prot_M-pyrifera_M_contig88328.20513.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88328.20513.1
Unique Nameprot_M-pyrifera_M_contig88328.20513.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length91
Homology
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A7S4HHB6_9EUKA (UV excision repair protein RAD23 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHB6_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 4.510e-16
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPA 78
            MK+T+KTL QE+L +E + S  + E K+ I++K+ H  E Q+LIFAG+IL D  TI SY I E  FLV++V+KV+ PA
Sbjct:   10 MKITIKTLKQEQLTVEAEPSCKISELKEKIQEKYSHPSEAQRLIFAGKILDDAQTIESYKIQEKDFLVMMVKKVATPA 87          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A8H7Q915_9FUNG (UV excision repair protein RAD23 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q915_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 5.140e-16
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK 73
            MKLT KTL Q++  L++D ++SV + K+ IE+  GH V  QKLIF+G+IL DDNT+ASY+I E  FLV++V K
Sbjct:    1 MKLTFKTLQQKQFQLDVDEASSVADVKKKIEETQGHPVATQKLIFSGKILADDNTVASYNIGEKDFLVVMVSK 73          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A075ATB5_ROZAC (UV excision repair protein RAD23 n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075ATB5_ROZAC)

HSP 1 Score: 80.1 bits (196), Expect = 8.570e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPALAAVS 83
            MK+TL+TL Q+   LE++  ++V   K  IE  FGH V  QKLI++G+ILQDD TIASY++ E  F VL++ K    A AAVS
Sbjct:    1 MKITLRTLQQKSYPLEVEPESTVSTLKTKIEGDFGHPVASQKLIYSGQILQDDRTIASYNVKENDFFVLMITKAPMKAPAAVS 83          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1X2H463_SYNRA (UV excision repair protein RAD23 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H463_SYNRA)

HSP 1 Score: 77.4 bits (189), Expect = 9.960e-15
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPALAA 81
            MKLTLKTL Q++  LE+D++ +VL  KQ I+ + GHAVE QKLIF+G+IL +D  +   +I E  FLVL+V K    + AA
Sbjct:    4 MKLTLKTLQQKQFQLEVDSADTVLAVKQKIQDQEGHAVENQKLIFSGKILPNDKVVEECNIGEKDFLVLMVSKPKASSAAA 84          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A8H3ARM9_9AGAM (UV excision repair protein RAD23 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3ARM9_9AGAM)

HSP 1 Score: 76.3 bits (186), Expect = 2.610e-14
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPALAAVSLFT 86
            MK+T KTL Q++  ++ + S +VL+ KQ ++   GH VEQQKLI++G+IL DD T+ S  I E  FLV++V KVS   LA  S FT
Sbjct:   22 MKITFKTLQQKQFQIDAELSDTVLQLKQKVKDAQGHQVEQQKLIYSGKILSDDKTVESLGIKEKDFLVVMVSKVS---LATPSYFT 104          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1C7N6Y1_9FUNG (UV excision repair protein RAD23 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N6Y1_9FUNG)

HSP 1 Score: 75.9 bits (185), Expect = 3.600e-14
Identity = 35/73 (47.95%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK 73
            +KLT KTL Q++  L++D+S +++  K  IE+  G+A+ QQKLI++G+ILQDD  +  YDI E GF+V++V K
Sbjct:    4 LKLTFKTLQQKQFVLDVDSSDTIMSVKGKIEETQGYAIAQQKLIYSGKILQDDKMLGEYDIKEAGFVVVMVSK 76          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A0D0A586_9AGAM (UV excision repair protein RAD23 n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0A586_9AGAM)

HSP 1 Score: 75.9 bits (185), Expect = 3.620e-14
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK 73
            MKLT+KTL Q+   LE + S ++ + KQ I    GH+VE QKLIF+G+IL DD T+AS +I E  FLVL+V K
Sbjct:    1 MKLTIKTLQQKMFQLEAEGSETIADLKQKISNTQGHSVESQKLIFSGKILTDDKTVASCEIKEKDFLVLMVSK 73          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1B7NEJ8_9AGAM (UV excision repair protein RAD23 n=2 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7NEJ8_9AGAM)

HSP 1 Score: 75.5 bits (184), Expect = 4.930e-14
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSC----PALAAVSLFTP 87
            MKLT+KTL Q+   L+ + S ++ + KQ I    GH+V+ QKLIF+G++L DD T+AS +I E  FLVL+V K       P LA  S  TP
Sbjct:    1 MKLTIKTLQQKMFQLDAEGSETIGDLKQKISNTQGHSVDSQKLIFSGKVLSDDKTVASCEIKEKDFLVLMVSKPKAAAVQPPLATASTSTP 91          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1X2J2C4_9FUNG (UV excision repair protein RAD23 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2J2C4_9FUNG)

HSP 1 Score: 73.6 bits (179), Expect = 2.350e-13
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK--VSCPALAAVS 83
            MKLTLKTL QE+ +L+++AS ++L  K+ IE    H V  QKLIF+G+IL +  T+  Y I E  FLV++V K  V+ PA A  S
Sbjct:    1 MKLTLKTLQQEQFNLDVEASDTILSVKEKIESAKNHPVASQKLIFSGKILDNAKTVQDYSISEKDFLVVMVSKPKVTKPAAATQS 85          
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1X2IB46_9FUNG (UV excision repair protein RAD23 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB46_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 3.370e-13
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK--VSCPALAAVS 83
            M+LT+KTL QE+  LE++AS S+L  K+ I+    H VE QKLIF+G+IL +  T+  Y+I E  FLV+++ K  V+ PA+   S
Sbjct:    1 MQLTVKTLQQEQFKLEVEASDSILSVKEKIQNTKNHPVENQKLIFSGKILDNTKTVQDYNISEKDFLVVMISKPKVTKPAVTTSS 85          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HHB6_9EUKA4.510e-1651.28UV excision repair protein RAD23 n=1 Tax=Vannella ... [more]
A0A8H7Q915_9FUNG5.140e-1654.79UV excision repair protein RAD23 n=1 Tax=Umbelopsi... [more]
A0A075ATB5_ROZAC8.570e-1650.60UV excision repair protein RAD23 n=2 Tax=Rozella a... [more]
A0A1X2H463_SYNRA9.960e-1550.62UV excision repair protein RAD23 n=1 Tax=Syncephal... [more]
A0A8H3ARM9_9AGAM2.610e-1448.84UV excision repair protein RAD23 n=1 Tax=Rhizocton... [more]
A0A1C7N6Y1_9FUNG3.600e-1447.95UV excision repair protein RAD23 n=1 Tax=Choanepho... [more]
A0A0D0A586_9AGAM3.620e-1453.42UV excision repair protein RAD23 n=8 Tax=Suillus T... [more]
A0A1B7NEJ8_9AGAM4.930e-1446.15UV excision repair protein RAD23 n=2 Tax=Rhizopogo... [more]
A0A1X2J2C4_9FUNG2.350e-1348.24UV excision repair protein RAD23 n=1 Tax=Absidia r... [more]
A0A1X2IB46_9FUNG3.370e-1345.88UV excision repair protein RAD23 n=1 Tax=Absidia r... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 32..52
score: 50.31
coord: 11..31
score: 24.14
coord: 53..74
score: 28.17
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..72
e-value: 5.1E-18
score: 75.9
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 3..73
e-value: 3.6E-20
score: 71.5
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..73
score: 20.087
NoneNo IPR availableGENE3D3.10.20.90coord: 1..78
e-value: 7.7E-21
score: 75.6
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 1..73
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88328contigM-pyrifera_M_contig88328:414..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88328.20513.1mRNA_M-pyrifera_M_contig88328.20513.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88328 414..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88328.20513.1 ID=prot_M-pyrifera_M_contig88328.20513.1|Name=mRNA_M-pyrifera_M_contig88328.20513.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp
MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRIL
QDDNTIASYDIPETGFLVLLVRKVSCPALAAVSLFTPLTRT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf