prot_M-pyrifera_M_contig98804.22738.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98804.22738.1
Unique Nameprot_M-pyrifera_M_contig98804.22738.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
BLAST of mRNA_M-pyrifera_M_contig98804.22738.1 vs. uniprot
Match: A0A7S0RYD6_9CHLO (Calcium uniporter protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RYD6_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 2.570e-6
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 0
Query:   36 LSEYFELAGRCGLTH--AEAEEVLEHLHSAGVVLHFATDPDVEDIVLVKAEEVLDDVFGDL--GLEGPQKTFAKAQRSRKDAELAHLRAEIEPLQQVRSLVLDRARKTADRAMWGGFAGLLGVTGFYVYLTTTALSWDSVEPLVWI 177
            L ++ ++A   G+ +  AEA EVL  LH AGVVLH        D+V ++AEE+ + V   L  G E  Q+   K +    D +  H   E             ++R  A+  +W G   L G    +++LT   LSWD +EP  +I
Sbjct:  105 LDKFTQMAINSGVANNSAEATEVLNVLHKAGVVLHH------HDLVYLRAEEIAEMVMLMLPGGKESAQQKLQKVENELADLDKVHDDLE------------KKSRSVANMFLWSGLFILTGQFLGFIWLTWWELSWDVMEPFGYI 232          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98804.22738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0RYD6_9CHLO2.570e-631.51Calcium uniporter protein n=1 Tax=Chlamydomonas le... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006769Calcium uniporter protein, C-terminalPFAMPF04678MCUcoord: 52..174
e-value: 4.5E-13
score: 49.7
IPR039055MCU familyPANTHERPTHR13462FAMILY NOT NAMEDcoord: 23..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..178
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98804contigM-pyrifera_M_contig98804:15..548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98804.22738.1mRNA_M-pyrifera_M_contig98804.22738.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98804 15..548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98804.22738.1 ID=prot_M-pyrifera_M_contig98804.22738.1|Name=mRNA_M-pyrifera_M_contig98804.22738.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
SALDVRELSVPSLLRLGATVLTRKALLARKERALRLSEYFELAGRCGLTH
AEAEEVLEHLHSAGVVLHFATDPDVEDIVLVKAEEVLDDVFGDLGLEGPQ
KTFAKAQRSRKDAELAHLRAEIEPLQQVRSLVLDRARKTADRAMWGGFAG
LLGVTGFYVYLTTTALSWDSVEPLVWIT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006769MCU_C
IPR039055MCU_fam