prot_M-pyrifera_M_contig88336.20516.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88336.20516.1
Unique Nameprot_M-pyrifera_M_contig88336.20516.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
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BLAST of mRNA_M-pyrifera_M_contig88336.20516.1 vs. uniprot
Match: UPI00199BF6D5 (Uncharacterized protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI00199BF6D5)

HSP 1 Score: 67.0 bits (162), Expect = 1.600e-10
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 0 
Query:    6 SKLELDGTAHEDWIDLKASLTVHLVVADRWVYVPMRFDQASLLDYKHSGSGDIASPADSQRP-RGLSWLLRGAGNHQLQMTLRVPLRKTPTGDLLQLELPEMRYFTGKLT 114
            S +EL G A ++   L   L V L   + WV VP++ +QA +L   H  +GD     D + P RG  W  RGAG HQL +++ VP+R+      LQL LP       KLT
Sbjct:  124 SSIELTGDADDERATLNVRLVVRLRQPNEWVQVPLQLNQA-VLTKPHKYTGDGQEIPDRKDPDRGHVWWFRGAGPHQLDLSMSVPIRRQLPSRRLQLSLPASPVAKLKLT 232
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BLAST of mRNA_M-pyrifera_M_contig88336.20516.1 vs. uniprot
Match: A0A3L7UBW1_9BACT (Phage holin family protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7UBW1_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 3.790e-7
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0 
Query:    1 PDFFFSKLELDGTA--HEDWIDLKASLTVHLVVADRWVYVPMRFDQASLLDY-KHSGSGDIASPADSQRPRGLSWLLRGAGNHQLQMTLRVPLRKTPTGDLLQLELPEMRYFTGKLTLRLP 118
            P F  S +  +G+A  +ED + L A+L++ +      V VP+R ++A+LL   +H G  +        R  G    LRG G H+L+M+L VP+R+      L L LPE      KL + LP
Sbjct:  117 PPFSVSGVSFEGSAEANEDTVTLDATLSISVNRDGEDVLVPLRLNEATLLKKPEHLGPNEAEFDV-FDREEGYRCWLRGKGQHELKMSLAVPVRRQVAARRLMLRLPETPKSAIKLNVPLP 236
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88336.20516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI00199BF6D51.600e-1038.18Uncharacterized protein n=1 Tax=Candidatus Sacchar... [more]
A0A3L7UBW1_9BACT3.790e-733.88Phage holin family protein n=2 Tax=Planctomycetes ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88336contigM-pyrifera_M_contig88336:27..380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88336.20516.1mRNA_M-pyrifera_M_contig88336.20516.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88336 27..380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88336.20516.1 ID=prot_M-pyrifera_M_contig88336.20516.1|Name=mRNA_M-pyrifera_M_contig88336.20516.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
PDFFFSKLELDGTAHEDWIDLKASLTVHLVVADRWVYVPMRFDQASLLDY
KHSGSGDIASPADSQRPRGLSWLLRGAGNHQLQMTLRVPLRKTPTGDLLQ
LELPEMRYFTGKLTLRLP
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