
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A8K1CCN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCN7_PYTOL)

HSP 1 Score: 90.1 bits (222), Expect = 5.280e-19
Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            IL+ SRD TVR++   +G  L   + HE+WVR   FHP     +SVAED+T+ V+D+ TGR  +TV +AH HF+T++  HP LP + T S+  ++ + VW
Sbjct:  327 ILSGSRDRTVRLWEAFSGTMLMNFASHENWVRCVRFHPCGKYVVSVAEDKTIRVFDIETGRCVRTVDEAHGHFLTSLDVHPTLPLMVTGSI--DKLINVW 424
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: F0WCC4_9STRA (Lissencephaly-1 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCC4_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.110e-18
Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = 0 
Query:    1 HILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            ++L+ SRD TVR++   +G  L   + HE+WVR   FHPS    +S AED+++ V+D+ TGR  +T+ DAH HFVT +  HP LP + +  +  ++ + VW
Sbjct:  352 YLLSGSRDRTVRLWEALSGVLLMNFTQHENWVRMVRFHPSGKYVISAAEDKSVRVFDIETGRCVRTLLDAHTHFVTCLDIHPTLPLLISGGI--DKVINVW 450
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: K3WAC5_GLOUD (Lissencephaly-1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAC5_GLOUD)

HSP 1 Score: 88.2 bits (217), Expect = 3.010e-18
Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            +L+ SRD TVR++   +G  L   + HE+WVR   FHP    A+S AED+T+ V+D+ TGR  +T+ +AH HF+T+V  HP LP + + S+  ++ + VW
Sbjct:  365 LLSGSRDRTVRLWEAFSGTLLMNFASHENWVRCVRFHPCGKYAISAAEDKTIRVYDLETGRCVRTLDEAHSHFLTSVDVHPTLPLMISGSI--DKLINVW 462
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A2D4CDK0_PYTIN (Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDK0_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 7.380e-18
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            +L+ SRD TVR++   +   L   S HE+WVR   FHP    A+SVAEDRT+ V D+ TGR  +TV  AHEHF+T++  H  LP + T  +  ++ + VW
Sbjct:  347 LLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGI--DKHINVW 444
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A7S2TW91_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW91_9EUKA)

HSP 1 Score: 74.3 bits (181), Expect = 2.240e-14
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTG-RPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            I +ASRD T+++F + +GA +  ++ HE+WVR  +FHPS    LS A+D+T+ VWD+    R +K + DAH+ FVT +  +   P +A+  V  +  +++W
Sbjct:   78 IASASRDKTIKIFHIPSGAIVADINGHENWVRGVLFHPSGKYLLSCADDQTIRVWDLEKRFRCRKILEDAHDPFVTCIDWNMSRPVLASGGV--DNIMKIW 176
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A2G9U4F5_TELCI (WD domain, G-beta repeat protein (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9U4F5_TELCI)

HSP 1 Score: 77.0 bits (188), Expect = 2.660e-14
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRL------PYVATASVSSEQQVRVW 101
            +++ SRD  ++++   TG  +  +  H++WVR   FHP     +SVA+D+TL VWD+   R  KT+ DAH+HFVT+VA H         P     S S ++ +++W
Sbjct:  228 VVSGSRDKMIKIWDALTGTVMFSLIGHDNWVRGLRFHPRGKFLVSVADDKTLRVWDIAQRRCAKTI-DAHQHFVTSVAGHKANGDLGAGPTHVVVSGSRDKMIKIW 332
[Close]
BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A2R5H004_9STRA (Lissencephaly-1 homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H004_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.330e-13
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 0 
Query:    1 HILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            ++++ SRD TV+++ VATG CL  ++ H++WVR   F P                      R  +TV +AH HF+T++A HP+L  VAT SV +E  V +W
Sbjct:  359 YVVSGSRDRTVKVWQVATGVCLMTLTGHDNWVRAVAFQPHGKYXXXXXXXXXXXXXXXXQQRCVRTVANAHSHFITSMAPHPKLALVATGSVDTE--VALW 457
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BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Match: A0A7S3ZCQ1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCQ1_9EUKA)

HSP 1 Score: 74.3 bits (181), Expect = 2.000e-13
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 0 
Query:    2 ILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAEDRTLVVWDVCTG-RPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRVW 101
            I +ASRD T+++F + +GA +  ++ HE+WVR  +FHPS    LS A+D+T+ VWD+    R +K + DAH+ FVT +  +   P +A+  V  +  +++W
Sbjct:  266 IASASRDKTIKIFHIPSGAMVADINGHENWVRGVLFHPSGKYLLSCADDQTIRVWDLEKRFRCRKILEDAHDPFVTCIDWNMSRPVLASGGV--DNIMKIW 364
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102443.518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TVA4_9STRA8.930e-2244.23Platelet-activating factor acetylhydrolase ib subu... [more]
A0A5D6Y4C8_9STRA4.360e-1943.00Lissencephaly-1 homolog n=1 Tax=Pythium brassicum ... [more]
A0A8K1CCN7_PYTOL5.280e-1944.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WCC4_9STRA2.110e-1840.59Lissencephaly-1 homolog n=1 Tax=Albugo laibachii N... [more]
K3WAC5_GLOUD3.010e-1842.00Lissencephaly-1 homolog n=1 Tax=Globisporangium ul... [more]
A0A2D4CDK0_PYTIN7.380e-1844.00Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum... [more]
A0A7S2TW91_9EUKA2.240e-1437.62Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A2G9U4F5_TELCI2.660e-1435.85WD domain, G-beta repeat protein (Fragment) n=1 Ta... [more]
A0A2R5H004_9STRA1.330e-1336.63Lissencephaly-1 homolog n=1 Tax=Hondaea fermentalg... [more]
A0A7S3ZCQ1_9EUKA2.000e-1337.62Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 18..57
e-value: 1.5E-5
score: 34.4
coord: 60..102
e-value: 0.084
score: 22.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 19..57
e-value: 2.2E-4
score: 21.9
coord: 65..101
e-value: 0.058
score: 14.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 25..66
score: 11.377
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..104
e-value: 1.2E-23
score: 85.4
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 2..103
NoneNo IPR availablePANTHERPTHR44129:SF7coord: 2..103
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 44..58
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..104
score: 19.406
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102443contigM-pyrifera_M_contig102443:26..479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102443.518.1mRNA_M-pyrifera_M_contig102443.518.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102443 26..479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102443.518.1 ID=prot_M-pyrifera_M_contig102443.518.1|Name=mRNA_M-pyrifera_M_contig102443.518.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
HILTASRDLTVRMFVVATGACLHVMSHHESWVRRAVFHPSAPVALSVAED
RTLVVWDVCTGRPKKTVRDAHEHFVTAVAAHPRLPYVATASVSSEQQVRV
WGFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf