prot_M-pyrifera_M_contig96188.22168.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96188.22168.1
Unique Nameprot_M-pyrifera_M_contig96188.22168.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length184
Homology
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: UPI0014741807 (Ig-like domain repeat protein n=1 Tax=Actinomadura oligospora TaxID=111804 RepID=UPI0014741807)

HSP 1 Score: 102 bits (253), Expect = 5.040e-22
Identity = 72/174 (41.38%), Postives = 85/174 (48.85%), Query Frame = 0
Query:    3 WGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            WG N  GQLG G+     R  P  V  PA      MV QV AG +H +A+     +L WGR   GQLGDG    +  TP        VRLPT           TV   + GS H LA+ +D    R+LAWG N  G+LGVG  ANR  P  V +P   K T + AG   QSFAV
Sbjct:   78 WGRNDVGQLGDGT--STLRTTPVFVRLPAGV----MVTQVAAGGDHSLALTSDGRLLTWGRNTSGQLGDGTATARA-TPVF------VRLPTG---------VTVTRVSGGSYHSLALASD---GRVLAWGDNVFGELGVGGRANRETPVFVRMPKGTKATAIDAGRNSQSFAV 226          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A7K0CB25_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces smaragdinus TaxID=2585196 RepID=A0A7K0CB25_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 2.600e-21
Identity = 66/174 (37.93%), Postives = 88/174 (50.57%), Query Frame = 0
Query:    3 WGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            WG+N+YGQLG  ++ E+  A    V  P    P   V  + AG  H +A+     VLAWGR D GQLGDG       T    H+   V LP    +       T ++   G +H LA+T+D    R+L+WGWN +GQLG G   +R +P  V LP  +  T + AG G  S AV
Sbjct:  101 WGNNAYGQLGDNTVTERHTA--GYVDLP----PGVTVTAIAAGDQHSLALTSDGRVLAWGRNDLGQLGDG-------TTVERHLPVYVDLPPGVTV-------TAIAAGTGGQHSLALTSD---GRVLSWGWNAYGQLGDGTTTDRPDPEYVHLPDGVTITAIGAGEG-HSLAV 250          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: UPI0019C9834F (Uncharacterized protein n=2 Tax=Actinomadura sp. RB99 TaxID=2691577 RepID=UPI0019C9834F)

HSP 1 Score: 97.1 bits (240), Expect = 4.230e-20
Identity = 60/176 (34.09%), Postives = 86/176 (48.86%), Query Frame = 0
Query:    1 WTWGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            W WG+N  GQLG G+        P +V  PA +     V  +  G +H +A+     +LAWG  DFGQ+GDG    ++                +P  + L    T+ +   G+ H LAVT   S  R+LAWG+N+ GQLG+G+  +   P  V LP D++ T V AG    S A+
Sbjct:  105 WAWGENPNGQLGDGTTNRSH--VPVRVALPAGAT----VTAIATGDDHTLALTSTGRLLAWGYNDFGQIGDGSTTDRL----------------TPVAVDLPSGTTITAIGAGAGHSLAVT---SAGRVLAWGYNNTGQLGIGNNNDSSVPVQVPLPEDVRFTAV-AGGSAHSLAL 254          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A6J1SJR2_FRAOC (secretion-regulating guanine nucleotide exchange factor-like n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SJR2_FRAOC)

HSP 1 Score: 95.1 bits (235), Expect = 7.990e-20
Identity = 57/175 (32.57%), Postives = 87/175 (49.71%), Query Frame = 0
Query:    3 WGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIR-KPDVLAWGRGDFGQLGDGGREQKVP-TPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            WGDN +GQLG  S  +     P ++   A +        V+AGW H + +  K +V+ WGR  +GQL + GR + V   PT+  ++  ++                   AVGSEH + +T  E+GS +++WGWN+HG  GVG + N  EPT++      K   +  G    SFA+
Sbjct:  217 WGDNRFGQLGLDSTVQPVVYEPQELSLSALTGVKGDPSSVYAGWTHSVLLTDKGEVVNWGRNTYGQLSNNGRRRAVSWNPTLLSIDERIK-----------------QIAVGSEHNIILT--ETGS-IMSWGWNEHGNCGVGTQENVLEPTLIQAGLQNKANLIGTG-ACHSFAI 370          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A438M794_9ACTN (Alpha-tubulin suppressor-like RCC1 family protein n=1 Tax=Nonomuraea polychroma TaxID=46176 RepID=A0A438M794_9ACTN)

HSP 1 Score: 95.1 bits (235), Expect = 1.960e-19
Identity = 61/177 (34.46%), Postives = 85/177 (48.02%), Query Frame = 0
Query:    1 WTWGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKP-DVLAWGRGDFGQLGDGGR-EQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            W WG+N  GQLG G+        P +V  PA +     V  +  G +H +A+     +LAWG  DFGQ+GDG   ++  P P                 + L    T+ +   G+ H LAVT   S  R+L+WG+N+ GQLG+GD      P  V LP+D+  T V AG    S A+
Sbjct:  115 WAWGENLNGQLGDGTTNSSP--VPVRVALPAGTT----VTAIATGDDHTLALTSTGSLLAWGYNDFGQVGDGTTIDRNAPVP-----------------VALRAGTTITAIGAGAGHSLAVT---STGRVLSWGYNNTGQLGIGDTTGSSRPAEVPLPADVTITAV-AGGSAHSLAL 264          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A372JIR2_9ACTN (Cell wall anchor protein n=1 Tax=Actinomadura logoneensis TaxID=2293572 RepID=A0A372JIR2_9ACTN)

HSP 1 Score: 92.4 bits (228), Expect = 1.730e-18
Identity = 66/176 (37.50%), Postives = 82/176 (46.59%), Query Frame = 0
Query:    2 TWGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGRE-QKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            TWG N +GQLG  S        P   + PA +     V+QV  G+   +A+     V AWG    GQLGDG     +VP P        V LP            TV + A G +H LA+T   S  RLLAWG+ND GQ+G G   +R  P  V LP+    T + AG  G S AV
Sbjct:   42 TWGRNQFGQLGNDSTEHSN--VPVTALLPAGT----SVKQVSGGYGFSVALTSDGRVWAWGENPNGQLGDGTTNGSRVPVP--------VALPAG---------TTVTALATGDDHTLALT---STGRLLAWGYNDFGQVGDGSTTDRLAPVAVDLPNGTTITAIGAG-AGHSLAV 190          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A1S3JZ09_LINUN (secretion-regulating guanine nucleotide exchange factor isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JZ09_LINUN)

HSP 1 Score: 91.3 bits (225), Expect = 2.050e-18
Identity = 62/179 (34.64%), Postives = 81/179 (45.25%), Query Frame = 0
Query:    3 WGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKP-DVLAWGRGDFGQLG----DGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAVC 176
            WG N YGQ       + +   P  V  P     +  V QV++GW H +A+     V +WGR D+GQLG     G      PTP          + + P + QL           GSEH LA+TAD   S++L WGWN+HG  G GDE N   P  V      +   + AG  G S A+C
Sbjct:  222 WGCNKYGQCALDPHTQPQVNRPHCV--PQKVFRNKKVCQVYSGWTHLLAVTDDGQVFSWGRADYGQLGRPVQSGQLCDFTPTP----------IESIPQVSQL---------CCGSEHSLAITAD---SKVLTWGWNEHGICGTGDEINVMTPQTVKTLDTFRTVLIGAG-AGHSMALC 375          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: UPI000371A944 (Ig-like domain repeat protein n=1 Tax=Salinispora arenicola TaxID=168697 RepID=UPI000371A944)

HSP 1 Score: 91.7 bits (226), Expect = 2.780e-18
Identity = 69/174 (39.66%), Postives = 83/174 (47.70%), Query Frame = 0
Query:    3 WGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAV 175
            WG N+ GQLG G+      + P  V  PA +     V  V AG  H +A+     VLAWG  +FGQLGDG       T T +    +V LP            TV + A G  H +AVT   S   +LAWG+ND GQLG G   NR  P  V LP+    T V AG G  S AV
Sbjct:  169 WGANTDGQLGDGTTTSS--STPVAVDVPAGTT----VTAVAAGGAHSVAVTSAGTVLAWGNNNFGQLGDG-------TTTDSSTPVAVDLPAG---------TTVTAVAAGKFHSVAVT---SAGTVLAWGFNDSGQLGDGTTTNRSTPVAVDLPAGTTVTAVAAG-GFHSVAV 316          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A1G7BCI0_9ACTN (Alpha-tubulin suppressor n=1 Tax=Glycomyces harbinensis TaxID=58114 RepID=A0A1G7BCI0_9ACTN)

HSP 1 Score: 91.7 bits (226), Expect = 2.990e-18
Identity = 63/180 (35.00%), Postives = 81/180 (45.00%), Query Frame = 0
Query:    2 TWGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAGNGGQSFAVCMDEV 180
            +WG N YGQLG GSL       P  V  P  +     V  V  G+   IA+     VLAWG+ D GQLG+                 S    T P  ++L +  TV + +VG +H LA+T   S  ++LAWG+N+ GQLG G       P  V LPS    T + AG G         EV
Sbjct:   15 SWGRNQYGQLGNGSLNSAGEWVPGSVALPDGA----SVTAVGGGYGFSIALTSAGAVLAWGQNDVGQLGE----------------DSFTNSTEPVNVELPEGTTVTAISVGDDHVLALT---STGQVLAWGYNEWGQLGNGTNTESGLPVEVDLPSGTTVTAIAAGAGHSLALTSTGEV 171          
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Match: A0A7K0C9E3_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces smaragdinus TaxID=2585196 RepID=A0A7K0C9E3_9ACTN)

HSP 1 Score: 90.9 bits (224), Expect = 5.840e-18
Identity = 59/167 (35.33%), Postives = 81/167 (48.50%), Query Frame = 0
Query:    2 TWGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCIAIRKPD-VLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQLTQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEPTIVSLPSDLKPTQVFAG 167
            +WG N  G LG G+  +  R+ P  V  P    P   + Q  +G +H +A+     VLAWG   +GQ+GD     +  TP    M G+                T+   A G E  LA+T+D    R+LAWGWN HGQLG G   NR+ P  V +P+D+  T + AG
Sbjct:   39 SWGYNRSGSLGDGTTDQ--RSLPGNVDLP----PGVTITQFASGDSHSLALTTDGRVLAWGWNYYGQVGDDTTINRS-TPVEVDMQGA----------------TITEVAAGQEFSLALTSDH---RVLAWGWNGHGQLGDGTYINRHTPVEVHVPADVTVTHIDAG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96188.22168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00147418075.040e-2241.38Ig-like domain repeat protein n=1 Tax=Actinomadura... [more]
A0A7K0CB25_9ACTN2.600e-2137.93Uncharacterized protein n=1 Tax=Streptomyces smara... [more]
UPI0019C9834F4.230e-2034.09Uncharacterized protein n=2 Tax=Actinomadura sp. R... [more]
A0A6J1SJR2_FRAOC7.990e-2032.57secretion-regulating guanine nucleotide exchange f... [more]
A0A438M794_9ACTN1.960e-1934.46Alpha-tubulin suppressor-like RCC1 family protein ... [more]
A0A372JIR2_9ACTN1.730e-1837.50Cell wall anchor protein n=1 Tax=Actinomadura logo... [more]
A0A1S3JZ09_LINUN2.050e-1834.64secretion-regulating guanine nucleotide exchange f... [more]
UPI000371A9442.780e-1839.66Ig-like domain repeat protein n=1 Tax=Salinispora ... [more]
A0A1G7BCI0_9ACTN2.990e-1835.00Alpha-tubulin suppressor n=1 Tax=Glycomyces harbin... [more]
A0A7K0C9E3_9ACTN5.840e-1835.33Uncharacterized protein n=1 Tax=Streptomyces smara... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 127..168
e-value: 6.8E-11
score: 42.6
coord: 1..52
e-value: 2.1E-10
score: 41.1
coord: 57..119
e-value: 1.1E-7
score: 32.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 1..55
score: 12.052
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 126..178
score: 11.047
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 55..122
score: 12.514
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..87
e-value: 4.9E-17
score: 63.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 88..181
e-value: 1.1E-16
score: 62.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..168
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 1..79
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 39..167
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 1..79
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 39..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96188contigM-pyrifera_M_contig96188:2..608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96188.22168.1mRNA_M-pyrifera_M_contig96188.22168.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96188 2..608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96188.22168.1 ID=prot_M-pyrifera_M_contig96188.22168.1|Name=mRNA_M-pyrifera_M_contig96188.22168.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp
WTWGDNSYGQLGCGSLREKKRACPAKVVFPAASVPDSMVEQVFAGWNHCI
AIRKPDVLAWGRGDFGQLGDGGREQKVPTPTMAHMNGSVRLPTSPNILQL
TQPQTVVSFAVGSEHCLAVTADESGSRLLAWGWNDHGQLGVGDEANRYEP
TIVSLPSDLKPTQVFAGNGGQSFAVCMDEVAAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II