mRNA_M-pyrifera_M_contig90183.20901.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI00201EEDF0 (tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EEDF0) HSP 1 Score: 94.0 bits (232), Expect = 6.490e-20 Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 345 +AY +YR W ++GLK+G DF++Y + GP +H Y+V ++ V E L+ +G T R S+ L L+R+TE VAK L++C V++P ++ L SPAC+P FKV E V+R Sbjct: 478 IAYHYYRSKGWVPKTGLKFGCDFIVY-KEGPPFYHGSYSVLVRLVDEETLTEHLGSTHRPLSWISLAGLNRITEHVAKELLICYVIKPRGVTEESLM-SPACIPQFKVQEVLVSR 590
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI001B888EA2 (tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B888EA2) HSP 1 Score: 89.7 bits (221), Expect = 6.040e-19 Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 345 +AY H+R W +SGLK+G DF+LY R GP +H Y+V ++ V E L + +R S+ L L+R+TE VAK L++C V++P ++ LA SP C+ F V E V+R Sbjct: 197 IAYHHFRSKGWVPKSGLKFGCDFILY-REGPPFYHGSYSVVVRLVDEQTLQDSTYHNTRCLSWTSLSGLNRITEHVAKELLICYVIKPRDITPERLA-SPKCILDFSVQEVHVSR 309
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A210PQS6_MIZYE (tRNA-intron lyase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PQS6_MIZYE) HSP 1 Score: 90.5 bits (223), Expect = 1.060e-18 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTA---IGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVARLDPCKVR 366 V Y ++R W +SGLK+GTDF+LY + GP +H Y+V ++ ++E +++ G R S+ L L+RVTEQVAK L++C V+RP+ L+ EL SP CL FKV + V R P + R Sbjct: 452 VVYHYFRSLGWVPKSGLKFGTDFILY-KVGPPFYHGSYSVVVKTINEEEVNAVPEVTGVEGRDFSWISLAGLNRVTEQVAKELMLCYVIRPSDLTTEELK-SPKCLSRFKVQQITVNRWIPSQER 574
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A7S4HZE8_9EUKA (tRNA-splicing endonuclease subunit Sen2 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HZE8_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 4.760e-18 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 4 AYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAA-SPACLPAFKVYETRVARLDPCKVR 366 AYC YR W VR GLKYG DFVLY + GPS+ H + V +Q V ++ + ++ RF +QALSR+TE V+KGL++C V ++ + + P+ + + + + R DP KVR Sbjct: 137 AYCQYRSMGWIVRGGLKYGVDFVLYSKGGPSQTHGELTVSVQFVHSAENAASLT-IERFGKLTDIQALSRITETVSKGLLLCFVYTKENIETNDQSLLHPSIMDKIHIKDFILRRWDPTKVR 257
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A3Q2YER6_HIPCM (tRNA-intron lyase n=2 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YER6_HIPCM) HSP 1 Score: 86.3 bits (212), Expect = 6.980e-18 Identity = 56/124 (45.16%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 1 VAYCHYRRANWTVR--SGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVARLDPCKVR 366 AY H+R W + SG KYG D +LY R GP +HA Y+V ++ V E G T R S+R L ALSR+T V+K L++C V+ PA LS AEL SPACL KV + V+R K R Sbjct: 160 AAYHHFRSRGWVPKGGSGAKYGVDMLLY-RKGPPFYHASYSVVVEKVDE----RFEGSTLRPFSWRSLAALSRITANVSKELLLCYVIHPADLSEAELD-SPACLSKLKVQDVMVSRWVSSKER 277
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A087U425_STEMI (tRNA-intron lyase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087U425_STEMI) HSP 1 Score: 86.3 bits (212), Expect = 1.540e-17 Identity = 46/122 (37.70%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVARLDPCKVR 366 AY H+R W VRSGLKYGTD+VLY + GP +H+ Y+V ++ V E + A G ++ L AL+R+T KGL++ V++P+ LS +++ +P C+ +K+ E R P + R Sbjct: 227 TAYHHFRSKGWVVRSGLKYGTDYVLY-KDGPPFYHSTYSVVVKPVKEQNFRDAYAGGKPHFTWSSLAALNRITTNAGKGLLLLYVIKPSALSENKVS-TPYCISQYKLEEVLFKRWVPSETR 346
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: L8GUV9_ACACA (tRNA-intron lyase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUV9_ACACA) HSP 1 Score: 86.3 bits (212), Expect = 2.960e-17 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNV 255 AY HYR+ NW V+SG+KYGTDFVLY R GP+ +HA+++V +QA E + R S+R L L+R++EQVAKGL++C+V Sbjct: 372 AAYRHYRQHNWVVKSGIKYGTDFVLYRR-GPAHYHAEWSVVVQASGEGVVCGQWSAGGRQLSWRNLATLNRLSEQVAKGLLLCSV 455
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI001EE5C6C3 (LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5C6C3) HSP 1 Score: 86.3 bits (212), Expect = 3.270e-17 Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 345 +AY +YR W ++GLK+G DF++Y + GP +H Y+V ++ V E L T R S+ L L+R+TE VAK L++C V++P +S L SPAC+P FKV E V R Sbjct: 492 IAYHYYRSKGWVPKTGLKFGCDFIVY-KEGPPFYHGSYSVLVRLVDEETLIEHPEYTHRPLSWISLAGLNRITEHVAKELLMCYVIKPRGVSEESLM-SPACIPQFKVQEILVTR 604
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: A0A8C4A8U1_9TELE (tRNA-splicing endonuclease subunit Sen2 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4A8U1_9TELE) HSP 1 Score: 85.9 bits (211), Expect = 3.780e-17 Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 345 AY ++R W ++G+KYGTDF+LY R GP +HA Y+V ++ V++S G T R S+R L ALSR+T V+K L+VC V+ P ++ EL +SP C+ F+V E V+R Sbjct: 336 AAYHYFRSKGWVPKTGVKYGTDFMLY-RKGPPFYHASYSVVVEQVNDSFQ----GATLRPFSWRSLAALSRITGNVSKELMVCFVITPLDVTE-ELLSSPDCIKRFRVQEMIVSR 444
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Match: UPI0015FAC86E (tRNA-splicing endonuclease subunit Sen2 n=1 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015FAC86E) HSP 1 Score: 80.1 bits (196), Expect = 2.850e-16 Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 1 VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLSTAIGGTSRFSSFRCLQALSRVTEQVAKGLVVCNVVRPAHLSAAELAASPACLPAFKVYETRVAR 345 +AY ++R W + G+KYGTD +LY R GP +HA Y+V ++ V + GG R S+R L ALSR+T V+K L++C V+ P+HL+ L+ SP CL V E ++R Sbjct: 65 MAYHYFRSRGWVPKPGVKYGTDLMLY-RKGPPFYHASYSVVVEKVDQ----PGRGGALRPFSWRSLAALSRITGNVSKDLMLCYVIYPSHLTEEHLS-SPDCLCMVTVQEIILSR 173 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90183.20901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90183.20901.1 >prot_M-pyrifera_M_contig90183.20901.1 ID=prot_M-pyrifera_M_contig90183.20901.1|Name=mRNA_M-pyrifera_M_contig90183.20901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp VAYCHYRRANWTVRSGLKYGTDFVLYHRSGPSRFHAQYAVCLQAVSESDLback to top mRNA from alignment at M-pyrifera_M_contig90183:3..371+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90183.20901.1 ID=mRNA_M-pyrifera_M_contig90183.20901.1|Name=mRNA_M-pyrifera_M_contig90183.20901.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig90183:3..371+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90183:3..371+ >mRNA_M-pyrifera_M_contig90183.20901.1 ID=mRNA_M-pyrifera_M_contig90183.20901.1|Name=mRNA_M-pyrifera_M_contig90183.20901.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig90183:3..371+ (Macrocystis pyrifera P11B4 male)back to top |