prot_M-pyrifera_M_contig86005.20045.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86005.20045.1
Unique Nameprot_M-pyrifera_M_contig86005.20045.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
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BLAST of mRNA_M-pyrifera_M_contig86005.20045.1 vs. uniprot
Match: A0A6P8QL54_GEOSA (VPS9 domain-containing protein 1 isoform X1 n=3 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8QL54_GEOSA)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-9
Identity = 31/106 (29.25%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:    1 YAKALGIFRTLLLQRTPRQKCATVAKALQAVCDAPLDHYRG---RLPPRKATMGTDELVDAFAFIVVQSHVTSLISQLGFIETFLPARLRIGADGFAVTNLHTAVS 103
            Y  A+   R L L++ P++K   + K L+ +C+   ++      +  P  A +G D+L+   +FIV++S +  L+S+   +E F+     IGA+G+ +T+L +A+S
Sbjct:  567 YKAAVEELRLLTLEQCPQKKLECIVKTLRVICECAEEYSNTEELKAQPNSAAIGADDLLPILSFIVLRSDLPQLVSECAALEEFIHEGYLIGAEGYCLTSLQSALS 672
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BLAST of mRNA_M-pyrifera_M_contig86005.20045.1 vs. uniprot
Match: A0A024U504_9STRA (VPS9 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U504_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.520e-7
Identity = 33/106 (31.13%), Postives = 53/106 (50.00%), Query Frame = 0 
Query:    1 YAKALGIFRTLLLQRTPRQKCATVAKALQAVCDAPLDHYRGRLPP---RKATMGTDELVDAFAFIVVQSHVTSLISQLGFIETFLPARLRIGADGFAVTNLHTAVS 103
            Y   +     L  QR+P  K A V++  + +      +Y G   P    +  +  D LV   A++VV ++   L S L  ++ FLP R+ IG + +AVT LHTA++
Sbjct:  314 YTNCITKMSELPHQRSPSAKVAVVSQVCRLIDVTIHTYYAGHPNPPPVEQLHIAADALVSVLAYVVVMANCPHLASHLALMDAFLPDRISIGEEAYAVTILHTAIA 419
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86005.20045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6P8QL54_GEOSA1.490e-929.25VPS9 domain-containing protein 1 isoform X1 n=3 Ta... [more]
A0A024U504_9STRA1.520e-731.13VPS9 domain-containing protein n=1 Tax=Aphanomyces... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003123VPS9 domainPFAMPF02204VPS9coord: 4..103
e-value: 4.8E-12
score: 46.0
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 1..103
score: 19.153
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80coord: 2..103
e-value: 2.4E-11
score: 45.5
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 3..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86005contigM-pyrifera_M_contig86005:543..851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86005.20045.1mRNA_M-pyrifera_M_contig86005.20045.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86005 543..851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86005.20045.1 ID=prot_M-pyrifera_M_contig86005.20045.1|Name=mRNA_M-pyrifera_M_contig86005.20045.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
YAKALGIFRTLLLQRTPRQKCATVAKALQAVCDAPLDHYRGRLPPRKATM
GTDELVDAFAFIVVQSHVTSLISQLGFIETFLPARLRIGADGFAVTNLHT
AVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
IPR037191VPS9_dom_sf