prot_M-pyrifera_M_contig90970.21090.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90970.21090.1
Unique Nameprot_M-pyrifera_M_contig90970.21090.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: A0A383WLA8_TETOB (UBC core domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WLA8_TETOB)

HSP 1 Score: 135 bits (341), Expect = 6.000e-39
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPNGEAHP 96
            VPRNFRLLEELE+GEKG  GDGT+SYG+ED+ DM+M NW GTI+GP+NT  +GRIY+LK  C   YP RPP VRF S+INMDCV P+G   P
Sbjct:    5 VPRNFRLLEELEKGEKG-IGDGTVSYGMEDADDMLMRNWTGTIIGPSNTVHDGRIYTLKFHCDLNYPARPPLVRFQSKINMDCVLPDGRVDP 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: A0A6J1HM74_CUCMO (ubiquitin-conjugating enzyme E2 variant 1B isoform X1 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1HM74_CUCMO)

HSP 1 Score: 136 bits (342), Expect = 7.700e-39
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPN-GEAHPPLLPLFS 103
            VPRNFRLLEELE GEKG  GDGT+SYG++D+ D+ M +W GTI+GP NT  EGRIY LKL CGQ+YP  PP+VRF +RINM CV P  G   P L P+ S
Sbjct:   10 VPRNFRLLEELERGEKG-IGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLS 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: F4I6V4_ARATH (MMS ZWEI homologue 2 n=11 Tax=Brassicaceae TaxID=3700 RepID=F4I6V4_ARATH)

HSP 1 Score: 135 bits (341), Expect = 7.870e-39
Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGP-NGEAHPPLLPLFS 103
            VPRNFRLLEELE GEKG  GDGT+SYG++D+ D++M +W GTILGP NT++EG+I+ LKL CG++YP+ PP VRF SRINM CV P NG   P   P+ S
Sbjct:   10 VPRNFRLLEELERGEKG-IGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLS 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: A0A6J1JNZ0_CUCMA (ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JNZ0_CUCMA)

HSP 1 Score: 136 bits (342), Expect = 9.200e-39
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPN-GEAHPPLLPLFS 103
            VPRNFRLLEELE GEKG  GDGT+SYG++D+ D+ M +W GTI+GP NT  EGRIY LKL CGQ+YP  PP+VRF +RINM CV P  G   P L P+ S
Sbjct:   10 VPRNFRLLEELERGEKG-IGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLS 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B n=2 Tax=Arabidopsis thaliana TaxID=3702 RepID=UEV1B_ARATH)

HSP 1 Score: 135 bits (341), Expect = 1.090e-38
Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGP-NGEAHPPLLPLFS 103
            VPRNFRLLEELE GEKG  GDGT+SYG++D+ D++M +W GTILGP NT++EG+I+ LKL CG++YP+ PP VRF SRINM CV P NG   P   P+ S
Sbjct:   10 VPRNFRLLEELERGEKG-IGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLS 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A n=33 Tax=Brassicaceae TaxID=3700 RepID=UEV1A_ARATH)

HSP 1 Score: 134 bits (338), Expect = 3.030e-38
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPN-GEAHPPLLPLFS 103
            VPRNFRLLEELE GEKG  GDGT+SYG++D+ D+ M +W GTILGP NT++EG+I+ LKL CG+EYP+ PP VRF +RINM CV P  G   P L P+ +
Sbjct:   10 VPRNFRLLEELERGEKG-IGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLT 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: A0A835JSZ1_9ROSI (UBC core domain-containing protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835JSZ1_9ROSI)

HSP 1 Score: 138 bits (348), Expect = 3.460e-38
Identity = 65/104 (62.50%), Postives = 78/104 (75.00%), Query Frame = 0 
Query:    1 VGGAVPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGP-NGEAHPPLLPLFS 103
            V  AVPRNFRLLEELE GEKG  GDGT+SYG++D+ D+ M +W GTI+GP NT  EGRIY LKL CG++YP  PP+VRF +RINM CV P NG   P L P+ +
Sbjct:   10 VSTAVPRNFRLLEELERGEKG-IGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNPENGVVEPSLFPMLA 112
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: A0BDP7_PARTE (UBC core domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BDP7_PARTE)

HSP 1 Score: 133 bits (335), Expect = 5.050e-38
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPNGE 93
            VPR FRLLEEL+ GEKG  GDGT+SYGLED+ DM MTNW GTILGP NTSFE RIYSLK+TCG +YPK  P V+F ++IN+ CV  NG+
Sbjct:    7 VPRRFRLLEELQNGEKG-IGDGTVSYGLEDAEDMQMTNWNGTILGPYNTSFENRIYSLKITCGPQYPKVAPQVKFVTKINLPCVQANGQ 94
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: A0A3P6CAV3_BRACM (UBC core domain-containing protein n=4 Tax=Brassica TaxID=3705 RepID=A0A3P6CAV3_BRACM)

HSP 1 Score: 134 bits (337), Expect = 5.930e-38
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPN-GEAHPPLLPLFS 103
            VPRNFRLLEELE GEKG  GDGT+SYG++D+ D+ M +W GTILGP NT++EG+I+ LKL CG+EYP+ PP VRF +RINM CV P  G   P L P+ +
Sbjct:   10 VPRNFRLLEELERGEKG-IGDGTVSYGMDDADDIYMQSWTGTILGPHNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLA 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Match: UPI001C7C3396 (Ubiquitin-conjugating enzyme spm2 n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7C3396)

HSP 1 Score: 133 bits (334), Expect = 6.750e-38
Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = 0 
Query:    5 VPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGPANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGP-NGEAHPPLLPLFS 103
            VPRNFRLLEELE+GEKG  GDG+ SYGLED  D+MM+NW GTI+GP +T  E RIYSLK+TCG  YP  PP V+F SR+N+ CV   NGE  P  LP+ +
Sbjct:    4 VPRNFRLLEELEKGEKG-IGDGSCSYGLEDGDDIMMSNWTGTIIGPGHTVHENRIYSLKITCGDNYPDAPPKVKFLSRVNLPCVNQTNGEVDPQKLPVLN 102
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90970.21090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A383WLA8_TETOB6.000e-3967.39UBC core domain-containing protein n=2 Tax=Scenede... [more]
A0A6J1HM74_CUCMO7.700e-3964.00ubiquitin-conjugating enzyme E2 variant 1B isoform... [more]
F4I6V4_ARATH7.870e-3963.00MMS ZWEI homologue 2 n=11 Tax=Brassicaceae TaxID=3... [more]
A0A6J1JNZ0_CUCMA9.200e-3964.00ubiquitin-conjugating enzyme E2 variant 1A-like is... [more]
UEV1B_ARATH1.090e-3863.00Ubiquitin-conjugating enzyme E2 variant 1B n=2 Tax... [more]
UEV1A_ARATH3.030e-3862.00Ubiquitin-conjugating enzyme E2 variant 1A n=33 Ta... [more]
A0A835JSZ1_9ROSI3.460e-3862.50UBC core domain-containing protein n=1 Tax=Salix d... [more]
A0BDP7_PARTE5.050e-3869.66UBC core domain-containing protein n=2 Tax=Paramec... [more]
A0A3P6CAV3_BRACM5.930e-3862.00UBC core domain-containing protein n=4 Tax=Brassic... [more]
UPI001C7C33966.750e-3863.00Ubiquitin-conjugating enzyme spm2 n=1 Tax=Marasmiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 23..84
e-value: 5.5E-11
score: 42.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 9..93
score: 13.75
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..103
e-value: 3.4E-39
score: 135.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..100
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 3..100
NoneNo IPR availablePANTHERPTHR24068:SF237coord: 3..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90970contigM-pyrifera_M_contig90970:197..517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90970.21090.1mRNA_M-pyrifera_M_contig90970.21090.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90970 197..517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90970.21090.1 ID=prot_M-pyrifera_M_contig90970.21090.1|Name=mRNA_M-pyrifera_M_contig90970.21090.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
VGGAVPRNFRLLEELEEGEKGQAGDGTISYGLEDSGDMMMTNWIGTILGP
ANTSFEGRIYSLKLTCGQEYPKRPPAVRFASRINMDCVGPNGEAHPPLLP
LFSPLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD