prot_M-pyrifera_M_contig90183.20901.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90183.20901.1
Unique Nameprot_M-pyrifera_M_contig90183.20901.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI00201EEDF0 (tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EEDF0)

HSP 1 Score: 94.0 bits (232), Expect = 6.490e-20
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 115
            +AY +YR   W  ++GLK+G DF++Y + GP  +H  Y+V ++ V E  L+  +G T R  S+  L  L+R+TE VAK L++C V++P  ++   L  SPAC+P FKV E  V+R
Sbjct:  478 IAYHYYRSKGWVPKTGLKFGCDFIVY-KEGPPFYHGSYSVLVRLVDEETLTEHLGSTHRPLSWISLAGLNRITEHVAKELLICYVIKPRGVTEESLM-SPACIPQFKVQEVLVSR 590
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BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI001B888EA2 (tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B888EA2)

HSP 1 Score: 89.7 bits (221), Expect = 6.040e-19
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 115
            +AY H+R   W  +SGLK+G DF+LY R GP  +H  Y+V ++ V E  L  +    +R  S+  L  L+R+TE VAK L++C V++P  ++   LA SP C+  F V E  V+R
Sbjct:  197 IAYHHFRSKGWVPKSGLKFGCDFILY-REGPPFYHGSYSVVVRLVDEQTLQDSTYHNTRCLSWTSLSGLNRITEHVAKELLICYVIKPRDITPERLA-SPKCILDFSVQEVHVSR 309
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BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A210PQS6_MIZYE (tRNA-intron lyase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PQS6_MIZYE)

HSP 1 Score: 90.5 bits (223), Expect = 1.060e-18
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTA---IGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVARLDPCKVR 122
            V Y ++R   W  +SGLK+GTDF+LY + GP  +H  Y+V ++ ++E +++      G   R  S+  L  L+RVTEQVAK L++C V+RP+ L+  EL  SP CL  FKV +  V R  P + R
Sbjct:  452 VVYHYFRSLGWVPKSGLKFGTDFILY-KVGPPFYHGSYSVVVKTINEEEVNAVPEVTGVEGRDFSWISLAGLNRVTEQVAKELMLCYVIRPSDLTTEELK-SPKCLSRFKVQQITVNRWIPSQER 574
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A7S4HZE8_9EUKA (tRNA-splicing endonuclease subunit Sen2 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HZE8_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 4.760e-18
Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 0 
Query:    2 AYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAA-SPACLPAFKVYETRVARLDPCKVR 122
            AYC YR   W VR GLKYG DFVLY + GPS+ H +  V +Q V  ++ + ++    RF     +QALSR+TE V+KGL++C V    ++   + +   P+ +    + +  + R DP KVR
Sbjct:  137 AYCQYRSMGWIVRGGLKYGVDFVLYSKGGPSQTHGELTVSVQFVHSAENAASLT-IERFGKLTDIQALSRITETVSKGLLLCFVYTKENIETNDQSLLHPSIMDKIHIKDFILRRWDPTKVR 257
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A3Q2YER6_HIPCM (tRNA-intron lyase n=2 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YER6_HIPCM)

HSP 1 Score: 86.3 bits (212), Expect = 6.980e-18
Identity = 56/124 (45.16%), Postives = 71/124 (57.26%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVR--SGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVARLDPCKVR 122
             AY H+R   W  +  SG KYG D +LY R GP  +HA Y+V ++ V E       G T R  S+R L ALSR+T  V+K L++C V+ PA LS AEL  SPACL   KV +  V+R    K R
Sbjct:  160 AAYHHFRSRGWVPKGGSGAKYGVDMLLY-RKGPPFYHASYSVVVEKVDE----RFEGSTLRPFSWRSLAALSRITANVSKELLLCYVIHPADLSEAELD-SPACLSKLKVQDVMVSRWVSSKER 277
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A087U425_STEMI (tRNA-intron lyase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087U425_STEMI)

HSP 1 Score: 86.3 bits (212), Expect = 1.540e-17
Identity = 46/122 (37.70%), Postives = 72/122 (59.02%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVARLDPCKVR 122
             AY H+R   W VRSGLKYGTD+VLY + GP  +H+ Y+V ++ V E +   A  G     ++  L AL+R+T    KGL++  V++P+ LS  +++ +P C+  +K+ E    R  P + R
Sbjct:  227 TAYHHFRSKGWVVRSGLKYGTDYVLY-KDGPPFYHSTYSVVVKPVKEQNFRDAYAGGKPHFTWSSLAALNRITTNAGKGLLLLYVIKPSALSENKVS-TPYCISQYKLEEVLFKRWVPSETR 346
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BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: L8GUV9_ACACA (tRNA-intron lyase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUV9_ACACA)

HSP 1 Score: 86.3 bits (212), Expect = 2.960e-17
Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNV 85
             AY HYR+ NW V+SG+KYGTDFVLY R GP+ +HA+++V +QA  E  +        R  S+R L  L+R++EQVAKGL++C+V
Sbjct:  372 AAYRHYRQHNWVVKSGIKYGTDFVLYRR-GPAHYHAEWSVVVQASGEGVVCGQWSAGGRQLSWRNLATLNRLSEQVAKGLLLCSV 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI001EE5C6C3 (LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5C6C3)

HSP 1 Score: 86.3 bits (212), Expect = 3.270e-17
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 115
            +AY +YR   W  ++GLK+G DF++Y + GP  +H  Y+V ++ V E  L      T R  S+  L  L+R+TE VAK L++C V++P  +S   L  SPAC+P FKV E  V R
Sbjct:  492 IAYHYYRSKGWVPKTGLKFGCDFIVY-KEGPPFYHGSYSVLVRLVDEETLIEHPEYTHRPLSWISLAGLNRITEHVAKELLMCYVIKPRGVSEESLM-SPACIPQFKVQEILVTR 604
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A8C4A8U1_9TELE (tRNA-splicing endonuclease subunit Sen2 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4A8U1_9TELE)

HSP 1 Score: 85.9 bits (211), Expect = 3.780e-17
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 115
             AY ++R   W  ++G+KYGTDF+LY R GP  +HA Y+V ++ V++S      G T R  S+R L ALSR+T  V+K L+VC V+ P  ++  EL +SP C+  F+V E  V+R
Sbjct:  336 AAYHYFRSKGWVPKTGVKYGTDFMLY-RKGPPFYHASYSVVVEQVNDSFQ----GATLRPFSWRSLAALSRITGNVSKELMVCFVITPLDVTE-ELLSSPDCIKRFRVQEMIVSR 444
[Close]
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI0015FAC86E (tRNA-splicing endonuclease subunit Sen2 n=1 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015FAC86E)

HSP 1 Score: 80.1 bits (196), Expect = 2.850e-16
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0 
Query:    1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 115
            +AY ++R   W  + G+KYGTD +LY R GP  +HA Y+V ++ V +       GG  R  S+R L ALSR+T  V+K L++C V+ P+HL+   L+ SP CL    V E  ++R
Sbjct:   65 MAYHYFRSRGWVPKPGVKYGTDLMLY-RKGPPFYHASYSVVVEKVDQ----PGRGGALRPFSWRSLAALSRITGNVSKDLMLCYVIYPSHLTEEHLS-SPDCLCMVTVQEIILSR 173
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00201EEDF06.490e-2041.74tRNA-splicing endonuclease subunit Sen2-like n=1 T... [more]
UPI001B888EA26.040e-1940.87tRNA-splicing endonuclease subunit Sen2-like n=1 T... [more]
A0A210PQS6_MIZYE1.060e-1841.60tRNA-intron lyase n=1 Tax=Mizuhopecten yessoensis ... [more]
A0A7S4HZE8_9EUKA4.760e-1838.52tRNA-splicing endonuclease subunit Sen2 n=1 Tax=Va... [more]
A0A3Q2YER6_HIPCM6.980e-1845.16tRNA-intron lyase n=2 Tax=Hippocampus comes TaxID=... [more]
A0A087U425_STEMI1.540e-1737.70tRNA-intron lyase (Fragment) n=1 Tax=Stegodyphus m... [more]
L8GUV9_ACACA2.960e-1750.59tRNA-intron lyase n=1 Tax=Acanthamoeba castellanii... [more]
UPI001EE5C6C33.270e-1741.74LOW QUALITY PROTEIN: tRNA-splicing endonuclease su... [more]
A0A8C4A8U1_9TELE3.780e-1743.48tRNA-splicing endonuclease subunit Sen2 n=2 Tax=De... [more]
UPI0015FAC86E2.850e-1640.87tRNA-splicing endonuclease subunit Sen2 n=1 Tax=On... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011856tRNA endonuclease-like domain superfamilyGENE3D3.40.1350.10coord: 1..99
e-value: 1.9E-19
score: 71.5
IPR006677tRNA intron endonuclease, catalytic domain-likePFAMPF01974tRNA_int_endocoord: 2..85
e-value: 1.2E-14
score: 54.1
IPR006676tRNA-splicing endonucleasePANTHERPTHR21227TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2coord: 1..117
NoneNo IPR availablePANTHERPTHR21227:SF0TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2coord: 1..117
IPR036167tRNA intron endonuclease, catalytic domain-like superfamilySUPERFAMILY53032tRNA-intron endonuclease catalytic domain-likecoord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90183contigM-pyrifera_M_contig90183:3..371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90183.20901.1mRNA_M-pyrifera_M_contig90183.20901.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90183 3..371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90183.20901.1 ID=prot_M-pyrifera_M_contig90183.20901.1|Name=mRNA_M-pyrifera_M_contig90183.20901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDL
STAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASP
ACLPAFKVYETRVARLDPCKVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011856tRNA_endonuc-like_dom_sf
IPR006677tRNA_intron_Endonuc_cat-like
IPR006676tRNA_splic
IPR036167tRNA_intron_Endo_cat-like_sf