prot_M-pyrifera_M_contig88349.20522.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88349.20522.1
Unique Nameprot_M-pyrifera_M_contig88349.20522.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length263
Homology
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A2E0T4C4_9ACTN (DNA topoisomerase 1 n=10 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T4C4_9ACTN)

HSP 1 Score: 408 bits (1048), Expect = 1.650e-133
Identity = 210/263 (79.85%), Postives = 230/263 (87.45%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEESVAQ 263
            MAF+ A YWD+KG FAAA+G  +   EF+AAL  IDGVRLASGRDFGDDG L+RDDV VLDEAGA  LVG L+GVPYEVR+RE+KPYRRRPAAPFITST+QQEAG KLG+S+ MAMRAAQGLYEKG+ITYMRTDSTTLSDTALQAARTMISERYG +FLPDA RHY  KSKNAQEAHEAIRPAGDTFRLP EVA EVP SEAR YELIW+R VASQMTDCTGETV L+LGAT+  G+DVEF+ASGTVI H GFREVYEE+  Q
Sbjct:  198 MAFIEASYWDVKGTFAAAQG--DDQREFSAALNTIDGVRLASGRDFGDDGRLARDDVTVLDEAGAQALVGALDGVPYEVRARETKPYRRRPAAPFITSTYQQEAGRKLGMSAQMAMRAAQGLYEKGYITYMRTDSTTLSDTALQAARTMISERYGTDFLPDAPRHYATKSKNAQEAHEAIRPAGDTFRLPAEVAQEVPQSEARAYELIWQRAVASQMTDCTGETVTLKLGATAHDGRDVEFAASGTVIAHMGFREVYEETKVQ 458          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A7K1ZB63_9ACTN (DNA topoisomerase 1 n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZB63_9ACTN)

HSP 1 Score: 381 bits (979), Expect = 2.030e-123
Identity = 197/260 (75.77%), Postives = 223/260 (85.77%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEES 260
            M F +A YW + G FAA  G    + EF+A+LA IDGV+LASGRDFGDDG L+R+DV VLDE+ A+ LVG+LE VPYEVRSRE+KPYRRRPAAPFITST+QQEAG KL +S+ MAMRAAQGLYEKG+ITYMRTDSTTLS+TALQAAR  I  RYG ++LPD+ R YTKKSKNAQEAHEAIRPAG++FR P+EVA+EVP SEAR YELIWKRTVASQMTDCTGETVQLRLGATS  G +V FSASGTVI HRGFREVYEE+
Sbjct:  199 MDFRAASYWSVSGTFAAVSG---DTREFSASLASIDGVKLASGRDFGDDGRLAREDVRVLDESAASKLVGELERVPYEVRSREAKPYRRRPAAPFITSTYQQEAGRKLKMSAQMAMRAAQGLYEKGYITYMRTDSTTLSETALQAARATIKNRYGTQYLPDSPRRYTKKSKNAQEAHEAIRPAGESFRSPEEVASEVPSSEARAYELIWKRTVASQMTDCTGETVQLRLGATSRSGSEVVFSASGTVISHRGFREVYEET 455          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A3M2GQ16_ACTSX (DNA topoisomerase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GQ16_ACTSX)

HSP 1 Score: 338 bits (867), Expect = 4.770e-107
Identity = 184/259 (71.04%), Postives = 208/259 (80.31%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEE 259
            +AFV A YW +   FAAA+ A   +  F A+L  +DG R+A+GRDFG DG  SRDDVVVL+   A  LV DL+GV   VRSRE++PYRRRPAAPFITSTFQQEAG KL +S+A AMRAAQ LYEKG+ITYMRTDSTTLSDTAL+AAR +I+ER+G E LPDA R YT+K KNAQEAHEAIRPAGDTFR P EVA EVP +EARVYELIW+RTVASQM D TGETVQLRLGAT+  G+DVEFSASGTVI   GFR VY E
Sbjct:  216 IAFVPAEYWSLTATFAAADDA--EARPFDASLVALDGTRVATGRDFGADGRPSRDDVVVLEGDTARALVDDLDGVEVAVRSREARPYRRRPAAPFITSTFQQEAGRKLRMSAAAAMRAAQSLYEKGYITYMRTDSTTLSDTALRAARAVIAERFGVENLPDAPRTYTRKVKNAQEAHEAIRPAGDTFRSPAEVAREVPPAEARVYELIWQRTVASQMVDATGETVQLRLGATTRSGRDVEFSASGTVITRPGFRLVYVE 472          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A520Y072_9ACTN (DNA topoisomerase 1 n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y072_9ACTN)

HSP 1 Score: 327 bits (838), Expect = 1.370e-102
Identity = 175/260 (67.31%), Postives = 204/260 (78.46%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGA-AESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEE 259
            MAFV A YWD++G+F+  +   A   + F+A L +ID  R+ASG+DF D G  ++D+VVVL E+ ATTLV  LEG  +EVRS E KPYRRRPAAPF+T+TFQQEAG KL LSSAMAMR AQGLYEKG+ITYMRTDSTTLS TAL AAR +I + YG+ F+P   R Y  KSKNAQEAHEAIRPAGDTF+ P EVA EVP SEA VYELIWKRTVASQMTD TGET+  R+G T+S G+DV FSASGT+I H+GFR VY E
Sbjct:  195 MAFVRASYWDLEGRFSVTKDVPAGEPTSFSAKLLEIDSARVASGKDFDDTGR-AKDNVVVLGESDATTLVSALEGASFEVRSVEPKPYRRRPAAPFMTATFQQEAGRKLKLSSAMAMRGAQGLYEKGYITYMRTDSTTLSATALSAARDVIKKEYGENFMPAEPRIYATKSKNAQEAHEAIRPAGDTFKSPAEVAREVPKSEAAVYELIWKRTVASQMTDATGETISARVGTTASDGRDVVFSASGTIISHQGFRRVYVE 453          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A6B1EA69_9ACTN (DNA topoisomerase 1 n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EA69_9ACTN)

HSP 1 Score: 318 bits (815), Expect = 2.060e-99
Identity = 166/259 (64.09%), Postives = 196/259 (75.68%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEE 259
            M+FVSA +W +   FA  +   E   EFTAALA +DG R+A+ RDFG DG  +R D+ VLDEAGA TLV DL    + VRSR SKPYRRRPA PFITST QQEA  KLG+SSA AMR AQ LYEKG+ITYMRTDST+LS  A+ AAR+ ++ RYG++ LP   R Y  K KNAQEAHEA+RPAG+ F  P  VA +VP  EAR+Y+L+WKRT+ASQMTDCTGETVQLR+GA +S G+D EF+ASGTVI H GFREVY E
Sbjct:  196 MSFVSASFWGLTATFAPRD---EQGPEFTAALASLDGSRVATARDFGPDGRATRSDLTVLDEAGAATLVADLHDSDFAVRSRTSKPYRRRPAPPFITSTLQQEAARKLGMSSAAAMRTAQSLYEKGYITYMRTDSTSLSSAAVAAARSEVASRYGQDLLPAKPRTYASKVKNAQEAHEAVRPAGEAFADPRTVAQQVPQPEARLYDLVWKRTLASQMTDCTGETVQLRVGARTSTGRDAEFAASGTVITHMGFREVYTE 451          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: UPI001E494DA7 (type I DNA topoisomerase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=UPI001E494DA7)

HSP 1 Score: 318 bits (816), Expect = 3.780e-99
Identity = 171/259 (66.02%), Postives = 198/259 (76.45%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEE 259
            MAFV+AGYWD+ G FA  EG  E   + TA L  +DG R+A+GRDF   G ++ D VV LDEA AT+L   L      VRS ES+PYRRRPAAPF+TST+QQEAG KL +SSA AMRAAQ LYE+G+ITYMRTDSTTLS+TAL AART I ER+G +FLPDA RHYTKK KNAQEAHEAIRPAGD FR P EVA EV  +EAR YE+IW RT+ASQMTD  GETV +RLG  ++ G+D EFS +GTVI H+GFR VY E
Sbjct:  196 MAFVAAGYWDLDGVFAPREGDDER-PDVTATLVAVDGARVATGRDFDSSGQVA-DGVVRLDEAAATSLADGLRDAEVTVRSVESRPYRRRPAAPFMTSTYQQEAGRKLRMSSAQAMRAAQTLYEQGYITYMRTDSTTLSETALNAARTEIGERFGTQFLPDAPRHYTKKVKNAQEAHEAIRPAGDRFRPPAEVAQEVGPAEARAYEMIWNRTIASQMTDAVGETVVVRLGGVATDGRDAEFSTTGTVITHQGFRRVYVE 452          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A6B0WHB1_9ACTN (DNA topoisomerase 1 n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WHB1_9ACTN)

HSP 1 Score: 317 bits (812), Expect = 6.160e-99
Identity = 169/262 (64.50%), Postives = 200/262 (76.34%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSS---EFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEE 259
            M FVSAG+W + G FA A G+A+ +S   EFTA L Q+DG R+A+ RDFG DG  +R DV VL+EA A +LV DL+   + VR+R SKPYRRRPAAPFITST QQEA  KL ++SA AMR AQ LYEKG+ITYMRTDST+LS  A+ AAR+ +  RYG   LP   R Y  + KNAQEAHEAIRPAGDTF  P  VA+++P  EAR+YEL+WKRT+ASQMTDCTGETVQLRLGA S+ G+D EF+ASGTVI H GFREVY E
Sbjct:  196 MDFVSAGFWGLTGTFAPA-GSADGNSNGTEFTADLVQLDGARIAAARDFGSDGQPTRGDVTVLNEAAAMSLVSDLQDAAFAVRARTSKPYRRRPAAPFITSTMQQEAARKLHMTSAAAMRTAQSLYEKGYITYMRTDSTSLSADAVAAARSEVERRYGSSVLPPEPRAYASRVKNAQEAHEAIRPAGDTFADPSTVADQLPPPEARLYELVWKRTLASQMTDCTGETVQLRLGARSASGRDAEFAASGTVITHLGFREVYTE 456          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A538CTI9_9ACTN (DNA topoisomerase 1 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CTI9_9ACTN)

HSP 1 Score: 312 bits (799), Expect = 9.030e-97
Identity = 169/263 (64.26%), Postives = 195/263 (74.14%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQF--AAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEESV 261
            M FVSA YWD+   F      G  E  S F A L  +DG R+A+GRDF  DG +  DDVVVL EA A  LV DL    + V S ESKPYRRRPAAPF+TSTFQQEA  KL LSSA AMR AQ LYEKG+ITYMRTDSTTLSDTA+ AAR++ISERYG+++LPD  RHY  K KNAQEAHEAIRPAG+TFRLP++VA E+P +EARVYELIW+RTVASQMTD  GETV +R+G  +   +  EFSA+GT+I H GFR  Y E V
Sbjct:  209 MRFVSARYWDLSATFHKIGQLGDGEPRS-FEATLTGLDGKRVATGRDFDSDGKIKSDDVVVLGEAAAAELVTDLADTNFSVNSVESKPYRRRPAAPFMTSTFQQEASRKLRLSSAHAMRYAQSLYEKGYITYMRTDSTTLSDTAVAAARSIISERYGRDYLPDGPRHYASKVKNAQEAHEAIRPAGETFRLPEQVARELPTTEARVYELIWQRTVASQMTDAVGETVVVRVGGDTRTRRAAEFSATGTIITHAGFRRAYVEDV 470          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A351KA78_9ACTN (DNA topoisomerase (Fragment) n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A351KA78_9ACTN)

HSP 1 Score: 306 bits (784), Expect = 1.960e-96
Identity = 167/266 (62.78%), Postives = 192/266 (72.18%), Query Frame = 0
Query:    1 MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRL----GATSSG-GKDVEFSASGTVIQHRGFREVYEESV 261
            M F++AGYWD+    A    A   +  FT  L  +DG R+ASGRDFGDDG  SRDDV VLDE  A  L   L G P  V S E KPYRRRPAAPFITST QQEAG KL LS+++AM AAQGLY+KG+ITYMRTDSTTLSDTA+ AAR ++ ER+G + LPDA R Y  K +NAQEAHEAIRPAGD FR PD+VA E+  SEAR+YE+IW+RTVASQMTD  GETV++ L    G    G   DV FSASGTVI H+GFR VY E V
Sbjct:  211 MQFMAAGYWDLTATVA---DAGTDTGSFTTRLVAVDGTRVASGRDFGDDGRPSRDDVRVLDEVAAGALTAGLVGRPLAVASVEPKPYRRRPAAPFITSTLQQEAGRKLRLSASLAMHAAQGLYQKGYITYMRTDSTTLSDTAISAARAVVRERFGADHLPDAPRTYANKVRNAQEAHEAIRPAGDRFRHPDDVAGELSKSEARIYEMIWQRTVASQMTDAVGETVRITLTGEVGPDGGGVASDVTFSASGTVISHQGFRRVYREDV 473          
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Match: A0A7K2DA21_9ACTN (DNA topoisomerase I n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DA21_9ACTN)

HSP 1 Score: 303 bits (775), Expect = 1.960e-95
Identity = 155/233 (66.52%), Postives = 181/233 (77.68%), Query Frame = 0
Query:   27 EFTAALAQIDGVRLASGRDFGDDGSLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTFQQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMISERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPISEARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQHRGFREVYEE 259
            EFTA L Q+DG R+A+ RDFG DG  +R +V VLDEA AT+L  DL+   Y VR+R SKPYRRRPAAPFITST QQEA  KL ++SA+AMR AQ LYEKG+ITYMRTDST+LS  A+ AAR+ +  RYG   LP   R Y  K KNAQEAHEAIRPAGDTF  P  V +++P  EAR+YEL+WKRT+ASQMTDCTGETVQLR+GA S+ G+D EF+ASGTVI H GFREVY E
Sbjct:   14 EFTADLVQLDGSRIAAARDFGSDGQPTRGEVTVLDEAAATSLASDLQDAAYAVRARTSKPYRRRPAAPFITSTLQQEAARKLHMTSAVAMRTAQSLYEKGYITYMRTDSTSLSANAVAAARSEVERRYGSSVLPPEPRAYASKVKNAQEAHEAIRPAGDTFTDPSTVDSQLPRPEARLYELVWKRTLASQMTDCTGETVQLRVGARSASGRDAEFAASGTVITHMGFREVYTE 246          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88349.20522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0T4C4_9ACTN1.650e-13379.85DNA topoisomerase 1 n=10 Tax=Acidimicrobiaceae bac... [more]
A0A7K1ZB63_9ACTN2.030e-12375.77DNA topoisomerase 1 n=2 Tax=Acidimicrobiaceae bact... [more]
A0A3M2GQ16_ACTSX4.770e-10771.04DNA topoisomerase (Fragment) n=1 Tax=Actinomyces s... [more]
A0A520Y072_9ACTN1.370e-10267.31DNA topoisomerase 1 n=2 Tax=Acidimicrobiales bacte... [more]
A0A6B1EA69_9ACTN2.060e-9964.09DNA topoisomerase 1 n=2 Tax=Acidimicrobiaceae bact... [more]
UPI001E494DA73.780e-9966.02type I DNA topoisomerase n=1 Tax=Actinomarinicola ... [more]
A0A6B0WHB1_9ACTN6.160e-9964.50DNA topoisomerase 1 n=9 Tax=Acidimicrobiaceae bact... [more]
A0A538CTI9_9ACTN9.030e-9764.26DNA topoisomerase 1 n=1 Tax=Actinomycetia bacteriu... [more]
A0A351KA78_9ACTN1.960e-9662.78DNA topoisomerase (Fragment) n=3 Tax=Acidimicrobii... [more]
A0A7K2DA21_9ACTN1.960e-9566.52DNA topoisomerase I n=1 Tax=Acidimicrobiaceae bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPRINTSPR00417PRTPISMRASEIcoord: 125..134
score: 67.2
coord: 204..220
score: 45.72
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 2..260
e-value: 8.6E-53
score: 179.8
IPR003602DNA topoisomerase, type IA, DNA-binding domainSMARTSM00437topIaneu2coord: 83..262
e-value: 1.4E-28
score: 111.0
IPR013826DNA topoisomerase, type IA, central region, subdomain 3GENE3D1.10.290.10coord: 91..218
e-value: 8.6E-47
score: 160.9
IPR000380DNA topoisomerase, type IAPANTHERPTHR42785FAMILY NOT NAMEDcoord: 2..262
NoneNo IPR availablePANTHERPTHR42785:SF1DNA TOPOISOMERASE, TYPE IA, COREcoord: 2..262
IPR023406DNA topoisomerase, type IA, active sitePROSITEPS00396TOPOISOMERASE_I_PROKcoord: 120..134
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88349contigM-pyrifera_M_contig88349:33..821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88349.20522.1mRNA_M-pyrifera_M_contig88349.20522.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88349 3..821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88349.20522.1 ID=prot_M-pyrifera_M_contig88349.20522.1|Name=mRNA_M-pyrifera_M_contig88349.20522.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
MAFVSAGYWDIKGQFAAAEGAAESSSEFTAALAQIDGVRLASGRDFGDDG
SLSRDDVVVLDEAGATTLVGDLEGVPYEVRSRESKPYRRRPAAPFITSTF
QQEAGNKLGLSSAMAMRAAQGLYEKGFITYMRTDSTTLSDTALQAARTMI
SERYGKEFLPDAARHYTKKSKNAQEAHEAIRPAGDTFRLPDEVANEVPIS
EARVYELIWKRTVASQMTDCTGETVQLRLGATSSGGKDVEFSASGTVIQH
RGFREVYEESVAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013497Topo_IA_cen
IPR003602Topo_IA_DNA-bd_dom
IPR013826Topo_IA_cen_sub3
IPR000380Topo_IA
IPR023406Topo_IA_AS
IPR023405Topo_IA_core_domain