prot_M-pyrifera_M_contig89767.20807.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig89767.20807.1
Unique Name	prot_M-pyrifera_M_contig89767.20807.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	182

Homology

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0L0S8W1_ALLM3 (Valine--tRNA ligase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S8W1_ALLM3)

HSP 1 Score: 221 bits (563), Expect = 4.630e-68
Identity = 96/180 (53.33%), Postives = 131/180 (72.78%), Query Frame = 0

Query:    2 PPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEKVQVGTMDYFRYEI 181
            PPPNVTG LH GHA+  A+QDA+ R+H   GK+V W+PG DHAGIATQ+VVE++L   EG+TRH+LGR+ FL RVW W+ A+G  I+ QL+ +GA+ +W   YFTLD  RSR V +AF+ L  + L++R T++VHWCP L+TA++D+EV+ L I   + +  P+G   QVG M YFRY +
Sbjct:   55 PPPNVTGRLHCGHALTTAIQDAIARYHHMHGKSVRWIPGTDHAGIATQTVVEKQLAKTEGKTRHELGRDAFLSRVWSWKDAHGDHIHHQLRALGASFSWSDAYFTLDTPRSRIVTDAFLELSRRGLIYRATRLVHWCPALETAISDMEVEYLTIDGPTAVPTPSGHSAQVGEMHYFRYPV 234

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: G4ZE43_PHYSP (Valine--tRNA ligase n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZE43_PHYSP)

HSP 1 Score: 231 bits (590), Expect = 9.410e-68
Identity = 110/182 (60.44%), Postives = 140/182 (76.92%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 181
            LPPPNVTGALHLGHA+ V +QDA+ RWHR RG  V W+PGLDHAGIATQSVVER+L  E+G +RHDLGRE F+ +VW W   YGGRI  Q+  +GA +  ++ YFTLDE+RSRAVV+AFV+LHEK L++R  +MV+WCP LQTA++D+EVD  ++ K +   LP  EK V+ G M  F+Y+I
Sbjct:    3 LPPPNVTGALHLGHALTVTIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLLKEKGLSRHDLGREAFVQQVWAWNEQYGGRIMSQIDHLGAIVKKDQPYFTLDEQRSRAVVDAFVKLHEKGLVYRRRRMVNWCPTLQTAISDIEVDLEQLEKPTKKMLPGREKAVEFGVMHRFKYQI 184

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A7J7IPL4_9RHOD (Valine--tRNA ligase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPL4_9RHOD)

HSP 1 Score: 221 bits (564), Expect = 4.210e-67
Identity = 102/183 (55.74%), Postives = 139/183 (75.96%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGE-KVQVGTMDYFRYEIK 182
            +PPPNVTG LHLGH +M A+QD L RWHR +G   LWVPG DHAGIATQ+VVER+L  E   TRHDLGRE F+  VW ++  YGGRI +QL+++GA++ W +E FT++EK SRAVVEAFVRLHE+ L++RGT++V+WC  L+TAL+D+EV+ ++I  +    +P  E +V+VG +  F Y ++
Sbjct:  164 MPPPNVTGTLHLGHTLMCAIQDCLTRWHRMKGHVTLWVPGTDHAGIATQTVVERKLMKERKLTRHDLGREDFVQYVWSYKREYGGRICDQLRRLGASVDWSREQFTMNEKLSRAVVEAFVRLHERGLIYRGTRLVNWCCRLRTALSDIEVEYVDIPGRELRRVPGHEAEVEVGVLTQFAYPLE 346

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: W2Q1L0_PHYPN (Valine--tRNA ligase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q1L0_PHYPN)

HSP 1 Score: 221 bits (564), Expect = 4.310e-67
Identity = 102/182 (56.04%), Postives = 139/182 (76.37%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 181
            LPPPNVTGALH+GHA+ + +QDA+ RWHR RG  V W+PGLDHAGIATQSVVER+L  E+G +R+DLGRE F+ +VW+W   YGGRI  Q+  +GA +  ++ YFTLD++RS AV+ AFV L+EK L++R  +MV+WCP LQTA++D+EVD+ ++ K +   LP  +K V+ G M  F+Y+I
Sbjct:  104 LPPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKEQGLSRYDLGREAFVDQVWQWNEQYGGRIMNQIDHLGAIVKKDQPYFTLDKQRSEAVINAFVTLYEKGLVYRKRRMVNWCPTLQTAISDIEVDSEQLEKATKKMLPGRDKPVEFGVMHRFKYQI 285

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0P1AAC4_PLAHL (Valine--tRNA ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAC4_PLAHL)

HSP 1 Score: 230 bits (587), Expect = 6.300e-67
Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEKV-QVGTMDYFRYEI 181
            LPPPN+TGALH+GHA+ + +QDA+ RWHR RG  V W+PGLDHAGIATQSVVER+L  E+G +RH++GRE F+ RVW+W   YGG+I  Q+ ++GA +  ++ YFTLD +RS+AVV AFV+LHEK LL+RG +MV+WCP LQTA++D+EVD   + K +   LP G KV + G M  F+Y+I
Sbjct:   98 LPPPNITGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLMKEQGLSRHEIGREAFVDRVWQWNEQYGGKIMNQIDRLGAIVKKDQPYFTLDTERSKAVVTAFVKLHEKGLLYRGRRMVNWCPMLQTAISDIEVDLEPLDKATKKVLPGGHKVVEFGVMYRFKYQI 279

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0W8CTI7_PHYNI (Valine--tRNA ligase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CTI7_PHYNI)

HSP 1 Score: 221 bits (564), Expect = 7.490e-67
Identity = 102/182 (56.04%), Postives = 139/182 (76.37%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 181
            LPPPNVTGALH+GHA+ + +QDA+ RWHR RG  V W+PGLDHAGIATQSVVER+L  E+G +R+DLGRE F+ +VW+W   YGGRI  Q+  +GA +  ++ YFTLD++RS AV+ AFV L+EK L++R  +MV+WCP LQTA++D+EVD+ ++ K +   LP  +K V+ G M  F+Y+I
Sbjct:  104 LPPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKEQGLSRYDLGREAFVDQVWQWNEQYGGRIMNQIDHLGAIVKKDQPYFTLDKQRSEAVINAFVTLYEKGLVYRKRRMVNWCPTLQTAISDIEVDSEQLEKATKKMLPGRDKPVEFGVMHRFKYQI 285

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A6A4ZPF2_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZPF2_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.680e-67
Identity = 101/182 (55.49%), Postives = 134/182 (73.63%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLP-NGEKVQVGTMDYFRYEI 181
            LPPPN+TGALH+GHA+ V +QDAL R+HR  G  VLW+PGLDHAGIATQSVVE++LW E   TRHD+GR  FL  V  W   YG RI  QL+++GA L  +  +FTLD+ RS+AVV+AF RLH K L++R  +MV+WCP LQTA++D+EVD + + K++ L LP +   V+ G M  F+Y++
Sbjct:   75 LPPPNITGALHIGHALTVTIQDALARYHRMCGHEVLWIPGLDHAGIATQSVVEKQLWKEHKLTRHDVGRSAFLDHVHTWNATYGSRILNQLERLGALLNKDHTFFTLDDTRSKAVVDAFCRLHAKGLVYRHRRMVNWCPTLQTAISDIEVDAVPLTKRTMLPLPGHATPVEFGVMHRFKYKV 256

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A225VG97_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VG97_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.530e-66
Identity = 105/182 (57.69%), Postives = 139/182 (76.37%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 181
            LPPPNVTGALH+GHA+ + +QDA+ RWHR RG  V W+PGLDHAGIATQSVVER+L  E G +R+DLGRE F+  VW+W   YGG+I  Q+  +GA +  ++ YFTLDEKRS AVVEAFV+L+EK L++R  +MV+WCP LQTA++D+EVD+ ++ K +   LP  EK V+ G M  F+Y++
Sbjct:  105 LPPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKERGLSRYDLGREAFVDEVWQWNEQYGGKIMSQIDHLGAIVKKDQPYFTLDEKRSEAVVEAFVKLYEKGLIYRRRRMVNWCPTLQTAISDIEVDSEQLEKATKKMLPGREKAVEFGVMHRFKYQV 286

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A2D4C7J2_PYTIN (Valine--tRNA ligase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7J2_PYTIN)

HSP 1 Score: 227 bits (579), Expect = 2.010e-66
Identity = 107/182 (58.79%), Postives = 138/182 (75.82%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 181
            LPPPNVTGALH+GHA+ + +Q AL RWH  RG  V W+PGLDHAGIATQSVVER+L  +EGRTRHDLGRE F+ RVW+W   YGGRI  Q+ ++GA +  E  +FTLD+KRS AVVEAFV+LHE+ L++R  +MV+WCP L+TA++D+EVD+  +   +  TLP   K V+ G M  F+Y+I
Sbjct:   91 LPPPNVTGALHIGHALTITIQXALARWHHMRGFDVQWIPGLDHAGIATQSVVERKLMKDEGRTRHDLGREAFVERVWQWNEQYGGRILHQIDQLGAIVDKEASFFTLDDKRSAAVVEAFVQLHERGLVYRKRRMVNWCPTLKTAISDIEVDSESLTGSTMKTLPGRXKPVEFGVMHRFKYQI 272

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BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0G4HLJ6_9ALVE (Valine--tRNA ligase (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HLJ6_9ALVE)

HSP 1 Score: 219 bits (557), Expect = 2.900e-66
Identity = 98/183 (53.55%), Postives = 138/183 (75.41%), Query Frame = 0

Query:    1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEIK 182
            +PPPNVTG LH+GH +  A++D L RWHR +G   LWVPG DHAGIATQ+VVER++   EG+TRHD GRE F+ +VWEW+   GG I  Q +++ A++ W +E FTLD+K S+AV EAFVR+ +  L++RGT++V WCPHL+TAL+D+EVDT ++   S +++P  +K V+VG + +F Y+IK
Sbjct:  166 IPPPNVTGNLHIGHTLTTAIEDTLTRWHRMKGDVSLWVPGQDHAGIATQTVVERQIQKLEGKTRHDYGREAFVNKVWEWKKQKGGNICMQTRRLAASVDWSREAFTLDDKLSKAVKEAFVRMFDAGLIYRGTRLVSWCPHLRTALSDIEVDTDDVEPFSKVSIPGFDKQVEVGVLVHFLYKIK 348

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0L0S8W1_ALLM3	4.630e-68	53.33	Valine--tRNA ligase n=1 Tax=Allomyces macrogynus (...	[more]
G4ZE43_PHYSP	9.410e-68	60.44	Valine--tRNA ligase n=6 Tax=Phytophthora TaxID=478...	[more]
A0A7J7IPL4_9RHOD	4.210e-67	55.74	Valine--tRNA ligase n=1 Tax=Cyanidiococcus yangmin...	[more]
W2Q1L0_PHYPN	4.310e-67	56.04	Valine--tRNA ligase n=1 Tax=Phytophthora parasitic...	[more]
A0A0P1AAC4_PLAHL	6.300e-67	57.69	Valine--tRNA ligase n=1 Tax=Plasmopara halstedii T...	[more]
A0A0W8CTI7_PHYNI	7.490e-67	56.04	Valine--tRNA ligase n=1 Tax=Phytophthora nicotiana...	[more]
A0A6A4ZPF2_9STRA	8.680e-67	55.49	Valine--tRNA ligase (Fragment) n=1 Tax=Aphanomyces...	[more]
A0A225VG97_9STRA	1.530e-66	57.69	Valine--tRNA ligase (Fragment) n=1 Tax=Phytophthor...	[more]
A0A2D4C7J2_PYTIN	2.010e-66	58.79	Valine--tRNA ligase n=1 Tax=Pythium insidiosum Tax...	[more]
A0A0G4HLJ6_9ALVE	2.900e-66	53.55	Valine--tRNA ligase (Fragment) n=1 Tax=Chromera ve...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..136 e-value: 4.7E-57 score: 195.4
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 2..159 e-value: 2.8E-57 score: 194.3
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	GENE3D	3.90.740.10		coord: 137..150 e-value: 4.7E-57 score: 195.4
None	No IPR available	PANTHER	PTHR11946	VALYL-TRNA SYNTHETASES	coord: 1..181
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 2..153
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 4..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig89767	contig	M-pyrifera_M_contig89767:2..547 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig89767.20807.1	mRNA_M-pyrifera_M_contig89767.20807.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig89767 2..547 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig89767.20807.1 ID=prot_M-pyrifera_M_contig89767.20807.1|Name=mRNA_M-pyrifera_M_contig89767.20807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQS
VVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAW
EKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEV
DTLEIHKKSTLTLPNGEKVQVGTMDYFRYEIK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR002300	aa-tRNA-synth_Ia
IPR009008	Val/Leu/Ile-tRNA-synth_edit
IPR001412	aa-tRNA-synth_I_CS