prot_M-pyrifera_M_contig98609.22703.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98609.22703.1
Unique Nameprot_M-pyrifera_M_contig98609.22703.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length102
Homology
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BLAST of mRNA_M-pyrifera_M_contig98609.22703.1 vs. uniprot
Match: A0A517WAI2_9PLAN (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=3 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WAI2_9PLAN)

HSP 1 Score: 206 bits (525), Expect = 1.970e-65
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:    1 MSFDRAVSLARYNWPLYLTCCLVAAVGFTIWTTQLGPPLILYLGLFGAVVATWYAIASFVAFHIMFDRPDFLSGDWLTRCVELPPQSCVQLSICVEETTLPV 102
            MSFDRAVSLARYNWPLYLTCCLVAAVGFTIWT+QLGPP ILYLGLF AVVATWYAIASFVAFHIMFD PDFLSGDWLTRCVELPPQSCVQLSICVEETTLPV
Sbjct:    1 MSFDRAVSLARYNWPLYLTCCLVAAVGFTIWTSQLGPPPILYLGLFCAVVATWYAIASFVAFHIMFDHPDFLSGDWLTRCVELPPQSCVQLSICVEETTLPV 102
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BLAST of mRNA_M-pyrifera_M_contig98609.22703.1 vs. uniprot
Match: A0A517X1B6_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X1B6_9PLAN)

HSP 1 Score: 172 bits (437), Expect = 9.430e-52
Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0 
Query:    1 MSFDRAVSLARYNWPLYLTCCLVAAVGFTIWTTQLGPPLILYLGLFGAVVATWYAIASFVAFHIMFDRPDFLSGDWLTRCVELPPQSCVQLSICVEETTLPV 102
            MSFDRAVSLARYNWPLYLTC L AAVGFTIWT QL P  I YLG  GA+VATWYAI+SFVAF++MFDR DFLSG+WLT CVE  PQ+CVQLS+CVEETTLP+
Sbjct:   39 MSFDRAVSLARYNWPLYLTCFLGAAVGFTIWTIQLVPSPIRYLGFLGALVATWYAISSFVAFYVMFDRSDFLSGEWLTHCVEQSPQTCVQLSVCVEETTLPI 140
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98609.22703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A517WAI2_9PLAN1.970e-6596.08Ubiquinone/menaquinone biosynthesis C-methyltransf... [more]
A0A517X1B6_9PLAN9.430e-5279.41Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98609contigM-pyrifera_M_contig98609:4..309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98609.22703.1mRNA_M-pyrifera_M_contig98609.22703.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98609 4..309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98609.22703.1 ID=prot_M-pyrifera_M_contig98609.22703.1|Name=mRNA_M-pyrifera_M_contig98609.22703.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
MSFDRAVSLARYNWPLYLTCCLVAAVGFTIWTTQLGPPLILYLGLFGAVV
ATWYAIASFVAFHIMFDRPDFLSGDWLTRCVELPPQSCVQLSICVEETTL
PV
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