prot_M-pyrifera_M_contig94468.21807.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94468.21807.1
Unique Nameprot_M-pyrifera_M_contig94468.21807.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length156
Homology
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BLAST of mRNA_M-pyrifera_M_contig94468.21807.1 vs. uniprot
Match: A0A024TF71_9STRA (Fibronectin type-III domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TF71_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.970e-16
Identity = 54/135 (40.00%), Postives = 72/135 (53.33%), Query Frame = 0 
Query:   26 WESHVSPRKFDVRAELVASIPLTGMRPNRGKAENAARFRRRIVLFERGGNVPLSHKVRQAMEEGALAVVIFDNTGRCDNDK-----FNQACVPGSDISNDDGFAALDPIAAWKGLDRIPTLLISRASGESLLAKL 155
            W  H SP+ + V AE+VA+ P+   RP     EN  R R   +   R G +PL +KV  A   GALAVVI D  G CD+D      F+  C  GS+ +  +GF A D  A W  + RIP +L+ R    +LLA+L
Sbjct:  750 WPGHFSPKTYSVVAEIVAASPVLADRP----LENDVRDR---IALVRRGKLPLFNKVLHAQNAGALAVVIVDADGLCDDDSGTGGTFDHHCSVGSNHAFGEGFGAQDDAAVWSAI-RIPHVLLLRGDAAALLARL 876
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94468.21807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A024TF71_9STRA1.970e-1640.00Fibronectin type-III domain-containing protein n=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.30.30coord: 29..156
e-value: 2.3E-11
score: 45.3
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 63..155
IPR003137PA domainPFAMPF02225PAcoord: 38..151
e-value: 1.4E-6
score: 28.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94468contigM-pyrifera_M_contig94468:96..563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94468.21807.1mRNA_M-pyrifera_M_contig94468.21807.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94468 96..563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94468.21807.1 ID=prot_M-pyrifera_M_contig94468.21807.1|Name=mRNA_M-pyrifera_M_contig94468.21807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
PVAVVSDTLRRVSLLSESATVRVAGWESHVSPRKFDVRAELVASIPLTGM
RPNRGKAENAARFRRRIVLFERGGNVPLSHKVRQAMEEGALAVVIFDNTG
RCDNDKFNQACVPGSDISNDDGFAALDPIAAWKGLDRIPTLLISRASGES
LLAKLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003137PA_domain