prot_M-pyrifera_M_contig84347.19670.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84347.19670.1
Unique Nameprot_M-pyrifera_M_contig84347.19670.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length162
Homology
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A7S4IJ08_9EUKA (Dynein light intermediate chain (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJ08_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 1.530e-36
Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = 0
Query:    2 HKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            H  LL+F+LNA+N+HKS ++ITLD+SKPW L  +L  WL  V++H+K L++       L+ K  +R+  Y EPEAGAKKK   I L A  +A +    D+      P I  E  L  NLG+P+VV CCK D +  L R+F  +D  F+++QQHLR+ICL
Sbjct:   38 HDSLLRFALNAENIHKSVILITLDFSKPWDLSHTLEAWLETVSNHIKGLRLTSKVLAPLRNKLIKRYHEYTEPEAGAKKKRRVIDLTASSSAVE---TDEEI----PTIEDENALTQNLGIPIVVACCKTDFVGTLERNFHFRDDEFEFIQQHLRKICL 189          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: D3B0Y6_POLPP (Dynein light intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B0Y6_POLPP)

HSP 1 Score: 112 bits (280), Expect = 3.650e-26
Identity = 64/159 (40.25%), Postives = 91/159 (57.23%), Query Frame = 0
Query:    2 HKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            H +LLKF+L A N+ +S +VI LD+S+PW + +SL +WL ++  H+KS+     K + LK K   ++  Y EP        +S S          P  D +      P L E +L  NLGLP++VVCCK D++  L + F  KD  FDY+QQ+LRRICL
Sbjct:   99 HNDLLKFALTANNIAQSMIVIALDFSQPWNIVDSLKKWLAILETHIKSITPQNEKRESLKDKVLIKWHQYVEPAQPNSSSILSASQKKKRKQVVTPIEDTSVL----PPLSENILISNLGLPILVVCCKSDSVVMLEKDFDYKDELFDYIQQYLRRICL 253          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A670YNG2_PSETE (Dynein light intermediate chain n=3 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670YNG2_PSETE)

HSP 1 Score: 107 bits (266), Expect = 4.900e-25
Identity = 61/160 (38.12%), Postives = 92/160 (57.50%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            +HK LLKF++ A++L ++ V+   D S+PW + ESL +W  V+ +H+  L++ P +   ++ +  + FQ Y EPE G          +       GP+  D    A P  LGE VL  NLG+PVVVVC K DAM+ L +    ++ HFD++Q H+RR CL
Sbjct:  110 YHKGLLKFAVTAESLQETLVIFVADMSRPWTILESLQKWASVLREHIDKLKIPPEEMRNMEQQFVKIFQEYVEPEGG----------YQGSPQRRGPSGQDEENIALP--LGENVLTHNLGIPVVVVCTKCDAMSVLEKEHDYREEHFDFIQSHIRRFCL 257          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: C3XTX4_BRAFL (Dynein light intermediate chain n=5 Tax=Branchiostoma TaxID=7737 RepID=C3XTX4_BRAFL)

HSP 1 Score: 108 bits (271), Expect = 8.670e-25
Identity = 59/162 (36.42%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICLTC 162
            HH+ LL+F+L+A+N+  + V++ +D S+PW + ESL +W  ++  H+  L++ P K   L+ +  +++Q Y EPE GA+      S   P+A   G   ++         LGE VL  NLG+PVVVV  K DA++ L +    ++ H D++QQH+R+ CL C
Sbjct:  104 HHRGLLRFALSAENIEHTLVMLAVDMSRPWTILESLQKWADIIHHHIDRLKVPPEKMKELEEQLVRQYQEYVEPEEGAQ------SPQRPKAMTPGAGEEETVVLP----LGEDVLTHNLGVPVVVVVTKTDAISTLEKEHDYREEHLDFIQQHIRKFCLRC 255          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: L5LI04_MYODS (Dynein light intermediate chain (Fragment) n=2 Tax=Laurasiatheria TaxID=314145 RepID=L5LI04_MYODS)

HSP 1 Score: 107 bits (266), Expect = 1.790e-24
Identity = 61/162 (37.65%), Postives = 95/162 (58.64%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICLTC 162
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P +   L+ K  + FQ Y EPE G +         +P+      +  D    A P  LG+ VL  NLG+PV+VVC K DA++ L +    +D HFD++Q HLRR CL C
Sbjct:   57 YHKGLLKFAVSAESLPETLVIFVADMSRPWAVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQ--------GSPQRRGPLTSGPDEENVALP--LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCLQC 208          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: UPI0006448ADE (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448ADE)

HSP 1 Score: 107 bits (268), Expect = 2.080e-24
Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    2 HKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSL-----QMLPSKTDLLKAKTQQRFQAYKE----PEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            H +LLKF+L   N+  S +VITLD+S+PW + +SL +WL +V  H+KS+     Q++    D L  K  Q  +  +     P   A+KK     +HAP         +D +     P LGE +L  NLG+PV+VVCCK D++  L + F  KD  FDY+QQ+LRRIC+
Sbjct:   99 HHDLLKFALTPDNIAHSMIVITLDFSQPWNIVDSLKKWLGIVESHIKSIGSSQKQLMKGLDDKLMIKWHQYVEPPQNSAAAPLTNAQKKKKRKVVHAP--------IEDISVL---PPLGEDILSHNLGVPVLVVCCKSDSVVMLEKDFDYKDDLFDYIQQYLRRICI 255          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: B4E2E0_HUMAN (Dynein light intermediate chain n=46 Tax=Boreoeutheria TaxID=1437010 RepID=B4E2E0_HUMAN)

HSP 1 Score: 103 bits (258), Expect = 3.960e-24
Identity = 60/160 (37.50%), Postives = 93/160 (58.13%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P K   L+ K  + FQ Y EPE G +         +P+      +  D    A P  LG+ VL  NLG+PV+VVC K DA++ L +    +D H D++Q HLRR CL
Sbjct:   75 YHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQ--------GSPQRRGPLTSGSDEENVALP--LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCL 224          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A7J7SHU8_RHIFE (Dynein light intermediate chain n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7SHU8_RHIFE)

HSP 1 Score: 105 bits (263), Expect = 4.220e-24
Identity = 61/160 (38.12%), Postives = 95/160 (59.38%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P +   L+ K  + FQ Y EPE G +    S     P   + GP  ++ A       LG+ VL  NLG+PV+VVC K DA++ L +    +D HFD++Q HLRR CL
Sbjct:  114 YHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRALERKFVKEFQDYVEPEEGCQ---GSPQRRGP--LSSGPDEENVALP-----LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCL 263          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: UPI0003D6EB8D (cytoplasmic dynein 1 light intermediate chain 2 isoform X4 n=3 Tax=Murinae TaxID=39107 RepID=UPI0003D6EB8D)

HSP 1 Score: 105 bits (263), Expect = 4.640e-24
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P +   L+ K  + FQ Y EPE G +         +P+      +  D  + A P  LG+ VL  NLG+PV+VVC K DAM+ L +    +D H D++Q HLRR CL
Sbjct:  114 YHKGLLKFAVSAESLRETLVIFVADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQ--------GSPQRRGPLTSGSDEDSVALP--LGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRRFCL 263          
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A851M211_CORCR (Dynein light intermediate chain (Fragment) n=1 Tax=Corythaeola cristata TaxID=103954 RepID=A0A851M211_CORCR)

HSP 1 Score: 102 bits (253), Expect = 5.220e-24
Identity = 58/160 (36.25%), Postives = 93/160 (58.13%), Query Frame = 0
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 160
            +HK LLKF+++A++L  + VV   D S+PW + ESL +W  V+ +H+  +++ P +   ++ K  + FQ Y EPE G +         +P+  A     D+  +      LGE VL  NLG+PV+VVC K DA++ L +    ++ HFD++Q H+RR CL
Sbjct:   57 YHKGLLKFAVSAESLQDTIVVFVADMSRPWTVMESLQKWASVLQEHIDKMKIPPEEMRDMEQKFIKEFQEYVEPEEGYQ--------GSPQRRATSAQEDEHVSLP----LGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCL 204          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IJ08_9EUKA1.530e-3645.28Dynein light intermediate chain (Fragment) n=1 Tax... [more]
D3B0Y6_POLPP3.650e-2640.25Dynein light intermediate chain n=1 Tax=Polysphond... [more]
A0A670YNG2_PSETE4.900e-2538.13Dynein light intermediate chain n=3 Tax=Pseudonaja... [more]
C3XTX4_BRAFL8.670e-2536.42Dynein light intermediate chain n=5 Tax=Branchiost... [more]
L5LI04_MYODS1.790e-2437.65Dynein light intermediate chain (Fragment) n=2 Tax... [more]
UPI0006448ADE2.080e-2439.88hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
B4E2E0_HUMAN3.960e-2437.50Dynein light intermediate chain n=46 Tax=Boreoeuth... [more]
A0A7J7SHU8_RHIFE4.220e-2438.13Dynein light intermediate chain n=1 Tax=Rhinolophu... [more]
UPI0003D6EB8D4.640e-2437.50cytoplasmic dynein 1 light intermediate chain 2 is... [more]
A0A851M211_CORCR5.220e-2436.25Dynein light intermediate chain (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022780Dynein family light intermediate chainPFAMPF05783DLICcoord: 2..161
e-value: 1.2E-35
score: 123.3
IPR008467Dynein 1 light intermediate chainPANTHERPTHR12688DYNEIN LIGHT INTERMEDIATE CHAINcoord: 2..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84347contigM-pyrifera_M_contig84347:174..829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84347.19670.1mRNA_M-pyrifera_M_contig84347.19670.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84347 174..829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84347.19670.1 ID=prot_M-pyrifera_M_contig84347.19670.1|Name=mRNA_M-pyrifera_M_contig84347.19670.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSL
QMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAAD
DAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDY
VQQHLRRICLTC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022780Dynein_light_int_chain
IPR008467Dynein1_light_intermed_chain