prot_M-pyrifera_M_contig102422.512.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102422.512.1
Unique Nameprot_M-pyrifera_M_contig102422.512.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length122
Homology
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BLAST of mRNA_M-pyrifera_M_contig102422.512.1 vs. uniprot
Match: A0A3D0N141_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D0N141_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 5.510e-7
Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:   10 LSTKYSYAQTSLVPAHHSVYDYLFYQRAVGNIPFYNHEDLPISRGEIVDYLKEIEVSGSLSFSDMETIKAYLVEF 84
            LS    Y+Q  L P    VY +L   +  G IP YN   LP+SR ++ +YL +I  S S+S SD E +K YL+++
Sbjct:   15 LSFSNLYSQQELTPVSDDVYFFLKRMQVAGVIPDYNSSLLPLSRKQVANYLNQINNSSSVSSSDREVLKGYLLDY 89
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102422.512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3D0N141_9BACT5.510e-740.00Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..122
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102422contigM-pyrifera_M_contig102422:168..533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102422.512.1mRNA_M-pyrifera_M_contig102422.512.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102422 156..533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102422.512.1 ID=prot_M-pyrifera_M_contig102422.512.1|Name=mRNA_M-pyrifera_M_contig102422.512.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp
MLPVLVAFFLSTKYSYAQTSLVPAHHSVYDYLFYQRAVGNIPFYNHEDLP
ISRGEIVDYLKEIEVSGSLSFSDMETIKAYLVEFDQVYLKRTVRRGLFTS
NDPILDRLEYYLLCNDEPLIFS
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