prot_M-pyrifera_M_contig9093.21083.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9093.21083.1
Unique Nameprot_M-pyrifera_M_contig9093.21083.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length287
Homology
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BLAST of mRNA_M-pyrifera_M_contig9093.21083.1 vs. uniprot
Match: A0A6H5L1S0_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1S0_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 6.810e-26
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 0 
Query:  222 LEDPPEDDSPDKTSVRFQFPTGARVLRKFRKNSDVRQLFLFVRSELGGAETKSFDVRTVRPPTSVR 287
            LEDPP DD  +K SVRFQFPTGARVLRKFRK+SDVRQLFLFVR+EL GA+ K FDVRTVRPP SVR
Sbjct:   19 LEDPPGDDCAEKISVRFQFPTGARVLRKFRKSSDVRQLFLFVRTELEGAKAKPFDVRTVRPPCSVR 84
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BLAST of mRNA_M-pyrifera_M_contig9093.21083.1 vs. uniprot
Match: D7FS95_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS95_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 3.030e-22
Identity = 53/66 (80.30%), Postives = 58/66 (87.88%), Query Frame = 0 
Query:  222 LEDPPEDDSPDKTSVRFQFPTGARVLRKFRKNSDVRQLFLFVRSELGGAETKSFDVRTVRPPTSVR 287
            LEDPP DD  +K SVRFQFPTGARVLR+FRK+SDVRQLFLFVR+EL GA+ K FDVRTVRPP SVR
Sbjct:  521 LEDPPGDDCAEKISVRFQFPTGARVLRRFRKSSDVRQLFLFVRTELEGAKAKPFDVRTVRPPCSVR 586
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9093.21083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1S0_9PHAE6.810e-2681.82UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FS95_ECTSI3.030e-2280.30UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..92
NoneNo IPR availableGENE3D3.10.20.90coord: 170..287
e-value: 4.4E-7
score: 32.1
IPR001012UBX domainPFAMPF00789UBXcoord: 231..279
e-value: 4.5E-5
score: 23.6
IPR001012UBX domainPROSITEPS50033UBXcoord: 229..287
score: 13.167
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 219..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9093contigM-pyrifera_M_contig9093:77..2098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9093.21083.1mRNA_M-pyrifera_M_contig9093.21083.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9093 77..2098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9093.21083.1 ID=prot_M-pyrifera_M_contig9093.21083.1|Name=mRNA_M-pyrifera_M_contig9093.21083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
QLPPSTGGSEDQMLAAAIAASLDTNSRDGPEESRSDAGGGGSRGSSGSDN
SSSLGAGGVAGVALPTITVDDSDQEDEDFEEEEEEEEEEEEDSSASAAAA
LATAAAAAAAVKGKGKGKGKAWVAGRTVASYSAAGGAAASSASSSGGRVV
MDTGFIPTEGGTAGEVVDVTEEVGEEGRRAVDVSDENGAARSDSQDRSME
KSAGNGCAAAAAGGAEGAGEVLEDPPEDDSPDKTSVRFQFPTGARVLRKF
RKNSDVRQLFLFVRSELGGAETKSFDVRTVRPPTSVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-like_domsf