mRNA_M-pyrifera_M_contig88328.20513.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A7S4HHB6_9EUKA (UV excision repair protein RAD23 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHB6_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 4.510e-16 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPA 234 MK+T+KTL QE+L +E + S + E K+ I++K+ H E Q+LIFAG+IL D TI SY I E FLV++V+KV+ PA Sbjct: 10 MKITIKTLKQEQLTVEAEPSCKISELKEKIQEKYSHPSEAQRLIFAGKILDDAQTIESYKIQEKDFLVMMVKKVATPA 87
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A8H7Q915_9FUNG (UV excision repair protein RAD23 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q915_9FUNG) HSP 1 Score: 80.9 bits (198), Expect = 5.140e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK 219 MKLT KTL Q++ L++D ++SV + K+ IE+ GH V QKLIF+G+IL DDNT+ASY+I E FLV++V K Sbjct: 1 MKLTFKTLQQKQFQLDVDEASSVADVKKKIEETQGHPVATQKLIFSGKILADDNTVASYNIGEKDFLVVMVSK 73
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A075ATB5_ROZAC (UV excision repair protein RAD23 n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075ATB5_ROZAC) HSP 1 Score: 80.1 bits (196), Expect = 8.570e-16 Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPALAAVS 249 MK+TL+TL Q+ LE++ ++V K IE FGH V QKLI++G+ILQDD TIASY++ E F VL++ K A AAVS Sbjct: 1 MKITLRTLQQKSYPLEVEPESTVSTLKTKIEGDFGHPVASQKLIYSGQILQDDRTIASYNVKENDFFVLMITKAPMKAPAAVS 83
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1X2H463_SYNRA (UV excision repair protein RAD23 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H463_SYNRA) HSP 1 Score: 77.4 bits (189), Expect = 9.960e-15 Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPALAA 243 MKLTLKTL Q++ LE+D++ +VL KQ I+ + GHAVE QKLIF+G+IL +D + +I E FLVL+V K + AA Sbjct: 4 MKLTLKTLQQKQFQLEVDSADTVLAVKQKIQDQEGHAVENQKLIFSGKILPNDKVVEECNIGEKDFLVLMVSKPKASSAAA 84
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A8H3ARM9_9AGAM (UV excision repair protein RAD23 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3ARM9_9AGAM) HSP 1 Score: 76.3 bits (186), Expect = 2.610e-14 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSCPALAAVSLFT 258 MK+T KTL Q++ ++ + S +VL+ KQ ++ GH VEQQKLI++G+IL DD T+ S I E FLV++V KVS LA S FT Sbjct: 22 MKITFKTLQQKQFQIDAELSDTVLQLKQKVKDAQGHQVEQQKLIYSGKILSDDKTVESLGIKEKDFLVVMVSKVS---LATPSYFT 104
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1C7N6Y1_9FUNG (UV excision repair protein RAD23 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N6Y1_9FUNG) HSP 1 Score: 75.9 bits (185), Expect = 3.600e-14 Identity = 35/73 (47.95%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK 219 +KLT KTL Q++ L++D+S +++ K IE+ G+A+ QQKLI++G+ILQDD + YDI E GF+V++V K Sbjct: 4 LKLTFKTLQQKQFVLDVDSSDTIMSVKGKIEETQGYAIAQQKLIYSGKILQDDKMLGEYDIKEAGFVVVMVSK 76
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A0D0A586_9AGAM (UV excision repair protein RAD23 n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0A586_9AGAM) HSP 1 Score: 75.9 bits (185), Expect = 3.620e-14 Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK 219 MKLT+KTL Q+ LE + S ++ + KQ I GH+VE QKLIF+G+IL DD T+AS +I E FLVL+V K Sbjct: 1 MKLTIKTLQQKMFQLEAEGSETIADLKQKISNTQGHSVESQKLIFSGKILTDDKTVASCEIKEKDFLVLMVSK 73
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1B7NEJ8_9AGAM (UV excision repair protein RAD23 n=2 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7NEJ8_9AGAM) HSP 1 Score: 75.5 bits (184), Expect = 4.930e-14 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRKVSC----PALAAVSLFTP 261 MKLT+KTL Q+ L+ + S ++ + KQ I GH+V+ QKLIF+G++L DD T+AS +I E FLVL+V K P LA S TP Sbjct: 1 MKLTIKTLQQKMFQLDAEGSETIGDLKQKISNTQGHSVDSQKLIFSGKVLSDDKTVASCEIKEKDFLVLMVSKPKAAAVQPPLATASTSTP 91
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1X2J2C4_9FUNG (UV excision repair protein RAD23 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2J2C4_9FUNG) HSP 1 Score: 73.6 bits (179), Expect = 2.350e-13 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK--VSCPALAAVS 249 MKLTLKTL QE+ +L+++AS ++L K+ IE H V QKLIF+G+IL + T+ Y I E FLV++V K V+ PA A S Sbjct: 1 MKLTLKTLQQEQFNLDVEASDTILSVKEKIESAKNHPVASQKLIFSGKILDNAKTVQDYSISEKDFLVVMVSKPKVTKPAAATQS 85
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Match: A0A1X2IB46_9FUNG (UV excision repair protein RAD23 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB46_9FUNG) HSP 1 Score: 73.2 bits (178), Expect = 3.370e-13 Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 1 MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILQDDNTIASYDIPETGFLVLLVRK--VSCPALAAVS 249 M+LT+KTL QE+ LE++AS S+L K+ I+ H VE QKLIF+G+IL + T+ Y+I E FLV+++ K V+ PA+ S Sbjct: 1 MQLTVKTLQQEQFKLEVEASDSILSVKEKIQNTKNHPVENQKLIFSGKILDNTKTVQDYNISEKDFLVVMISKPKVTKPAVTTSS 85 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88328.20513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88328.20513.1 >prot_M-pyrifera_M_contig88328.20513.1 ID=prot_M-pyrifera_M_contig88328.20513.1|Name=mRNA_M-pyrifera_M_contig88328.20513.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp MKLTLKTLSQEELHLEIDASASVLEAKQAIEKKFGHAVEQQKLIFAGRILback to top mRNA from alignment at M-pyrifera_M_contig88328:414..763+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88328.20513.1 ID=mRNA_M-pyrifera_M_contig88328.20513.1|Name=mRNA_M-pyrifera_M_contig88328.20513.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=350bp|location=Sequence derived from alignment at M-pyrifera_M_contig88328:414..763+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88328:414..763+ >mRNA_M-pyrifera_M_contig88328.20513.1 ID=mRNA_M-pyrifera_M_contig88328.20513.1|Name=mRNA_M-pyrifera_M_contig88328.20513.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig88328:414..763+ (Macrocystis pyrifera P11B4 male)back to top |