prot_M-pyrifera_M_contig9739.22433.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9739.22433.1
Unique Nameprot_M-pyrifera_M_contig9739.22433.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
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BLAST of mRNA_M-pyrifera_M_contig9739.22433.1 vs. uniprot
Match: A0A6H5JHZ8_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.360e-13
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0 
Query:   21 RRVVSSLSTLCVKDLYVEPTELDCEGKHLFCHKCIYGVLSSEGCTNKCPVCNTKISNKRKSTIL 84
            + + + L+     DL+V+P ELDC+GKHL+CH CIY ++ +E C NKCP C T IS+  +  IL
Sbjct:  128 QEITTRLACPMCYDLFVDPIELDCKGKHLYCHSCIYDLVKNESCQNKCPTCMTSISSSTRKKIL 191
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BLAST of mRNA_M-pyrifera_M_contig9739.22433.1 vs. uniprot
Match: D7FQD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD6_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.770e-13
Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:   34 DLYVEPTELDCEGKHLFCHKCIYGVLSSEGCTNKCPVCNTKISNKRKSTIL 84
            DL+V+P ELDC+GKHL+CH CIY ++ +  C NKCP+C T IS+  +  IL
Sbjct:    4 DLFVDPIELDCKGKHLYCHSCIYDLVKNGSCQNKCPICMTSISSSTRKKIL 54
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9739.22433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHZ8_9PHAE1.360e-1346.88RING-type domain-containing protein (Fragment) n=1... [more]
D7FQD6_ECTSI2.770e-1354.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 22..86
e-value: 5.3E-9
score: 37.2
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 34..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9739contigM-pyrifera_M_contig9739:4513..4770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9739.22433.1mRNA_M-pyrifera_M_contig9739.22433.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9739 4513..4770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9739.22433.1 ID=prot_M-pyrifera_M_contig9739.22433.1|Name=mRNA_M-pyrifera_M_contig9739.22433.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
MLFFIAGVRRPQLIPLRAFFRRVVSSLSTLCVKDLYVEPTELDCEGKHLF
CHKCIYGVLSSEGCTNKCPVCNTKISNKRKSTILKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD