prot_M-pyrifera_M_contig9799.22563.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9799.22563.1
Unique Nameprot_M-pyrifera_M_contig9799.22563.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length207
Homology
BLAST of mRNA_M-pyrifera_M_contig9799.22563.1 vs. uniprot
Match: D8LF89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF89_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.030e-49
Identity = 119/252 (47.22%), Postives = 146/252 (57.94%), Query Frame = 0
Query:    1 SSSPSAPAVPVPTPAVVRVFACGGTHIPAPARPMLRRVDVETASTSGAVSANAGSHPA--------SNL---------RD-------------------------TEAGIMTCVAISAAGSRGRGVLVTGSYDKAVRVMRNNAPPPHPSPLPGSSLSGGEAFPPVSMRVLGRHEDGVRSVAVSADGRWAVSGGREGTIKVWELTEEEDAPA---AAAVSGAAVAETSRAKACFQAHRGVVFSLCMSPDSRVL 207
            S S S+PA  VP   VVR+ ACGGT +PAPA+PMLRRVDV TA+ +GA +  AG   A        S+L         RD                          EAGIMTCVAISAAG+RGRG+LVTGSYDK VRV+ N   P   +P              V+MR+LGRHE+GVR+VA+SADGRWAV+G R+G +KVWE+  E    A    ++  GAA AE       F+AH+G V+SLCMSPD+R L
Sbjct:   17 SPSFSSPAPVVPP--VVRILACGGTFLPAPAKPMLRRVDVRTAAPAGAGADQAGGEEADVVSRPVRSDLCAAAAGRSERDGENXXXXXXXXXXXXXXRGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDRENPPXXXXXXXXXXXXXVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGLVKVWEVPRETPPGADREPSSPDGAAEAE-------FEAHKGYVYSLCMSPDARTL 259          
BLAST of mRNA_M-pyrifera_M_contig9799.22563.1 vs. uniprot
Match: A0A6H5L7H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H8_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.520e-49
Identity = 121/256 (47.27%), Postives = 148/256 (57.81%), Query Frame = 0
Query:    1 SSSPSAPAVPVPTPAVVRVFACGGTHIPAPARPMLRRVDVETASTS------GAVSANAGSHPASN--------------------------------------LRDTEAGIMTCVAISAAGSRGRGVLVTGSYDKAVRVMRNNAPPPHPSPLPGSSLSGGEAFPPVSMRVLGRHEDGVRSVAVSADGRWAVSGGREGTIKVWELTEEEDAPAAA-----AVSGAAVAETSRAKACFQAHRGVVFSLCMSPDSRVL 207
            SSS  AP VP    +VVR+ ACGGT +PAPA+PMLRRVDV TA+ +      G   A+  S PA +                                          EAGIMTCVAISAAG+RGRG+LVTGSYDK VRV+ N   P   +P P SS       PPV+MR+LGRHE+GVR+VA+SADGRWAV+G R+G +KVWE+  E  AP  A     +  GAA AE       F+AH+G V+SLCMSPD+R +
Sbjct:  216 SSSSPAPVVP----SVVRILACGGTFLPAPAKPMLRRVDVRTAAAAARADQAGGEEADVVSRPARSDLCAAAAGRSERNGENXXXXXXXXXXXXXXXDARGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDRENP-PSSSXXXXXXXPPVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGIVKVWEVPRE--APPGADREPLSSDGAAEAE-------FEAHKGYVYSLCMSPDARTV 457          
BLAST of mRNA_M-pyrifera_M_contig9799.22563.1 vs. uniprot
Match: A0A4Q2DKG4_9AGAR (Uncharacterized protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DKG4_9AGAR)

HSP 1 Score: 53.1 bits (126), Expect = 9.680e-5
Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 0
Query:   79 SRGRGVLVTGSYDKAVRV-----MRNNAPPPHPSPLPGSS----LSGGEA---FPPVSMRVLGRHEDGVRSVAVSADGRWAVSGGREGTIKVWELTEEEDAPAAAAVSGAAVAETSRAKACFQAHRGVVFSLCMSPDSRVL 207
            S+G  +LV+ S DK+V+V     +R +A  P  S LP SS    + GG       P  ++    HED + S AVS DG    SGGR+ ++++W+L +    PA+   + + V E   A    +AH   + S+  SP   +L
Sbjct:  418 SKGGQLLVSASLDKSVKVWDMEGLRKSALEPR-SNLPRSSRLPTVPGGTVSRDLKPRCVKEFVAHEDYILSAAVSHDGCLIASGGRDLSVRIWDLED----PASLNDNDSVVTERKAAYVLPEAHENTIISVDFSPSGNML 553          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9799.22563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LF89_ECTSI1.030e-4947.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7H8_9PHAE1.520e-4947.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q2DKG4_9AGAR9.680e-532.62Uncharacterized protein n=1 Tax=Candolleomyces abe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 121..160
e-value: 4.7E-7
score: 39.4
coord: 54..98
e-value: 140.0
score: 3.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 125..159
e-value: 1.1E-6
score: 29.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 128..169
score: 13.349
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 33..207
e-value: 1.0E-18
score: 69.3
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 69..206
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 69..206
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 128..169
score: 12.394
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 70..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9799contigM-pyrifera_M_contig9799:2227..2997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9799.22563.1mRNA_M-pyrifera_M_contig9799.22563.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9799 2227..2997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9799.22563.1 ID=prot_M-pyrifera_M_contig9799.22563.1|Name=mRNA_M-pyrifera_M_contig9799.22563.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
SSSPSAPAVPVPTPAVVRVFACGGTHIPAPARPMLRRVDVETASTSGAVS
ANAGSHPASNLRDTEAGIMTCVAISAAGSRGRGVLVTGSYDKAVRVMRNN
APPPHPSPLPGSSLSGGEAFPPVSMRVLGRHEDGVRSVAVSADGRWAVSG
GREGTIKVWELTEEEDAPAAAAVSGAAVAETSRAKACFQAHRGVVFSLCM
SPDSRVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf