mRNA_M-pyrifera_M_contig89767.20807.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0L0S8W1_ALLM3 (Valine--tRNA ligase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S8W1_ALLM3) HSP 1 Score: 221 bits (563), Expect = 4.630e-68 Identity = 96/180 (53.33%), Postives = 131/180 (72.78%), Query Frame = 1 Query: 4 PPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEKVQVGTMDYFRYEI 543 PPPNVTG LH GHA+ A+QDA+ R+H GK+V W+PG DHAGIATQ+VVE++L EG+TRH+LGR+ FL RVW W+ A+G I+ QL+ +GA+ +W YFTLD RSR V +AF+ L + L++R T++VHWCP L+TA++D+EV+ L I + + P+G QVG M YFRY + Sbjct: 55 PPPNVTGRLHCGHALTTAIQDAIARYHHMHGKSVRWIPGTDHAGIATQTVVEKQLAKTEGKTRHELGRDAFLSRVWSWKDAHGDHIHHQLRALGASFSWSDAYFTLDTPRSRIVTDAFLELSRRGLIYRATRLVHWCPALETAISDMEVEYLTIDGPTAVPTPSGHSAQVGEMHYFRYPV 234
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: G4ZE43_PHYSP (Valine--tRNA ligase n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZE43_PHYSP) HSP 1 Score: 231 bits (590), Expect = 9.410e-68 Identity = 110/182 (60.44%), Postives = 140/182 (76.92%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 543 LPPPNVTGALHLGHA+ V +QDA+ RWHR RG V W+PGLDHAGIATQSVVER+L E+G +RHDLGRE F+ +VW W YGGRI Q+ +GA + ++ YFTLDE+RSRAVV+AFV+LHEK L++R +MV+WCP LQTA++D+EVD ++ K + LP EK V+ G M F+Y+I Sbjct: 3 LPPPNVTGALHLGHALTVTIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLLKEKGLSRHDLGREAFVQQVWAWNEQYGGRIMSQIDHLGAIVKKDQPYFTLDEQRSRAVVDAFVKLHEKGLVYRRRRMVNWCPTLQTAISDIEVDLEQLEKPTKKMLPGREKAVEFGVMHRFKYQI 184
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A7J7IPL4_9RHOD (Valine--tRNA ligase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPL4_9RHOD) HSP 1 Score: 221 bits (564), Expect = 4.210e-67 Identity = 102/183 (55.74%), Postives = 139/183 (75.96%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGE-KVQVGTMDYFRYEIK 546 +PPPNVTG LHLGH +M A+QD L RWHR +G LWVPG DHAGIATQ+VVER+L E TRHDLGRE F+ VW ++ YGGRI +QL+++GA++ W +E FT++EK SRAVVEAFVRLHE+ L++RGT++V+WC L+TAL+D+EV+ ++I + +P E +V+VG + F Y ++ Sbjct: 164 MPPPNVTGTLHLGHTLMCAIQDCLTRWHRMKGHVTLWVPGTDHAGIATQTVVERKLMKERKLTRHDLGREDFVQYVWSYKREYGGRICDQLRRLGASVDWSREQFTMNEKLSRAVVEAFVRLHERGLIYRGTRLVNWCCRLRTALSDIEVEYVDIPGRELRRVPGHEAEVEVGVLTQFAYPLE 346
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: W2Q1L0_PHYPN (Valine--tRNA ligase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q1L0_PHYPN) HSP 1 Score: 221 bits (564), Expect = 4.310e-67 Identity = 102/182 (56.04%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 543 LPPPNVTGALH+GHA+ + +QDA+ RWHR RG V W+PGLDHAGIATQSVVER+L E+G +R+DLGRE F+ +VW+W YGGRI Q+ +GA + ++ YFTLD++RS AV+ AFV L+EK L++R +MV+WCP LQTA++D+EVD+ ++ K + LP +K V+ G M F+Y+I Sbjct: 104 LPPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKEQGLSRYDLGREAFVDQVWQWNEQYGGRIMNQIDHLGAIVKKDQPYFTLDKQRSEAVINAFVTLYEKGLVYRKRRMVNWCPTLQTAISDIEVDSEQLEKATKKMLPGRDKPVEFGVMHRFKYQI 285
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0P1AAC4_PLAHL (Valine--tRNA ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAC4_PLAHL) HSP 1 Score: 230 bits (587), Expect = 6.300e-67 Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEKV-QVGTMDYFRYEI 543 LPPPN+TGALH+GHA+ + +QDA+ RWHR RG V W+PGLDHAGIATQSVVER+L E+G +RH++GRE F+ RVW+W YGG+I Q+ ++GA + ++ YFTLD +RS+AVV AFV+LHEK LL+RG +MV+WCP LQTA++D+EVD + K + LP G KV + G M F+Y+I Sbjct: 98 LPPPNITGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLMKEQGLSRHEIGREAFVDRVWQWNEQYGGKIMNQIDRLGAIVKKDQPYFTLDTERSKAVVTAFVKLHEKGLLYRGRRMVNWCPMLQTAISDIEVDLEPLDKATKKVLPGGHKVVEFGVMYRFKYQI 279
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0W8CTI7_PHYNI (Valine--tRNA ligase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CTI7_PHYNI) HSP 1 Score: 221 bits (564), Expect = 7.490e-67 Identity = 102/182 (56.04%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 543 LPPPNVTGALH+GHA+ + +QDA+ RWHR RG V W+PGLDHAGIATQSVVER+L E+G +R+DLGRE F+ +VW+W YGGRI Q+ +GA + ++ YFTLD++RS AV+ AFV L+EK L++R +MV+WCP LQTA++D+EVD+ ++ K + LP +K V+ G M F+Y+I Sbjct: 104 LPPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKEQGLSRYDLGREAFVDQVWQWNEQYGGRIMNQIDHLGAIVKKDQPYFTLDKQRSEAVINAFVTLYEKGLVYRKRRMVNWCPTLQTAISDIEVDSEQLEKATKKMLPGRDKPVEFGVMHRFKYQI 285
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A6A4ZPF2_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZPF2_9STRA) HSP 1 Score: 217 bits (552), Expect = 8.680e-67 Identity = 101/182 (55.49%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLP-NGEKVQVGTMDYFRYEI 543 LPPPN+TGALH+GHA+ V +QDAL R+HR G VLW+PGLDHAGIATQSVVE++LW E TRHD+GR FL V W YG RI QL+++GA L + +FTLD+ RS+AVV+AF RLH K L++R +MV+WCP LQTA++D+EVD + + K++ L LP + V+ G M F+Y++ Sbjct: 75 LPPPNITGALHIGHALTVTIQDALARYHRMCGHEVLWIPGLDHAGIATQSVVEKQLWKEHKLTRHDVGRSAFLDHVHTWNATYGSRILNQLERLGALLNKDHTFFTLDDTRSKAVVDAFCRLHAKGLVYRHRRMVNWCPTLQTAISDIEVDAVPLTKRTMLPLPGHATPVEFGVMHRFKYKV 256
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A225VG97_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VG97_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.530e-66 Identity = 105/182 (57.69%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 543 LPPPNVTGALH+GHA+ + +QDA+ RWHR RG V W+PGLDHAGIATQSVVER+L E G +R+DLGRE F+ VW+W YGG+I Q+ +GA + ++ YFTLDEKRS AVVEAFV+L+EK L++R +MV+WCP LQTA++D+EVD+ ++ K + LP EK V+ G M F+Y++ Sbjct: 105 LPPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKERGLSRYDLGREAFVDEVWQWNEQYGGKIMSQIDHLGAIVKKDQPYFTLDEKRSEAVVEAFVKLYEKGLIYRRRRMVNWCPTLQTAISDIEVDSEQLEKATKKMLPGREKAVEFGVMHRFKYQV 286
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A2D4C7J2_PYTIN (Valine--tRNA ligase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7J2_PYTIN) HSP 1 Score: 227 bits (579), Expect = 2.010e-66 Identity = 107/182 (58.79%), Postives = 138/182 (75.82%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEI 543 LPPPNVTGALH+GHA+ + +Q AL RWH RG V W+PGLDHAGIATQSVVER+L +EGRTRHDLGRE F+ RVW+W YGGRI Q+ ++GA + E +FTLD+KRS AVVEAFV+LHE+ L++R +MV+WCP L+TA++D+EVD+ + + TLP K V+ G M F+Y+I Sbjct: 91 LPPPNVTGALHIGHALTITIQXALARWHHMRGFDVQWIPGLDHAGIATQSVVERKLMKDEGRTRHDLGREAFVERVWQWNEQYGGRILHQIDQLGAIVDKEASFFTLDDKRSAAVVEAFVQLHERGLVYRKRRMVNWCPTLKTAISDIEVDSESLTGSTMKTLPGRXKPVEFGVMHRFKYQI 272
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Match: A0A0G4HLJ6_9ALVE (Valine--tRNA ligase (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HLJ6_9ALVE) HSP 1 Score: 219 bits (557), Expect = 2.900e-66 Identity = 98/183 (53.55%), Postives = 138/183 (75.41%), Query Frame = 1 Query: 1 LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSVVERELWGEEGRTRHDLGREGFLGRVWEWRGAYGGRINEQLQKMGATLAWEKEYFTLDEKRSRAVVEAFVRLHEKKLLFRGTQMVHWCPHLQTALADLEVDTLEIHKKSTLTLPNGEK-VQVGTMDYFRYEIK 546 +PPPNVTG LH+GH + A++D L RWHR +G LWVPG DHAGIATQ+VVER++ EG+TRHD GRE F+ +VWEW+ GG I Q +++ A++ W +E FTLD+K S+AV EAFVR+ + L++RGT++V WCPHL+TAL+D+EVDT ++ S +++P +K V+VG + +F Y+IK Sbjct: 166 IPPPNVTGNLHIGHTLTTAIEDTLTRWHRMKGDVSLWVPGQDHAGIATQTVVERQIQKLEGKTRHDYGREAFVNKVWEWKKQKGGNICMQTRRLAASVDWSREAFTLDDKLSKAVKEAFVRMFDAGLIYRGTRLVSWCPHLRTALSDIEVDTDDVEPFSKVSIPGFDKQVEVGVLVHFLYKIK 348 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89767.20807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89767.20807.1 >prot_M-pyrifera_M_contig89767.20807.1 ID=prot_M-pyrifera_M_contig89767.20807.1|Name=mRNA_M-pyrifera_M_contig89767.20807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp LPPPNVTGALHLGHAMMVAVQDALVRWHRQRGKAVLWVPGLDHAGIATQSback to top mRNA from alignment at M-pyrifera_M_contig89767:2..547+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89767.20807.1 ID=mRNA_M-pyrifera_M_contig89767.20807.1|Name=mRNA_M-pyrifera_M_contig89767.20807.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig89767:2..547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89767:2..547+ >mRNA_M-pyrifera_M_contig89767.20807.1 ID=mRNA_M-pyrifera_M_contig89767.20807.1|Name=mRNA_M-pyrifera_M_contig89767.20807.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig89767:2..547+ (Macrocystis pyrifera P11B4 male)back to top |