prot_M-pyrifera_M_contig88183.20482.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88183.20482.1
Unique Nameprot_M-pyrifera_M_contig88183.20482.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
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BLAST of mRNA_M-pyrifera_M_contig88183.20482.1 vs. uniprot
Match: A0A0L0DFZ7_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DFZ7_THETB)

HSP 1 Score: 89.7 bits (221), Expect = 4.950e-18
Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = 0 
Query:    4 ASEGAVILRGFRLDMHCNPDLQPVGDVCNSEGIWASFLEVNITDCG---ETSAGSLQCNAVFNMVRGCNPGCNSPIAPKPFNYVMSYDLFVYYTYVF----GAEVTAD-QVKASQNTDLGVVTKNVTTYGQSGFDQGTMAITGFSYDL--QQFGDIENLGRYLERLAYNVQDVRYKADEGSAAYS 178
            A+E AV+L GF L+M CNP LQP G+VCNS GIWA+ + V I +     + ++G L  +  F + R   P        KPFN+ M++D     T V     G  VT   +V+   +        +    G+ G   G + ITG+ + L  Q   +   LGRY E +A+ V+   Y    G+A+++
Sbjct:  110 AAEPAVLLGGFALNMSCNPALQPPGEVCNSNGIWATHIAVEIDNGSVVLDRASGVLHFDLAFELGRAWTPDKGGG---KPFNWRMTFDAVFDATIVLAAPAGGRVTPGARVELVSSLWAPSSAHSAAITGKPGVPAGEVGITGWGFSLVPQHANETSRLGRYFESIAFAVEKQVYAPTSGTASFA 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig88183.20482.1 vs. uniprot
Match: A0A0G4GDE3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GDE3_9ALVE)

HSP 1 Score: 68.6 bits (166), Expect = 2.330e-10
Identity = 46/180 (25.56%), Postives = 83/180 (46.11%), Query Frame = 0 
Query:    1 TRAASEGAVILRGFRLDMHCNPDLQPVGDVCNSEGIWASFLEVNITDCGETSAGSLQCNAVFNMVRGCNPGCNSPIAPKPFNYVMSYDLFVYYTYVFGAEVTADQVKASQNTDLGVVTKNVTTY-----GQSGFDQGTMAITGFSYDLQQFGDIENLGRYLERLAYNVQDVRYKADEGSA 175
            T++ +  A +LRG R+D+HCNP+ Q     C+S G W   +EV +    E           F   R   P   S    KP ++ + +++ VYYT   G +          +T    + +    +     G+ G  + T+ ++ F ++L++    + LGRY+E L ++V  V+ +  + SA
Sbjct:  144 TQSCTNFATVLRGLRIDIHCNPEAQGEKK-CHSNGAWPYKMEVGVEGDSEIE---------FTFGRAWTP---SKGGLKPMDWRLDFNVTVYYTSFCGEDAEFYSTLGPLHTASSEIHEPSAKWSEGIVGKEGCAESTLGVSRFGFELKETQKHKKLGRYIESLEFSVSSVKTEGAKTSA 310
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88183.20482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0L0DFZ7_THETB4.950e-1832.97Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A0G4GDE3_9ALVE2.330e-1025.56Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88183contigM-pyrifera_M_contig88183:9..596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88183.20482.1mRNA_M-pyrifera_M_contig88183.20482.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88183 9..596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88183.20482.1 ID=prot_M-pyrifera_M_contig88183.20482.1|Name=mRNA_M-pyrifera_M_contig88183.20482.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
TRAASEGAVILRGFRLDMHCNPDLQPVGDVCNSEGIWASFLEVNITDCGE
TSAGSLQCNAVFNMVRGCNPGCNSPIAPKPFNYVMSYDLFVYYTYVFGAE
VTADQVKASQNTDLGVVTKNVTTYGQSGFDQGTMAITGFSYDLQQFGDIE
NLGRYLERLAYNVQDVRYKADEGSAAYS
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