prot_M-pyrifera_M_contig88499.20547.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88499.20547.1
Unique Nameprot_M-pyrifera_M_contig88499.20547.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length217
Homology
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Match: A0A838SS64_9ACTN (Uncharacterized protein (Fragment) n=2 Tax=Euzebyales bacterium TaxID=2740540 RepID=A0A838SS64_9ACTN)

HSP 1 Score: 77.8 bits (190), Expect = 1.890e-14
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   64 WRVMSPSPLDARAGSASVWTGDRWFIWGGHQAS----PVGVEYFADGALYDPETDRWQVIAPAPLGKSTLPDAVLVGGEIIVGGGS 145
            WR M+P+P+  RAG  +VWTGD+  +WGG + +    P G     DGA Y+P TDRW+ + PAP+G      AV  G E+++ GG+
Sbjct:   78 WRQMAPAPIGPRAGHVAVWTGDQLVVWGGREVTGRRLPRG-----DGAAYNPGTDRWRRLPPAPIGPRADAAAVWTGREVVIWGGA 158          
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Match: A0A7Y5RQ44_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5RQ44_9PLAN)

HSP 1 Score: 60.1 bits (144), Expect = 5.950e-7
Identity = 39/94 (41.49%), Postives = 45/94 (47.87%), Query Frame = 0
Query:   71 PLDARAGSASVWTGD--------RWFIWGGHQASPVGVEYFADGALYDPETDRWQVIAPAPLGKSTLPDAVLVGGEIIVGGG-STDTQESADAA 155
            PL AR    +VWTGD        +  IWGG         YFADGALYDP T  W +IA  PLG      AV  G  +IV  G   +T  S  A+
Sbjct:  870 PLAARMYHVAVWTGDTGNPATSNKMIIWGGASNLSSSNSYFADGALYDPATGVWTMIASGPLGGRHSASAVWDGERMIVWAGYGKETPSSTSAS 963          
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Match: UPI001C62B7CD (hypothetical protein n=1 Tax=Cryobacterium sp. PAMC25264 TaxID=2861288 RepID=UPI001C62B7CD)

HSP 1 Score: 57.4 bits (137), Expect = 4.140e-6
Identity = 35/84 (41.67%), Postives = 41/84 (48.81%), Query Frame = 0
Query:   64 WRVMSPSPLDARAGSASVWTGDRWFIWGGHQASPV--------GVEYFADGALYDPETDRWQVIAPAPLGKSTLPDAVLVGGEI 139
            W  +  SPL  R  S   W GDR+ I GG    P         G     DGA Y+P TD WQ IAPAPL  +    AV VGG++
Sbjct:  155 WGELPESPLSPRRDSLGAWVGDRFVIVGGRTDKPCPPAADCADGEPARQDGASYNPYTDMWQRIAPAPLPVNQYSSAV-VGGDL 237          
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Match: A0A3N1CVV1_9ACTN (Uncharacterized protein n=1 Tax=Actinocorallia herbida TaxID=58109 RepID=A0A3N1CVV1_9ACTN)

HSP 1 Score: 56.2 bits (134), Expect = 8.540e-6
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   63 TWRVMSPSPLDARAGSASVWTGDRWFIWGG--HQASPVG------VEYFADGALYDPETDRWQVIAPAPL 124
            T RV+  +P+  R+ S +VWTG    +WGG   +    G      VE  ADGA YDP TDRW+V+  APL
Sbjct:   11 TVRVLPGAPVPGRSWSGAVWTGREMVVWGGVTEREETDGKKVRTVVEERADGAAYDPATDRWRVLPVAPL 80          
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Match: A0A7V9T8E4_9ACTN (Galactose oxidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9T8E4_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 9.120e-6
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:   80 SVWTGDRWFIWGGHQASPVGVEYFADGALYDPETDRWQVIAPAPLG 125
            +VWTG    +WGG+         FADGA Y+PETDRW+V+A AP+G
Sbjct:    4 AVWTGREMIVWGGNDLVRPS---FADGAAYEPETDRWRVLAAAPIG 46          
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Match: UPI001C667584 (hypothetical protein n=1 Tax=Actinoplanes hulinensis TaxID=1144547 RepID=UPI001C667584)

HSP 1 Score: 53.5 bits (127), Expect = 7.220e-5
Identity = 33/86 (38.37%), Postives = 44/86 (51.16%), Query Frame = 0
Query:   64 WRVMSPSPLDARAGSASVWTGDRWFIWGGHQASP-------VGVEY-FADGALYDPETDRWQVIAPAPLGKSTLPDAVLVGGEIIV 141
            W  +  SPL  R     +WTG    + GG  ASP       VG     ADGA +DP TDRW+ IA +P+   T  ++ +VGG + V
Sbjct:   38 WTALPKSPLSPREAVLGLWTGREVLLIGGSDASPCPPSASCVGDPTPLADGAAFDPATDRWRKIADSPV-PLTGGESAVVGGTVYV 122          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88499.20547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A838SS64_9ACTN1.890e-1443.02Uncharacterized protein (Fragment) n=2 Tax=Euzebya... [more]
A0A7Y5RQ44_9PLAN5.950e-741.49Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
UPI001C62B7CD4.140e-641.67hypothetical protein n=1 Tax=Cryobacterium sp. PAM... [more]
A0A3N1CVV1_9ACTN8.540e-644.29Uncharacterized protein n=1 Tax=Actinocorallia her... [more]
A0A7V9T8E4_9ACTN9.120e-652.17Galactose oxidase n=1 Tax=Actinomycetia bacterium ... [more]
UPI001C6675847.220e-538.37hypothetical protein n=1 Tax=Actinoplanes hulinens... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 7..215
e-value: 3.4E-20
score: 74.1
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 63..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..217
NoneNo IPR availableTMHMMTMhelixcoord: 28..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88499contigM-pyrifera_M_contig88499:36..686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88499.20547.1mRNA_M-pyrifera_M_contig88499.20547.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88499 36..686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88499.20547.1 ID=prot_M-pyrifera_M_contig88499.20547.1|Name=mRNA_M-pyrifera_M_contig88499.20547.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
MGVPDGRVTDTAVAPADAPSPRRVRERALVVGAVAIVVALLGTLAALDRT
ADDLDTTTATFTTWRVMSPSPLDARAGSASVWTGDRWFIWGGHQASPVGV
EYFADGALYDPETDRWQVIAPAPLGKSTLPDAVLVGGEIIVGGGSTDTQE
SADAALAAYDPATDRWRVLPDAPGPIVHLQLIDETPTATVVVGEMTALSR
LDMATSAWSEPVSTDLS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller