prot_M-pyrifera_M_contig98954.22757.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98954.22757.1
Unique Nameprot_M-pyrifera_M_contig98954.22757.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: A0A7S2DWQ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.310e-19
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    6 ELPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            E P A VQRIIK VLP++ Q+TKE++ A  KA  +FI+YLT C++D+C  GKRSTISS DV  AL ELEF
Sbjct:   25 EPPMACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEF 94          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: A0A7S2SN07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.340e-18
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    6 ELPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            E P+A VQRIIKS LP+N Q+TKE++ A  KA  +FI+YLT C++D+C   KRSTISS DV  A+ ELEF
Sbjct:   72 EPPQACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEF 141          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: Q28J93_XENTR (DNA polymerase epsilon subunit 3 n=3 Tax=Anura TaxID=8342 RepID=Q28J93_XENTR)

HSP 1 Score: 77.8 bits (190), Expect = 1.620e-16
Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AVV RIIK  LPE   ++KEAR AI +A +VF+LY T+C++++ + GKR T+++TDV  A+ E+EF
Sbjct:   10 LPNAVVTRIIKEALPEGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNATDVLAAMEEMEF 78          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: D8LKB4_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.070e-16
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    6 ELPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            E P+A VQR+IKSVLP+N Q+ K+A+ A  ++  +FI+YLTAC++D+C   KR TIS+ DV  A+ ELEF
Sbjct:   10 EPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEF 79          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: V4CE76_LOTGI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4CE76_LOTGI)

HSP 1 Score: 77.4 bits (189), Expect = 3.850e-16
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AVV RIIK  +PE   ++KEAR AI KA +VF+LY T+CS+++ + GKR TI++TDV  A+ ++EF
Sbjct:   10 LPNAVVTRIIKEAIPEGINVSKEARLAISKAASVFVLYATSCSNNFALKGKRKTINATDVISAMEDMEF 78          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: A0A6P8IX46_ACTTE (DNA polymerase epsilon subunit 3-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IX46_ACTTE)

HSP 1 Score: 76.6 bits (187), Expect = 4.470e-16
Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AV+ R++K VLP+   + KEAR AI KA +VF+LY T+C+++  ISGKR T+++ DV  AL E+EF
Sbjct:   10 LPNAVIARLVKDVLPDGVNIAKEARSAIGKAASVFVLYATSCANNIAISGKRKTLTAADVLQALEEMEF 78          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: A0A2T7NKY6_POMCA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NKY6_POMCA)

HSP 1 Score: 77.0 bits (188), Expect = 5.090e-16
Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AVV RIIK  +PE   ++KEAR AI KA +VF+LY T+CS+++ + GKR TIS+ DV  A+ E+EF
Sbjct:   10 LPNAVVGRIIKEAIPEGVNVSKEARLAISKAASVFVLYATSCSNNFALKGKRKTISAQDVLNAMEEMEF 78          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: A0A8J6EIA2_ELECQ (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EIA2_ELECQ)

HSP 1 Score: 76.3 bits (186), Expect = 6.320e-16
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AV+ RIIK  LPE   ++KEAR AI +A +VF+LY T+C++++ + GKR T++ TDV  A+ E+EF
Sbjct:   10 LPNAVITRIIKEALPEGVNVSKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNVTDVMAAVEEMEF 78          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: UPI0003F07252 (DNA polymerase epsilon subunit 3 n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F07252)

HSP 1 Score: 75.9 bits (185), Expect = 7.050e-16
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AV+ RIIK  LP+   ++KEAR AI +A +VF+LY T+C++++ + GKR T+++TDV  A+ E+EF
Sbjct:   10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNATDVLSAMEEMEF 78          
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Match: A0A6P7YFJ4_9AMPH (DNA polymerase epsilon subunit 3 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7YFJ4_9AMPH)

HSP 1 Score: 75.9 bits (185), Expect = 8.940e-16
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    7 LPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSSDYCISGKRSTISSTDVELALGELEF 75
            LP AV+ RIIK  LPE   ++KEAR AI +A +VF+LY T+C++++ + GKR T++S DV  A+ E+EF
Sbjct:   10 LPNAVITRIIKDALPEGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNSGDVLAAMEEMEF 78          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98954.22757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DWQ9_9STRA7.310e-1961.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SN07_9STRA1.340e-1860.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
Q28J93_XENTR1.620e-1652.17DNA polymerase epsilon subunit 3 n=3 Tax=Anura Tax... [more]
D8LKB4_ECTSI2.070e-1654.29CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
V4CE76_LOTGI3.850e-1653.62CBFD_NFYB_HMF domain-containing protein n=1 Tax=Lo... [more]
A0A6P8IX46_ACTTE4.470e-1652.17DNA polymerase epsilon subunit 3-like n=1 Tax=Acti... [more]
A0A2T7NKY6_POMCA5.090e-1655.07CBFD_NFYB_HMF domain-containing protein n=1 Tax=Po... [more]
A0A8J6EIA2_ELECQ6.320e-1650.72CBFD_NFYB_HMF domain-containing protein n=1 Tax=El... [more]
UPI0003F072527.050e-1649.28DNA polymerase epsilon subunit 3 n=1 Tax=Elephantu... [more]
A0A6P7YFJ4_9AMPH8.940e-1650.72DNA polymerase epsilon subunit 3 n=2 Tax=Gymnophio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..75
e-value: 6.2E-25
score: 89.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 7..75
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 6..70
e-value: 1.5E-13
score: 50.8
NoneNo IPR availablePANTHERPTHR46172DNA polymerase epsilon subunit 3coord: 3..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98954contigM-pyrifera_M_contig98954:341..694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98954.22757.1mRNA_M-pyrifera_M_contig98954.22757.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98954 341..694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98954.22757.1 ID=prot_M-pyrifera_M_contig98954.22757.1|Name=mRNA_M-pyrifera_M_contig98954.22757.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
MDEAEELPKAVVQRIIKSVLPENAQMTKEAREAIVKAGTVFILYLTACSS
DYCISGKRSTISSTDVELALGELEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain