prot_M-pyrifera_M_contig98692.22717.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig98692.22717.1
Unique Name	prot_M-pyrifera_M_contig98692.22717.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	85

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig98692.22717.1 vs. uniprot
Match: F0SG89_RUBBR (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=F0SG89_RUBBR)

HSP 1 Score: 60.1 bits (144), Expect = 9.390e-9
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0

Query:    4 DVTPSDQE-IPLKERIVNWLRTAAAAGYGLSLLLHGLLLLLMALWFFPQIKEAMSITTVVQSDTEELQPFDAMDDIHLESPAG 85
            D  P ++E +PL ERI NWL +AAAAGYG+SLL+H ++L++M+L    ++     + T V    E  Q  D MD + ++ PAG
Sbjct:   41 DSQPEEEEQLPLTERIRNWLFSAAAAGYGMSLLVHAIILIIMSLVVIHELARQEQMNTTVTESGEVEQLEDVMD-VRIDLPAG 122

[Close]

BLAST of mRNA_M-pyrifera_M_contig98692.22717.1 vs. uniprot
Match: A0A356AB97_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A356AB97_9PLAN)

HSP 1 Score: 52.8 bits (125), Expect = 4.190e-6
Identity = 31/86 (36.05%), Postives = 50/86 (58.14%), Query Frame = 0

Query:    1 PPPDVTPSDQEIP-LKERIVNWLRTAAAAGYGLSLLLHGLLLLLMALWFFPQIKEAMSITTVVQSDTEELQPFDAMDDIHLESPAG 85
            PP  V P D  +  + + +  W  +A AAGYG+SLL HGLLL+ M+L+FF    +   I + + ++ +E   FD + D+ ++ P G
Sbjct:   45 PPHAVEPFDFSLKGIFKAVKRWFHSAVAAGYGISLLFHGLLLIAMSLYFFSDYVQENYIESSIATN-DEAMVFDEVLDVRIDMPTG 129

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig98692.22717.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig98692.22717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
F0SG89_RUBBR	9.390e-9	42.17	Uncharacterized protein n=3 Tax=Planctomycetaceae ...	[more]
A0A356AB97_9PLAN	4.190e-6	36.05	Uncharacterized protein n=2 Tax=Planctomycetaceae ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..26
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..49
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 50..85
None	No IPR available	TMHMM	TMhelix		coord: 27..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig98692	contig	M-pyrifera_M_contig98692:58..312 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig98692.22717.1	mRNA_M-pyrifera_M_contig98692.22717.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig98692 58..312 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig98692.22717.1 ID=prot_M-pyrifera_M_contig98692.22717.1|Name=mRNA_M-pyrifera_M_contig98692.22717.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
PPPDVTPSDQEIPLKERIVNWLRTAAAAGYGLSLLLHGLLLLLMALWFFP
QIKEAMSITTVVQSDTEELQPFDAMDDIHLESPAG