prot_M-pyrifera_M_contig88881.20623.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88881.20623.1
Unique Nameprot_M-pyrifera_M_contig88881.20623.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length68
Homology
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.050e-25
Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    4 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            +T  QL GGEGNLLASAVVT+YATFLCFSAVSKTPTS CNPFVGESN TVVLIG+ LT+LSL W
Sbjct:  246 ITALQLLGGEGNLLASAVVTSYATFLCFSAVSKTPTSSCNPFVGESNTTVVLIGIALTVLSLFW 309          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.790e-16
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    5 TLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGES-NLTVVLIGLGLTLLSLIW 67
            T+ QLSG EGNLL SA+V+ Y TFL FSAVSK P + CNPF+G S NLT +++GL LT LSL+W
Sbjct:  244 TVLQLSGPEGNLLTSALVSVYMTFLGFSAVSKNPDASCNPFIGSSQNLTSIIVGLVLTFLSLLW 307          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7R9WZ09_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ09_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.440e-15
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    3 VVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSL 65
            ++T  QLSGGEG+LLAS+++T YAT LC+SAVSK P  DCNPF+GE +   + IG+G T+++L
Sbjct:  318 IITGAQLSGGEGSLLASSLITLYATSLCYSAVSKNPDRDCNPFLGEDDFLGIFIGVGFTVVAL 380          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A1E7F563_9STRA (Serinc-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F563_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.530e-15
Identity = 37/62 (59.68%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    4 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSL 65
            VT TQLSG EG+LLAS+++TAYAT LC++AV++ P SDCNP +G  +   ++IGLGLT++SL
Sbjct:  254 VTGTQLSGSEGSLLASSLITAYATMLCYNAVTRNPNSDCNPQLGGDDNLSIIIGLGLTIVSL 315          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7R9WUP5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUP5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.550e-14
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    5 TLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            T  QLSG EG+LL S+V++ YAT+LCFS VSK P   CNP +G +++  ++IGL LT+LSLIW
Sbjct:   88 TALQLSGTEGSLLTSSVISLYATYLCFSIVSKNPNGTCNPRLGHNDVWGIIIGLFLTVLSLIW 150          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7S2I2C9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2C9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.340e-14
Identity = 32/65 (49.23%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    3 VVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            +VT  QLSG E +LL SA++ AY+T+LC++AVS+ P  +CNP +G+ ++  +++G+GL LLSL W
Sbjct:  265 IVTAVQLSGEESSLLTSAIIVAYSTYLCYTAVSRNPNDECNPQLGDEDILGIVLGIGLCLLSLTW 329          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7S2PAW5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PAW5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.990e-14
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    4 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            +T  QLSG +G+LL SA+++AYA +L F+++SK P  DCNP +GE+N   ++IG+G TL+SL W
Sbjct:  269 ITGVQLSGEDGSLLTSAIISAYAAYLAFTSMSKNPDGDCNPRLGENNALGIVIGVGFTLISLTW 332          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A1E7FLQ1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ1_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.700e-13
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    4 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            +T  QLSG EG+LL S VV+ YA +LCFS +S  P  DCNP +G +++  + IGL  T +SLIW
Sbjct:   30 ITAIQLSGTEGSLLTSGVVSIYAIYLCFSIISSNPKGDCNPQLGSNDIWGITIGLLFTTISLIW 93          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7S2R074_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R074_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.330e-13
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    3 VVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            VVT+ QLSG EG+L+ SAVV+AY  +L F+AVSK P  +CNP +G +N+  +  GL LT +SL W
Sbjct:  253 VVTIIQLSGTEGSLMTSAVVSAYTAYLAFAAVSKNPNGECNPSLGSNNVWSIAAGLILTSISLAW 317          
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7R9VDP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VDP0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.060e-12
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    4 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 67
            +T+ QLSG EG+LL S+V++AY T+L +S VSK P   CNP +G ++   + IGL LT +SL W
Sbjct:   54 ITVVQLSGTEGSLLTSSVISAYVTYLAYSLVSKNPNGQCNPQLGTNDAWGIAIGLVLTAISLAW 117          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G4C2_ECTSI1.050e-2582.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG76_9STRA2.790e-1664.06Serine incorporator/TMS membrane protein n=1 Tax=T... [more]
A0A7R9WZ09_9STRA1.440e-1557.14Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A1E7F563_9STRA3.530e-1559.68Serinc-domain-containing protein n=1 Tax=Fragilari... [more]
A0A7R9WUP5_9STRA1.550e-1457.14Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2I2C9_9STRA2.340e-1449.23Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2PAW5_9STRA5.990e-1451.56Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1E7FLQ1_9STRA1.700e-1351.56Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2R074_9STRA5.330e-1353.85Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9VDP0_9STRA1.060e-1250.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 9..67
e-value: 3.9E-11
score: 42.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..67
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88881contigM-pyrifera_M_contig88881:519..722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88881.20623.1mRNA_M-pyrifera_M_contig88881.20623.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88881 519..731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88881.20623.1 ID=prot_M-pyrifera_M_contig88881.20623.1|Name=mRNA_M-pyrifera_M_contig88881.20623.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
MKVVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESN
LTVVLIGLGLTLLSLIW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS