prot_M-pyrifera_M_contig88540.20554.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88540.20554.1
Unique Nameprot_M-pyrifera_M_contig88540.20554.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length37
Homology
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BLAST of mRNA_M-pyrifera_M_contig88540.20554.1 vs. uniprot
Match: D7FZ79_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ79_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.710e-14
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    2 RKYSKKPEGGGRGVTVTREGAIHVTNVNLVCPQTG 36
            RKYSKKPEGGGRG TVTRE AIHVTNVNLVCP+TG
Sbjct:   77 RKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETG 111
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88540.20554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ79_ECTSI1.710e-1491.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003256Ribosomal protein L24PFAMPF17136ribosomal_L24coord: 4..36
e-value: 3.9E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88540contigM-pyrifera_M_contig88540:168..278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88540.20554.1mRNA_M-pyrifera_M_contig88540.20554.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88540 168..278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88540.20554.1 ID=prot_M-pyrifera_M_contig88540.20554.1|Name=mRNA_M-pyrifera_M_contig88540.20554.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=37bp
QRKYSKKPEGGGRGVTVTREGAIHVTNVNLVCPQTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003256Ribosomal_L24