mRNA_M-pyrifera_M_contig125590.5179.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: A0A031JIY0_9SPHN (Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Novosphingobium resinovorum TaxID=158500 RepID=A0A031JIY0_9SPHN) HSP 1 Score: 243 bits (620), Expect = 1.930e-80 Identity = 110/144 (76.39%), Postives = 126/144 (87.50%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEHSDKAGW 432
I LWRDVMGFE+ VETVIPDG PGP+T+MYP LLDDIFK+KGARS+MALLSS +GA IELQEC NPAI +TP ENLRYGHTG HELGL+V DID +FEKVRAAGY TQT+YVWQCA++GRSFLFYD+DGNMIQ+WE+ + W
Sbjct: 17 IRLWRDVMGFELGVETVIPDGAEPGPNTFMYPALLDDIFKIKGARSRMALLSSKDGAFIELQECLNPAITKTPEENLRYGHTGIHELGLLVTDIDGWFEKVRAAGYRTQTDYVWQCASMGRSFLFYDQDGNMIQLWENLGEPEW 160
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: UPI001BAF8B50 (VOC family protein n=1 Tax=Sphingobium phenoxybenzoativorans TaxID=1592790 RepID=UPI001BAF8B50) HSP 1 Score: 239 bits (610), Expect = 6.450e-79 Identity = 105/144 (72.92%), Postives = 127/144 (88.19%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEHSDKAGW 432
I LWRDV+GFE+ V+TVIPDGP PGPDT+MYPELLDDIFKVKGA+S+MALLSSAEGA IELQEC+NP ++TP ENLRY HTG HELGL+V IDA+++K++AAGY QT+YVWQCA++GRSFLFYD+DGNMIQ+WE+ + W
Sbjct: 17 IKLWRDVLGFELGVQTVIPDGPEPGPDTFMYPELLDDIFKVKGAKSRMALLSSAEGAFIELQECQNPPAQKTPEENLRYAHTGIHELGLLVTGIDAWYDKIKAAGYRMQTDYVWQCASMGRSFLFYDQDGNMIQIWENLGEPEW 160
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: UPI0012E88E9B (VOC family protein n=1 Tax=Sphingomonas profundi TaxID=2681549 RepID=UPI0012E88E9B) HSP 1 Score: 238 bits (606), Expect = 2.810e-78 Identity = 106/146 (72.60%), Postives = 125/146 (85.62%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEH--SDKAGW 432
I LWRD MGFE+ V+TVIPDGP GP+T+MYP LLDDIFKVKGARSKMALLSS EGA IELQECENP I++TP ENLRYGHTG HELGL+V+D+D ++ +++AAGY QT+YVW CAN+GRSFLFYD+DGNMIQMWE+ + A W
Sbjct: 17 IKLWRDTMGFELGVQTVIPDGPEAGPETFMYPALLDDIFKVKGARSKMALLSSKEGAFIELQECENPVIKKTPEENLRYGHTGIHELGLIVEDLDGWYARIKAAGYRMQTDYVWSCANLGRSFLFYDQDGNMIQMWENPPGEAATW 162
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: UPI00167346DE (VOC family protein n=2 Tax=Novosphingobium colocasiae TaxID=1256513 RepID=UPI00167346DE) HSP 1 Score: 234 bits (598), Expect = 4.340e-77 Identity = 104/144 (72.22%), Postives = 125/144 (86.81%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEHSDKAGW 432
I LWRDVMGFE+ V+TVIPDG PGP+T+M+P+LLDDIFKVKGA+S+MALLSS +GA IELQEC NP IE+TP ENLRYGHTG HELGL+V+ ID +FEK++AAGY QT+YVWQCA IGRSF+FYD+DGNMIQ+WE+ + W
Sbjct: 17 IRLWRDVMGFELGVQTVIPDGQEPGPNTFMHPKLLDDIFKVKGAQSRMALLSSKDGAFIELQECINPKIEKTPEENLRYGHTGIHELGLLVEGIDGWFEKIKAAGYRMQTDYVWQCAEIGRSFIFYDQDGNMIQIWENMGQPEW 160
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: A0A1C6NMS7_9BURK (Catechol 2,3-dioxygenase n=1 Tax=Variovorax sp. HW608 TaxID=1034889 RepID=A0A1C6NMS7_9BURK) HSP 1 Score: 190 bits (482), Expect = 2.260e-59 Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPE-LLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEHSDKA 426
I LWRD+MGF + + +IPDG GP T M P LL+D++KV GA +++A+L S EGA+IEL + + P +++TPP+ L YGH+G ELGLV+DDID FFEKVRAAGY TQT+YVW CAN+GRSF+FYDKDGNMIQ+WEH+ A
Sbjct: 17 IRLWRDLMGFTLKADLIIPDGEEYGP-TVMAPRILLEDLYKVPGATARVAVLISKEGAMIELLQPQTPHVQQTPPDRLLYGHSGIRELGLVLDDIDDFFEKVRAAGYRTQTDYVWPCANMGRSFIFYDKDGNMIQIWEHAVDA 158
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: A0A0D4ZZW6_9SPHN (VOC domain-containing protein n=2 Tax=Sphingomonas sp. JE1 TaxID=1628059 RepID=A0A0D4ZZW6_9SPHN) HSP 1 Score: 178 bits (452), Expect = 8.250e-55 Identity = 83/142 (58.45%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEHSDKA 426
I +W D+MGFE V+ IPDG PD LL+D++KV GA + +A+L S EGA+IEL E P +TPPE LRY TG HELGLV++ ID FFEKVRA GYETQTEYVW CA +G++FLFYD DGN+IQ+WEH A
Sbjct: 17 IRMWEDLMGFETKVKMTIPDGDDWAPDVMAPRALLEDLYKVPGATATVAVLLSKEGAMIELLEPHVPTTRQTPPEQLRYADTGIHELGLVMEGIDDFFEKVRAQGYETQTEYVWPCATMGKTFLFYDPDGNLIQIWEHGPDA 158
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: A0A7R7CHK9_9HYPH (VOC domain-containing protein n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A7R7CHK9_9HYPH) HSP 1 Score: 176 bits (446), Expect = 6.330e-54 Identity = 85/145 (58.62%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEHSDKAGWK 435
+ LW DV+GF + IPDG T M E LDDIF V+GARS+MALL+S++GA+IELQ P IERTPP+NLRY HTG HELG V+DID +FE++RAAGYETQT YVW A G+SFLFYD+DGN+IQ E + W+
Sbjct: 18 LRLWIDVLGFTLTHRGFIPDGRRGQSGTRMPAETLDDIFGVEGARSEMALLTSSDGAMIELQSPLVPKIERTPPQNLRYRHTGIHELGFQVEDIDGWFERIRAAGYETQTNYVWPWAINGKSFLFYDQDGNLIQFCEQKGTSSWR 162
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: A0A6M2BXV1_9GAMM (VOC family protein n=1 Tax=Solimonas terrae TaxID=1396819 RepID=A0A6M2BXV1_9GAMM) HSP 1 Score: 169 bits (428), Expect = 2.850e-51 Identity = 76/137 (55.47%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWE 411
I WR++MGF +AV T IPDG GP + L+ D F + AR+ +AL++SA+GA+IEL E+P++E TP L Y HTG HEL L V DID FF+KVR AG+ QT+YVW CAN+GRSF+FYD +GNMIQ+WE
Sbjct: 17 IDFWREIMGFTLAVRTSIPDGDAAGPTVFAPRSLMRDTFGDESARATVALMTSADGAMIELLAPEHPSVESTPAAQLLYRHTGIHELALAVSDIDVFFDKVRRAGHRLQTDYVWSCANLGRSFIFYDPEGNMIQIWE 153
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: UPI001BAA245C (VOC family protein n=1 Tax=Bradyrhizobium tropiciagri TaxID=312253 RepID=UPI001BAA245C) HSP 1 Score: 166 bits (419), Expect = 6.650e-50 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWE 411
+ LWRDV+GF + V+ IPDG GP+ Y +LLD I +G++S+M ++ SAEGA++ELQEC P +++ P E + Y TG EL L V +ID +FEKVR AGY+TQT+ VW CANI RSFLFYD+DGN+IQM E
Sbjct: 17 LRLWRDVLGFNVRVDMTIPDGQASGPNVYFSGDLLDQILGARGSKSRMVIVWSAEGAVVELQECATPKLQKRPSERVGYRETGILELALQVKNIDGWFEKVRGAGYKTQTDGVWSCANILRSFLFYDQDGNLIQMCE 153
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Match: A0A848LAT8_9ACTN (VOC family protein n=1 Tax=Gordonia asplenii TaxID=2725283 RepID=A0A848LAT8_9ACTN) HSP 1 Score: 159 bits (401), Expect = 4.210e-47 Identity = 75/140 (53.57%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 1 IHLWRDVMGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAE--GALIELQECENPAIERTPPENLRYGHTGFHELGLVVDDIDAFFEKVRAAGYETQTEYVWQCANIGRSFLFYDKDGNMIQMWEH 414
+ L+RD++GF++ +T+IPD P T+ + LDDIFKV+G++S+M LL+ E G +E Q+ NP ++R P E LRY HTG ELG V DID +FEKVR+AGYETQTEYVW+ I RSFLFYD DGNM+Q+ E+
Sbjct: 17 LKLYRDILGFKVVTDTIIPDRPE---GTFFDQKTLDDIFKVEGSKSRMVLLAPPEVDGTFLEFQQPLNPPVQRKPKETLRYAHTGISELGFEVTDIDQWFEKVRSAGYETQTEYVWEAGGIVRSFLFYDPDGNMVQLCEN 153 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125590.5179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125590.5179.1 >prot_M-pyrifera_M_contig125590.5179.1 ID=prot_M-pyrifera_M_contig125590.5179.1|Name=mRNA_M-pyrifera_M_contig125590.5179.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp MGFEIAVETVIPDGPGPGPDTYMYPELLDDIFKVKGARSKMALLSSAEGAback to top mRNA from alignment at M-pyrifera_M_contig125590:2..439+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125590.5179.1 ID=mRNA_M-pyrifera_M_contig125590.5179.1|Name=mRNA_M-pyrifera_M_contig125590.5179.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig125590:2..439+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125590:2..439+ >mRNA_M-pyrifera_M_contig125590.5179.1 ID=mRNA_M-pyrifera_M_contig125590.5179.1|Name=mRNA_M-pyrifera_M_contig125590.5179.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig125590:2..439+ (Macrocystis pyrifera P11B4 male)back to top |